Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20753
         (722 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2DQI2 Cluster: Putative uncharacterized protein; n=2; ...    36   1.0  
UniRef50_Q7RJC0 Cluster: Putative uncharacterized protein PY0334...    33   5.4  

>UniRef50_A2DQI2 Cluster: Putative uncharacterized protein; n=2;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 422

 Score = 35.9 bits (79), Expect = 1.0
 Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
 Frame = -1

Query: 497 VGITFLDIFLSSFTTEV--YLK------MKNMSSFGGQWRVLRHYLSLTN-LNAEAEKLI 345
           VG+ F+++FL   ++E   Y K      +++++ +G    +L  Y  ++N  N E  +LI
Sbjct: 153 VGLEFVNLFLEKISSETNKYCKEISTIILESIALYGNDSSILLKYFPISNSTNEEITELI 212

Query: 344 QKIKP--VTPEQWESKLFLFYLFLNLES 267
            K+ P  +T E W+S   ++ L +N ES
Sbjct: 213 NKLSPSMITLELWKS--LIYKLGMNKES 238


>UniRef50_Q7RJC0 Cluster: Putative uncharacterized protein PY03343;
           n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY03343 - Plasmodium yoelii yoelii
          Length = 1684

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 19/70 (27%), Positives = 33/70 (47%)
 Frame = -1

Query: 401 VLRHYLSLTNLNAEAEKLIQKIKPVTPEQWESKLFLFYLFLNLES*CLIIFGIYFLKRKK 222
           +L+ +L +T  N   + +I    P+    + + L  FY   N+   C  +F  +F   KK
Sbjct: 430 ILKCFLEITKENXMYDNIIILFLPINFTAFFNILKNFYFSANISQYCFFLFFSHFSAEKK 489

Query: 221 IVDILEKVFW 192
           I+D    +FW
Sbjct: 490 IMD--SDLFW 497


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,750,462
Number of Sequences: 1657284
Number of extensions: 10506017
Number of successful extensions: 23490
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23487
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)