Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20752
         (709 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           25   0.60 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   1.1  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   4.3  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   5.6  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   7.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.4  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   7.4  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   7.4  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   9.8  

>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +3

Query: 9   EHTYIHDTHLFSNLRPIILYEQC 77
           EH Y H+  ++ +++   +YE C
Sbjct: 36  EHNYTHNNEMYHSVKEEPIYESC 58


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +2

Query: 164 KHLVQCYNRGCGQAFDPNDNEKDECRHHPG 253
           K++  C+  GCG+ +    + K   R H G
Sbjct: 312 KNIHSCHIPGCGKVYGKTSHLKAHLRWHTG 341


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +2

Query: 143 ITNMPEDKHLVQCYNRG 193
           + N+P DK+++Q +  G
Sbjct: 433 LENLPSDKYIIQIWTTG 449


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 4/27 (14%)
 Frame = +3

Query: 594 KNGGCNTA----FEGPQTNESLCTYHP 662
           K  GC++     FE P+ NE++   HP
Sbjct: 158 KKKGCSSEEVFQFECPKVNETVAATHP 184


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = +3

Query: 9   EHTYIHDTHLFSNLRPIILYEQC 77
           E  Y H+  ++  ++   +YE C
Sbjct: 36  EQNYTHNNEMYHRVKEEPIYESC 58


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 511 SLCVFLRAPEVFQRVVFVTVDQQLELLLQ*YPFFP 407
           +LC FL      QRVV  T+   L   ++ YP  P
Sbjct: 7   TLCAFLILTPTDQRVVTRTIPSFLRDDVERYPSGP 41


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = +3

Query: 9   EHTYIHDTHLFSNLRPIILYEQC 77
           E  Y H+  ++  ++   +YE C
Sbjct: 36  EQNYTHNNEMYHRVKEEPIYESC 58


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -3

Query: 596 FTTCSNSYISIFRDWSFL 543
           F   S  +++I ++WSF+
Sbjct: 132 FIIISKHWVTIMKEWSFM 149


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 236 CRHHPGLQYSTMLT 277
           CR H G  Y+T+ T
Sbjct: 85  CRFHQGASYNTLNT 98


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,000
Number of Sequences: 336
Number of extensions: 4210
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)