BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20752 (709 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_02_0325 + 7276650-7276770,7276979-7277055,7277146-7277188,727... 31 0.90 06_03_0022 - 15536811-15536899,15537485-15537664,15537706-155379... 28 8.4 04_03_0181 - 12327281-12328620,12330922-12331015,12331079-123311... 28 8.4 >09_02_0325 + 7276650-7276770,7276979-7277055,7277146-7277188, 7277276-7277333,7277922-7277991,7278202-7278670, 7278895-7278959 Length = 300 Score = 31.1 bits (67), Expect = 0.90 Identities = 16/51 (31%), Positives = 27/51 (52%) Frame = +3 Query: 519 KQSQPNTEQKTPVSEDGNVAIGTSCKNGGCNTAFEGPQTNESLCTYHPGCP 671 +++ P+T P SE + ++ NGG N A + PQ ++SL + P P Sbjct: 174 ERTDPSTP--APTSESPTQGVPSNRDNGGQNEATKSPQRDDSLSRHEPLTP 222 >06_03_0022 - 15536811-15536899,15537485-15537664,15537706-15537982, 15538680-15538883,15539431-15539496,15539933-15539953, 15541622-15541731,15543244-15544236,15544928-15544955, 15545035-15545093,15545177-15545204,15545453-15545475, 15545784-15545853,15546980-15547033,15547127-15547169, 15548126-15548175 Length = 764 Score = 27.9 bits (59), Expect = 8.4 Identities = 16/42 (38%), Positives = 19/42 (45%) Frame = +3 Query: 534 NTEQKTPVSEDGNVAIGTSCKNGGCNTAFEGPQTNESLCTYH 659 N Q + DG +G C+ GCN EG QT LC H Sbjct: 104 NMIQLNMCASDGRSVVGQRCQRLGCNNVVEG-QT--LLCKSH 142 >04_03_0181 - 12327281-12328620,12330922-12331015,12331079-12331183, 12331404-12332592,12333268-12333461 Length = 973 Score = 27.9 bits (59), Expect = 8.4 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = +3 Query: 507 SESLKQSQPNTEQKTPVSEDGNVAIGTSCKNGG 605 S+ +Q N E K SED +V +G NGG Sbjct: 364 SDIPEQQSKNEEVKESFSEDKDVVVGNELHNGG 396 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,279,914 Number of Sequences: 37544 Number of extensions: 405808 Number of successful extensions: 886 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 870 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 886 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1827423340 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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