Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20750
         (777 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        25   0.68 
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   4.8  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   4.8  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   4.8  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   4.8  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   4.8  
AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation facto...    21   8.3  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   8.3  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 16  TEGGNGPDAGQAPARLQHQCLSNCCRCGQNHPGSP 120
           +EG   P+   +  RL +  L N C+    + G+P
Sbjct: 522 SEGRQEPNMTDSLTRLANSALDNICQASDMYKGAP 556


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -3

Query: 190 HDRCTIV*YNRLSIVIYNQLVHTTGTQGGSDRIDNNL 80
           HD CT+  Y   S V   +LV       GSD + + +
Sbjct: 149 HDSCTVNNYQDASNVRNCELVGLADLNQGSDYVRSKI 185


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -3

Query: 190 HDRCTIV*YNRLSIVIYNQLVHTTGTQGGSDRIDNNL 80
           HD CT+  Y   S V   +LV       GSD + + +
Sbjct: 150 HDSCTVNNYQDASNVRNCELVGLADLNQGSDYVRSKI 186


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -3

Query: 190 HDRCTIV*YNRLSIVIYNQLVHTTGTQGGSDRIDNNL 80
           HD CT+  Y   S V   +LV       GSD + + +
Sbjct: 150 HDSCTVNNYQDASNVRNCELVGLADLNQGSDYVRSKI 186


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 440 SSGDLLSIFT-ACSLIFSMASLDAVLTALIRTRG*TPSSTN 321
           + G  LSI   +  ++FS  +   VL  +++ R  TPS  N
Sbjct: 49  NEGHQLSIIVYSILMVFSAIANTTVLVLIVKRRRKTPSRIN 89


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 440 SSGDLLSIFT-ACSLIFSMASLDAVLTALIRTRG*TPSSTN 321
           + G  LSI   +  ++FS  +   VL  +++ R  TPS  N
Sbjct: 49  NEGHQLSIIVYSILMVFSAIANTTVLVLIVKRRRKTPSRIN 89


>AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation factor
           1-alpha protein.
          Length = 56

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = -2

Query: 299 SPANITTEVVPSPTSHLETL 240
           +PANITTE V S   H E L
Sbjct: 32  APANITTE-VKSVEMHHEAL 50


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 468 INSDVIETDSSTEGHFSKIVVDAVLSLDTPLLPL 569
           I  D +E   S EG F + V+D + ++   LLP+
Sbjct: 111 IEWDKVEIVRSQEGRFEEAVIDYLFTV--YLLPI 142


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,554
Number of Sequences: 336
Number of extensions: 4141
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)