Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20750
(777 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 146 2e-36
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 87 4e-18
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 75 1e-14
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 73 5e-14
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 71 2e-13
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 71 2e-13
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 66 4e-12
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 51 2e-07
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 33 0.046
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 30 0.32
SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.56
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 26 5.2
SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|c... 26 5.2
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 26 6.9
SPAC1805.07c |dad2|hos2|DASH complex subunit Dad2|Schizosaccharo... 25 9.2
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 146 bits (355), Expect = 2e-36
Identities = 80/169 (47%), Positives = 103/169 (60%)
Frame = +1
Query: 256 EVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSP 435
EVGDGTTSVV+ AGE+L+ + FVE+GV ++IR R A++LA+ KIKE A+ +D
Sbjct: 93 EVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIKEIAIHLDLSDE 152
Query: 436 EEQRDLLLKCASTAMSSKLIHQQKATSXXXXXXXXXXXXXHFCLST*LESKRFPVELLKT 615
+ RDLL KCASTAM+SKLI + K+ P ++
Sbjct: 153 GKLRDLLTKCASTAMNSKLIRSNSTFFTKMVVDAVLTLDQEDLNENMIGIKKVPGGAMED 212
Query: 616 RSWYLVWAFKKTFSYAGFEMQPKTYKDCKIALLNIELELKAERDNAEVR 762
AFKKTFSYAGFE QPK +K+ KI L++ELELKAE+DNAEVR
Sbjct: 213 SLLVKGVAFKKTFSYAGFEQQPKFFKNPKILCLDVELELKAEKDNAEVR 261
Score = 129 bits (312), Expect = 4e-31
Identities = 59/85 (69%), Positives = 73/85 (85%)
Frame = +2
Query: 8 ILLLREGTDQTQGKPQLVSNINACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATI 187
+++L+EGTD +QG+ QL+SNINAC V D +RTTLGP G DKL+VD G+ VISNDGATI
Sbjct: 10 VIVLKEGTDDSQGRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDGATI 69
Query: 188 MKLLDIIHPAAKTLVDIAKSQDARL 262
MKLLDI+HPAAKTLVDIA++QDA +
Sbjct: 70 MKLLDIVHPAAKTLVDIARAQDAEV 94
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 86.6 bits (205), Expect = 4e-18
Identities = 41/75 (54%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Frame = +2
Query: 35 QTQGKPQLV--SNINACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDII 208
Q + KPQ V SNI A + V DA+RT+LGP+GMDK+I G+ +++NDGATI+K L ++
Sbjct: 12 QDREKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVL 71
Query: 209 HPAAKTLVDIAKSQD 253
HPAAK LVD++ +QD
Sbjct: 72 HPAAKMLVDLSAAQD 86
Score = 63.3 bits (147), Expect = 4e-11
Identities = 31/82 (37%), Positives = 54/82 (65%)
Frame = +1
Query: 256 EVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSP 435
E GDGTTSVVILAG +L + +++G+HP V+ + + A+ ++ +KE A+ I+
Sbjct: 88 EAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDCMKENALAIE---- 143
Query: 436 EEQRDLLLKCASTAMSSKLIHQ 501
R+ LL+ A+T+++SK++ Q
Sbjct: 144 LSDRESLLRAATTSLNSKIVSQ 165
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 74.9 bits (176), Expect = 1e-14
Identities = 33/84 (39%), Positives = 56/84 (66%)
Frame = +2
Query: 2 PQILLLREGTDQTQGKPQLVSNINACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGA 181
P ++ G Q K Q+ SNI A + V D +RT LGPR M K+++D G +++NDG
Sbjct: 4 PVFVMNTNGNRQVGHKAQM-SNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGH 62
Query: 182 TIMKLLDIIHPAAKTLVDIAKSQD 253
I++ +++ HPAAK+++++A++QD
Sbjct: 63 AILREIEVAHPAAKSMIELARTQD 86
Score = 58.8 bits (136), Expect = 8e-10
Identities = 30/78 (38%), Positives = 45/78 (57%)
Frame = +1
Query: 256 EVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSP 435
EVGDGTTSV+ILAGEIL P ++ +HP V+IR+ + A A+ I E + ++
Sbjct: 88 EVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEITLPVNVDDN 147
Query: 436 EEQRDLLLKCASTAMSSK 489
E L+ C T + ++
Sbjct: 148 AEMFRLIRTCIGTKLVAR 165
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 72.9 bits (171), Expect = 5e-14
Identities = 31/74 (41%), Positives = 50/74 (67%)
Frame = +2
Query: 32 DQTQGKPQLVSNINACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIH 211
++ G+ N+ A + + V+++LGP G+DK++VD G ++NDGATI+ LLD+ H
Sbjct: 15 EKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEH 74
Query: 212 PAAKTLVDIAKSQD 253
PA K LV++A+ QD
Sbjct: 75 PAGKVLVELAQQQD 88
Score = 58.4 bits (135), Expect = 1e-09
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 EVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKE-QAVKIDNKS 432
EVGDGTTSVVI+A E+L+R V+ +HP +I R A R A++ + + + +D+
Sbjct: 90 EVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFMTDVLSCSVDSLG 149
Query: 433 PEEQRDLLLKCASTAMSSKLI 495
E L+ A T+MSSK+I
Sbjct: 150 KES----LINVAKTSMSSKII 166
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 70.9 bits (166), Expect = 2e-13
Identities = 34/84 (40%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Frame = +2
Query: 14 LLREGTDQTQG-KPQLVSNINACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIM 190
L REG QG + ++ N NA + + + RT+LGP G +K++V+H + ++ND ATI+
Sbjct: 13 LFREGYRIMQGVEDAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATII 72
Query: 191 KLLDIIHPAAKTLVDIAKSQDARL 262
+ L++IHPAAK +VD + Q+ L
Sbjct: 73 RELEVIHPAAKLVVDATQQQENEL 96
Score = 35.9 bits (79), Expect = 0.006
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 EVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKE-QAVKIDNKS 432
E+GD VV+ GE+L + + + G+ P + + A +E ++E A KI+
Sbjct: 95 ELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEICADKIETVE 154
Query: 433 PEEQRDLLLKCASTAMSSK 489
E++ L+K T +SSK
Sbjct: 155 SEKE---LIKAIRTCISSK 170
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 70.5 bits (165), Expect = 2e-13
Identities = 32/78 (41%), Positives = 53/78 (67%)
Frame = +2
Query: 20 REGTDQTQGKPQLVSNINACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLL 199
+E + G + S+I A + V + VRT+LGPRG+DK+++ +G+ ++NDGATI+ +
Sbjct: 24 QEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQM 83
Query: 200 DIIHPAAKTLVDIAKSQD 253
++ H AK LV ++KSQD
Sbjct: 84 EVEHQIAKLLVQLSKSQD 101
Score = 53.2 bits (122), Expect = 4e-08
Identities = 26/80 (32%), Positives = 50/80 (62%)
Frame = +1
Query: 256 EVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSP 435
E+GDGTT VV+LAG +L++ + +++G+HP + A ++A++ + + +D SP
Sbjct: 103 EIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHLDAISDVVD-FSP 161
Query: 436 EEQRDLLLKCASTAMSSKLI 495
E + L + A T++ SK++
Sbjct: 162 ENTTN-LFRSAKTSLGSKVV 180
Score = 32.3 bits (70), Expect = 0.080
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +3
Query: 495 SSTEGHFSKIVVDAVLS---LDTPLLPLDMIGIKKVPGGALEDSFLVPGV 635
S HF+ I VDAVLS L + ++I + GG+++D+ LV GV
Sbjct: 181 SKAHDHFANIAVDAVLSVADLQRKDVDFELIKVDGKVGGSVDDTKLVKGV 230
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 66.5 bits (155), Expect = 4e-12
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Frame = +1
Query: 241 KVSRCEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKI 420
KV EVGDGTTSV + A E+L++ + V +HP+V+I R A++ AI+ ++ A I
Sbjct: 85 KVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTAIDALR--ASSI 142
Query: 421 DNKS-PEEQRDLLLKCASTAMSSKLIHQQK 507
DN S P + R L A T +SSK++ Q K
Sbjct: 143 DNSSDPAKFRSDLENIARTTLSSKILSQNK 172
Score = 63.7 bits (148), Expect = 3e-11
Identities = 33/81 (40%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = +2
Query: 14 LLREGTDQTQGKPQLVSNINACQIVVDAVRTTLGPRGMDKLIVDHN-GKAVISNDGATIM 190
+ E Q +G+ +S+ V D V++TLGP+GMDK++ ++ G V++NDGATI+
Sbjct: 8 IFNESGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATIL 67
Query: 191 KLLDIIHPAAKTLVDIAKSQD 253
K + + + AAK LV+I+K QD
Sbjct: 68 KSIALDNAAAKVLVNISKVQD 88
Score = 38.3 bits (85), Expect = 0.001
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +3
Query: 495 SSTEGHFSKIVVDAVLSLDTPLLPLDMIGIKKVPGGALEDSFLVPG 632
S + HF+++ VDAVL L LD I I K+ GG L+DSFL G
Sbjct: 169 SQNKNHFAQLAVDAVLRLKGST-NLDNIQIIKILGGKLDDSFLDEG 213
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 50.8 bits (116), Expect = 2e-07
Identities = 28/77 (36%), Positives = 46/77 (59%)
Frame = +1
Query: 262 GDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEE 441
GDGTTSV +L GE+LK+ + ++ EG+HP ++ A A+ + + K D E
Sbjct: 87 GDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFL--DSFKTDF---EV 141
Query: 442 QRDLLLKCASTAMSSKL 492
R++LL A T++S+K+
Sbjct: 142 DREVLLNVAKTSLSTKI 158
Score = 45.6 bits (103), Expect = 8e-06
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = +2
Query: 14 LLREGTDQTQGKPQLVSNINACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMK 193
LL + Q L NI+A + D +++ LGP G K++VD G ++ DG ++
Sbjct: 4 LLNPKAESIQRAQALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLT 63
Query: 194 LLDIIHPAAKTLVDIAKSQD 253
+ I +P A + A +QD
Sbjct: 64 EMQIQNPTASCIAKAATAQD 83
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 525 VVDAVLSLDTPLLPLD--MIGIKKVPGGALEDSFLVPGV 635
VVDA+L++ P P+D M+ I K+ + D+ L+ G+
Sbjct: 170 VVDAILTIRRPDEPIDLHMVEIMKMQNRSASDTQLIRGL 208
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 33.1 bits (72), Expect = 0.046
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +3
Query: 576 IGIKKVPGGALEDSFLVPGVGFQE 647
+ IKK+PGG+++D FLV GV F +
Sbjct: 525 VKIKKIPGGSIQDCFLVNGVLFSK 548
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 30.3 bits (65), Expect = 0.32
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 95 AVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDI 205
AV TLGP+G + LI G I+ DG T+ + + +
Sbjct: 57 AVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSL 93
Score = 28.3 bits (60), Expect = 1.3
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +1
Query: 262 GDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEE 441
GDGTT+ +L I V G +P L R ++ A +E + QA K D + EE
Sbjct: 117 GDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEFL--QANKRDITTSEE 174
>SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 29.5 bits (63), Expect = 0.56
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 590 LFDSNHVERQKWSVQRQDSINNNLREVAF 504
LFDSNHV+ QK +DS N L ++ F
Sbjct: 56 LFDSNHVDGQKGDSVLRDSANAPLTDLMF 84
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 26.2 bits (55), Expect = 5.2
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 328 EEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 462
E+ V +L RA +L I+ QA K DNKS E+R+ L+
Sbjct: 863 EKSVEENILARA---QYKLDIDGKVIQAGKFDNKSTPEEREAFLR 904
>SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|chr
1|||Manual
Length = 603
Score = 26.2 bits (55), Expect = 5.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -3
Query: 151 IVIYNQLVHTTGTQGGSDRIDNNL 80
++I+N LVH T T+ S+ + N+L
Sbjct: 503 LIIFNNLVHETDTETDSETLLNDL 526
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 25.8 bits (54), Expect = 6.9
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 313 LKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 462
L+ E+ + +L RA +L ++ QA K DNKS E+R+ L+
Sbjct: 1309 LRLITEKSIEENILSRA---QYKLDLDGKVIQAGKFDNKSTPEEREAFLR 1355
>SPAC1805.07c |dad2|hos2|DASH complex subunit
Dad2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 94
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 535 ASTTILEKWPSVDESVSMTS 476
A T+L WPS+ ES+ + S
Sbjct: 46 AVATVLNNWPSIFESIQIAS 65
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,249,796
Number of Sequences: 5004
Number of extensions: 68537
Number of successful extensions: 204
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 375345278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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