Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20752
         (709 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   2.3  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   2.3  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   4.1  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   4.1  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   7.1  
AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    23   9.4  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = +2

Query: 194 CGQAFDPNDNEKDECR-HHPGLQ 259
           CGQ F   DN K  C+  HP L+
Sbjct: 928 CGQKFTRRDNMKAHCKVKHPELR 950


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 171  RCLSSGIFVIQ*IFYERRKNYPFCKYSNTG*Y 76
            R LSSG F+   + YE RK +   + +N   Y
Sbjct: 1830 RSLSSGFFIDNCLQYEARKGFAGAEANNAANY 1861


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/52 (23%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = +1

Query: 505 IVNH*NNLSQIQSKK-LQSLKMEM*LLEQVVKMVVVTQHLKVLKQMSLCAHI 657
           ++N  +++ Q++S+K L  + ++   +   +K  V+    +VLK++  C H+
Sbjct: 144 VINVFHHIKQVRSQKPLLPMILDQHYIN--LKSQVIKAERRVLKELGFCVHV 193


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = -1

Query: 226  FIVIW-VKSLATTAIITLH*VFIFRHIRYSIDILRT*KKLPLL 101
            F V+W +KS + T+I+    + +   +R S+D + T ++L +L
Sbjct: 994  FAVLWLIKSFSITSILFPLMLVVMIGVRKSLDYIFTKRELKIL 1036


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 45  NLRPIILYEQCITPYLSICKRGNFFYV 125
           N R +++YE+    +  + KR NFF V
Sbjct: 42  NNRALLIYERMGGSWSEVHKRNNFFAV 68


>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 386 LTGSTGFTLLCLDKVHPFMF 327
           LTG+  + L  LD+ HP +F
Sbjct: 249 LTGANRYDLFLLDEHHPQLF 268


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 790,513
Number of Sequences: 2352
Number of extensions: 16348
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)