Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20750
(777 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 158 4e-39
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 79 4e-15
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 76 4e-14
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 75 5e-14
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 70 2e-12
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 69 3e-12
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 68 7e-12
10_08_0620 - 19321612-19323237 64 9e-11
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 64 9e-11
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 51 2e-08
06_02_0152 - 12316242-12316248,12316634-12316800,12317689-123178... 56 2e-08
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 52 7e-07
12_01_1011 + 10292709-10292765,10293003-10293156,10294062-102941... 37 0.021
03_06_0760 - 36067752-36068045,36068260-36068711,36069263-360695... 36 0.036
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 35 0.083
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 34 0.14
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 34 0.14
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238... 33 0.25
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 33 0.33
04_04_0185 - 23403479-23403868,23404018-23404023 32 0.58
02_04_0554 - 23831212-23832163,23833173-23833438,23833694-238337... 29 4.1
12_02_1213 + 27058329-27058370,27058634-27058711,27058807-270589... 29 5.4
12_01_0367 - 2783507-2784490 28 9.5
09_06_0364 + 22554082-22554225,22554306-22554520,22554671-225547... 28 9.5
08_02_0456 - 17362080-17364156,17364853-17364942,17372615-173733... 28 9.5
03_05_1085 + 30275567-30276178,30277024-30278680,30278835-30278968 28 9.5
02_03_0362 + 18158975-18159337 28 9.5
01_06_1742 - 39585879-39585994,39586089-39586238,39586288-395863... 28 9.5
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 158 bits (384), Expect = 4e-39
Identities = 86/169 (50%), Positives = 110/169 (65%)
Frame = +1
Query: 256 EVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSP 435
EVGDGTT+VV+LA E LK KP++E+GVHP LIR+ RTA LAIEK+K+ A I+ KS
Sbjct: 92 EVGDGTTTVVLLAAEFLKEAKPYIEDGVHPHSLIRSYRTAGHLAIEKVKDLATSIEGKSL 151
Query: 436 EEQRDLLLKCASTAMSSKLIHQQKATSXXXXXXXXXXXXXHFCLST*LESKRFPVELLKT 615
EE+++LL KCA+T +SSKLI +K L+ L K+ P ++
Sbjct: 152 EEKKELLAKCAATTLSSKLIGGEKEFFASMVVDAVLAISNDDRLNL-LGIKKVPGGTMRD 210
Query: 616 RSWYLVWAFKKTFSYAGFEMQPKTYKDCKIALLNIELELKAERDNAEVR 762
AFKKTFSYAGFE QPK + KI LLNIELELK+E++NAE+R
Sbjct: 211 SFLVNGVAFKKTFSYAGFEQQPKKFLSPKILLLNIELELKSEKENAEIR 259
Score = 138 bits (333), Expect = 6e-33
Identities = 65/87 (74%), Positives = 74/87 (85%)
Frame = +2
Query: 2 PQILLLREGTDQTQGKPQLVSNINACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGA 181
PQI+LL+EGTD +QG+ Q+VSNINAC +V D VRTTLGPRGMDKLI D G ISNDGA
Sbjct: 7 PQIILLKEGTDTSQGRAQVVSNINACTVVADTVRTTLGPRGMDKLIHDDKGGTTISNDGA 66
Query: 182 TIMKLLDIIHPAAKTLVDIAKSQDARL 262
TIM+LLDIIHPAAK LVDIAKSQD+ +
Sbjct: 67 TIMRLLDIIHPAAKILVDIAKSQDSEV 93
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 79.0 bits (186), Expect = 4e-15
Identities = 33/82 (40%), Positives = 58/82 (70%)
Frame = +2
Query: 8 ILLLREGTDQTQGKPQLVSNINACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATI 187
+L+L++ + G +NI A + V D +RTTLGPR M K+++D +G V++NDG I
Sbjct: 7 VLVLKDSLKRESGTKVHHANIQAAKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAI 66
Query: 188 MKLLDIIHPAAKTLVDIAKSQD 253
++ +DI HPAAK++++++++QD
Sbjct: 67 LREIDIAHPAAKSMIELSRTQD 88
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/56 (42%), Positives = 37/56 (66%)
Frame = +1
Query: 256 EVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKID 423
EVGDGTTSV++LAGE+L + F+++ HP V+ RA A A+ + + A+ +D
Sbjct: 90 EVGDGTTSVIVLAGEMLHVAEAFIDKHYHPTVICRAYTKALEDALAVLDKIAMHVD 145
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 576 IGIKKVPGGALEDSFLVPGVGFQEN 650
I ++KVPGG LEDS ++ GV F ++
Sbjct: 200 IKVEKVPGGQLEDSRVLKGVMFNKD 224
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 75.8 bits (178), Expect = 4e-14
Identities = 32/82 (39%), Positives = 57/82 (69%)
Frame = +2
Query: 8 ILLLREGTDQTQGKPQLVSNINACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATI 187
+L+L++ + G +NI A + V D +RTTLGP+ M K+++D G V++NDG I
Sbjct: 7 VLVLKDSLKRESGTKVHHANIQAAKAVADIIRTTLGPQSMLKMLLDAAGGIVVTNDGNCI 66
Query: 188 MKLLDIIHPAAKTLVDIAKSQD 253
++ LD+ HPAAK++++++++QD
Sbjct: 67 LRELDLAHPAAKSMIELSRTQD 88
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/56 (42%), Positives = 37/56 (66%)
Frame = +1
Query: 256 EVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKID 423
EVGDGTTSV++LAGE+L + F+++ HP V+ RA A A+ + + A+ +D
Sbjct: 90 EVGDGTTSVIVLAGEMLHVAQAFIDKNYHPTVICRAYTKALDDALSVLDKIAIPVD 145
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 576 IGIKKVPGGALEDSFLVPGV 635
I ++KVPGG LEDS ++ GV
Sbjct: 200 IKVEKVPGGQLEDSKVLKGV 219
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 75.4 bits (177), Expect = 5e-14
Identities = 33/64 (51%), Positives = 48/64 (75%)
Frame = +2
Query: 65 NINACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIAK 244
NI A + V DAVRT+LGPRGMDK+I + +I+NDGATI+ + ++ PAA+ L ++++
Sbjct: 31 NIAAARAVADAVRTSLGPRGMDKMISSGEQEVIITNDGATILSRMSLLQPAARMLAELSR 90
Query: 245 SQDA 256
SQDA
Sbjct: 91 SQDA 94
Score = 60.5 bits (140), Expect = 1e-09
Identities = 31/80 (38%), Positives = 48/80 (60%)
Frame = +1
Query: 262 GDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEE 441
GDGTT+VV+LAG +L+R + + G HP A+ + A+E + A+ I+
Sbjct: 97 GDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHRLATRAVEVLHAMAIPIE----LS 152
Query: 442 QRDLLLKCASTAMSSKLIHQ 501
RD L+K ASTA++SK++ Q
Sbjct: 153 DRDSLVKSASTALNSKVVSQ 172
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/84 (39%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +2
Query: 14 LLREGTDQTQGKPQLV-SNINACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIM 190
+L+EG G + V NI+AC+ + RT+LGP GM+K++++H K ++ND ATI+
Sbjct: 9 MLKEGHKHLSGLDEAVLKNIDACRELSAITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 68
Query: 191 KLLDIIHPAAKTLVDIAKSQDARL 262
L++ HPAAK LV ++Q +
Sbjct: 69 NELEVQHPAAKILVLAGRAQQEEI 92
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/83 (22%), Positives = 40/83 (48%)
Frame = +1
Query: 256 EVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSP 435
E+GDG + AGE+L++ + + G+HP +I A +E +++ K
Sbjct: 91 EIGDGANLTISFAGELLEKAEELIRMGLHPSEIIIGYTKAINKTVEILEDLVEKGSENMD 150
Query: 436 EEQRDLLLKCASTAMSSKLIHQQ 504
++ ++ +A++SK Q+
Sbjct: 151 VRNKEEVVLLMRSAVASKQFGQE 173
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 69.3 bits (162), Expect = 3e-12
Identities = 36/82 (43%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Frame = +2
Query: 14 LLREGTDQTQGKPQLVSNINACQIVVDAVRTTLGPRGMDKLIVDHN-GKAV-ISNDGATI 187
LL++ + +G+ +++ + D V+TTLGP+GMDK++ G++V ++NDGATI
Sbjct: 5 LLKDDATEEKGERARMASFVGGMAISDLVKTTLGPKGMDKILQSTGRGRSVTVTNDGATI 64
Query: 188 MKLLDIIHPAAKTLVDIAKSQD 253
+K L I +PAAK LVDI+K QD
Sbjct: 65 LKSLHIDNPAAKVLVDISKVQD 86
Score = 46.4 bits (105), Expect = 3e-05
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = +1
Query: 241 KVSRCEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLI 357
KV EVGDGTTSVV+LAGE+L+ + V +HP +I
Sbjct: 83 KVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTII 121
Score = 31.9 bits (69), Expect = 0.58
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +3
Query: 495 SSTEGHFSKIVVDAVLSLDTPLLPLDMIGIKKVPGGALEDSFLVPG 632
S + +F+ + VDAVL L L+ I I K GG+L+DSFL G
Sbjct: 143 SQDKEYFAGLAVDAVLRLKGST-NLEAIQILKKTGGSLKDSFLDEG 187
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 68.1 bits (159), Expect = 7e-12
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Frame = +2
Query: 14 LLREGTDQTQGKPQLVSNINACQIVVDAVRTTLGPRGMDKLIVDHN-GKAV-ISNDGATI 187
+L++ + +G+ ++ + D V+TTLGP+GMDK++ G++V ++NDGATI
Sbjct: 4 VLKDDAVEEKGERARMAAFIGAMAIADLVKTTLGPKGMDKILQSTGRGRSVTVTNDGATI 63
Query: 188 MKLLDIIHPAAKTLVDIAKSQD 253
+K L I +PAAK LVDI+K QD
Sbjct: 64 LKSLHIDNPAAKVLVDISKVQD 85
Score = 63.7 bits (148), Expect = 2e-10
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Frame = +1
Query: 241 KVSRCEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKI 420
KV EVGDGTTSVV+LAGE+L+ + V +HP +I R A A + E+ +
Sbjct: 82 KVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIAGYRMAVECARNALLERT--M 139
Query: 421 DNK-SPEEQRDLLLKCASTAMSSKLIHQQK 507
DNK + ++ R L+ A T +SSK++ Q K
Sbjct: 140 DNKENIDKFRSDLMNIAMTTLSSKILSQDK 169
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +3
Query: 495 SSTEGHFSKIVVDAVLSLDTPLLPLDMIGIKKVPGGALEDSFLVPG 632
S + +F+++ VDAVL L L+ I I K+PGG+L+DSFL G
Sbjct: 166 SQDKEYFAELAVDAVLRLKGST-NLEAIQILKIPGGSLKDSFLDEG 210
>10_08_0620 - 19321612-19323237
Length = 541
Score = 64.5 bits (150), Expect = 9e-11
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Frame = +2
Query: 65 NINACQIVVDAVRTTLGPRGMDKLIVDHNG----KAVISNDGATIMKLLDIIHPAAKTLV 232
NI A + V A RT+LGPRGMDK+I + +I+NDGATI+ + ++ PAA+ L
Sbjct: 31 NIAAGRAVAAAARTSLGPRGMDKMISSSSSGGDQAVIITNDGATILSRMPLLQPAARMLA 90
Query: 233 DIAKSQDA 256
D+++SQDA
Sbjct: 91 DLSRSQDA 98
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/80 (37%), Positives = 48/80 (60%)
Frame = +1
Query: 262 GDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEE 441
GDGTT+VV+LAG +L+R + + G HP A+ + A+E + A+ ++
Sbjct: 101 GDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHLLAARAVEVLHGMAIPVE----LS 156
Query: 442 QRDLLLKCASTAMSSKLIHQ 501
RD L+K ASTA++SK++ Q
Sbjct: 157 DRDALVKSASTALNSKVVSQ 176
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 64.5 bits (150), Expect = 9e-11
Identities = 32/82 (39%), Positives = 53/82 (64%)
Frame = +2
Query: 8 ILLLREGTDQTQGKPQLVSNINACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATI 187
IL +E + +G +NI A + V +RT+LGP+GMDK++ +G I+NDGATI
Sbjct: 14 ILREQEKKSRLRGLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATI 73
Query: 188 MKLLDIIHPAAKTLVDIAKSQD 253
++ +D+ + AK +V+++ SQD
Sbjct: 74 LEQMDVDNQIAKLMVELSCSQD 95
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/86 (31%), Positives = 52/86 (60%)
Frame = +1
Query: 256 EVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSP 435
E+GDGTT VV++AG +L++ + +E G+HP + ASR+A + ++ + K + +
Sbjct: 97 EIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYELASRIAFDHLEHISHKFEFSAT 156
Query: 436 EEQRDLLLKCASTAMSSKLIHQQKAT 513
+ L++ T +SSK++++ K T
Sbjct: 157 NIEP--LVQTCMTTLSSKIVNRCKRT 180
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 468 INSDVIETDSSTEGHFSKIVVDAVLSLDTPLLPLDMIGIKKVPGGALEDSFLVPGV 635
++S ++ T + V AV L+ + LD+I ++ GG LED+ LV G+
Sbjct: 169 LSSKIVNRCKRTLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELVYGI 224
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 51.2 bits (117), Expect = 9e-07
Identities = 21/40 (52%), Positives = 32/40 (80%)
Frame = +2
Query: 134 LIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIAKSQD 253
++VD G I+NDGATI+++L++ HPAAK LV++A+ QD
Sbjct: 1 MLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQD 40
Score = 44.8 bits (101), Expect(2) = 2e-08
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +1
Query: 256 EVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVR 369
EVGDGTTSVVI+A E+LKR V +HP +I R
Sbjct: 42 EVGDGTTSVVIIAAELLKRGNDLVRNKIHPTSIISGYR 79
Score = 31.5 bits (68), Expect(2) = 2e-08
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +1
Query: 361 AVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIH 498
A+R A + EK+ AVK+D +D L+ CA T+MSSKLI+
Sbjct: 109 AMREACKYVEEKL---AVKVDKLG----KDSLINCAKTSMSSKLIN 147
>06_02_0152 -
12316242-12316248,12316634-12316800,12317689-12317800,
12317930-12317999,12318535-12318535,12318791-12319144
Length = 236
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = +1
Query: 628 LVWAFKKTFSYAGFEMQPKTYKDCKIALLNIELELKAERDNAEVR 762
+V + ++ FSYAGFE QPK + KI LLNIE ELK E++NAE+R
Sbjct: 191 MVLSSRRHFSYAGFEQQPKKFVSPKIRLLNIEQELKYEKENAEIR 235
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 51.6 bits (118), Expect = 7e-07
Identities = 25/77 (32%), Positives = 43/77 (55%)
Frame = +1
Query: 262 GDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEE 441
GDGTTS V+ GE++K+ + ++EG HPR L+ A R +E +++ + E
Sbjct: 88 GDGTTSTVLFIGELMKQSERCIDEGTHPRFLVDGFDVAKRATLEFLEKFKTSV-VMGDEP 146
Query: 442 QRDLLLKCASTAMSSKL 492
R++L A T + +K+
Sbjct: 147 DREILKMIARTTLRTKV 163
Score = 48.0 bits (109), Expect = 8e-06
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +2
Query: 65 NINACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIAK 244
NINA + + D ++T LGP+G K++V G ++ DG T++K + I +P A + A
Sbjct: 22 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAV 81
Query: 245 SQD 253
+QD
Sbjct: 82 AQD 84
>12_01_1011 +
10292709-10292765,10293003-10293156,10294062-10294183,
10294288-10294495,10294644-10294789,10294920-10295226,
10295666-10296117,10296388-10296678
Length = 578
Score = 36.7 bits (81), Expect = 0.021
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +2
Query: 86 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHP 214
+ +AV TLGPRG + +++D G + NDG TI + +++ P
Sbjct: 59 LANAVGVTLGPRGRN-VVLDEYGSPKVVNDGVTIARAIELYDP 100
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +1
Query: 262 GDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQA 411
GDGTT+ +LA EI+K V G +P L + + IE+++++A
Sbjct: 121 GDGTTTASVLAREIIKLGLLSVTSGANPVSLKKGIDKTVHGLIEELEKKA 170
>03_06_0760 -
36067752-36068045,36068260-36068711,36069263-36069569,
36069719-36069864,36069989-36070196,36070339-36070460,
36070621-36070789,36070875-36070931
Length = 584
Score = 35.9 bits (79), Expect = 0.036
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 95 AVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHP 214
AV TLGPRG + +++D G + NDG TI + +++ P
Sbjct: 67 AVAVTLGPRGRN-VVLDEFGSPKVVNDGVTIARAIELADP 105
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +1
Query: 262 GDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQA 411
GDGTT+ +LA EI+K V G +P + + + +E++++++
Sbjct: 126 GDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVHSLVEELEKKS 175
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 34.7 bits (76), Expect = 0.083
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 71 NACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHP 214
N + D V TLGP+G + ++ G I NDG T+ K +++ P
Sbjct: 70 NGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDP 117
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/55 (21%), Positives = 31/55 (56%)
Frame = +1
Query: 262 GDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDN 426
GDGTT+ V+LA ++ V G +P + R + ++ + ++++ + ++++
Sbjct: 138 GDGTTTSVVLAQGMITEGVKVVAAGANPVQITRGIEKTAKALVSELQKMSKEVED 192
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 259 VGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNK 429
VGDGTT+ +ILA EI+ V G +P L + + A I +K + + + K
Sbjct: 647 VGDGTTTAIILAREIINLGLLAVATGANPVALRKGIDKAVHELIGILKTKCIPVSTK 703
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/55 (25%), Positives = 32/55 (58%)
Frame = +1
Query: 262 GDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDN 426
GDGTT+ V+LA ++ V G +P + R + ++ +E++K+ + ++++
Sbjct: 142 GDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVEELKKLSKEVED 196
Score = 32.3 bits (70), Expect = 0.44
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 86 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHP 214
+ D V TLGP+G + ++ G I NDG T+ + +++ P
Sbjct: 79 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP 121
>03_01_0305 -
2383187-2383298,2383606-2383684,2383762-2383867,
2383941-2384044,2384141-2384240,2384533-2384628,
2384724-2384801,2385355-2385423,2385511-2385591,
2385670-2385759,2385859-2385945,2386022-2386126,
2386591-2386686,2386796-2386971,2387225-2387384,
2387898-2388029,2388236-2388260,2389023-2389174
Length = 615
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 86 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLD 202
+ DAV+ T+GP+G +I G ++ DG T+ K ++
Sbjct: 92 LADAVKVTMGPKGRTVVIEQSFGAPKVTKDGVTVAKSIE 130
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +2
Query: 86 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIAK 244
+ DAV+ T+GP+G + +I + ++ DG T+ K ++ A ++ K
Sbjct: 139 LADAVKVTMGPKGRNVIIERSHRAPKVTKDGVTVAKSIEFEDSAKNVGANLVK 191
>04_04_0185 - 23403479-23403868,23404018-23404023
Length = 131
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = +1
Query: 211 PCR*DSCGYCKVSRCEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLI----RAVRTAS 378
PC D C + DG S+ I G+ RL+ V +GV L+ + VR A
Sbjct: 12 PC--DGCRVKALGVAAKADGVISMAI-TGDDRDRLE-VVGDGVDVTCLVTCLRKKVRFAD 67
Query: 379 RLAIEKIKEQAVKIDNKSPEEQR 447
L +E++K++ + + K PEE++
Sbjct: 68 VLQVEEVKDKKPEEEKKKPEEEK 90
>02_04_0554 -
23831212-23832163,23833173-23833438,23833694-23833748,
23834384-23834436,23834512-23834588,23834730-23834862,
23834958-23835098,23835840-23835960,23836137-23836242,
23836523-23836592,23836716-23836885,23837253-23837277,
23837662-23837777,23838926-23839217
Length = 858
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 56 LVSNINACQIVVDAVRTTLGPRGMDKLIVDHNGKAV 163
L AC +++ + T+G G + +V HNG+A+
Sbjct: 314 LYEGSTACVVIIRGNQITVGNVGDSRCVVSHNGQAI 349
>12_02_1213 +
27058329-27058370,27058634-27058711,27058807-27058974,
27059834-27059882,27060084-27060157,27060692-27060785,
27060924-27061003,27061311-27061322
Length = 198
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/78 (24%), Positives = 29/78 (37%)
Frame = +2
Query: 35 QTQGKPQLVSNINACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHP 214
Q QG P + + + D V P K NG + T + + D+ H
Sbjct: 110 QAQGNPNTIMALAGNK--ADMVEARQVPAEEAKTYAQENGLFFMETSAKTAINVNDVFHE 167
Query: 215 AAKTLVDIAKSQDARLAM 268
AK L+ ++QD M
Sbjct: 168 IAKRLLQGQQAQDTPAGM 185
>12_01_0367 - 2783507-2784490
Length = 327
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
Frame = +3
Query: 459 EVCINSDVIETDSSTEGHF-SKIVVDAVL----SLDTPLLPLDM 575
EVC+ S V+ETD+S+E S VDA++ S P+ P ++
Sbjct: 134 EVCLMSRVVETDASSEWFLGSPFRVDALVQEGFSAPAPITPAEL 177
>09_06_0364 +
22554082-22554225,22554306-22554520,22554671-22554752,
22554976-22555371,22555553-22556293,22556420-22556551,
22556981-22557367
Length = 698
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 115 SPWYGQADCRSQWKGGYIKRWCNDHEATGYHSP 213
S W A C SQ G + W N +E TG H P
Sbjct: 480 SAWPTDAGCTSQ-AGSVNESWDNANEGTGSHVP 511
>08_02_0456 -
17362080-17364156,17364853-17364942,17372615-17373318,
17373421-17373451,17374366-17374448,17374517-17374640,
17376427-17376560
Length = 1080
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 687 CLRLHLKASVTESFLESPHQVPGTSLQEL 601
CL +H+ + + F++ P P SLQEL
Sbjct: 875 CLTIHISSVSADDFIQEPWCPPPLSLQEL 903
>03_05_1085 + 30275567-30276178,30277024-30278680,30278835-30278968
Length = 800
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -3
Query: 601 PPGTFLIPIMSRGRSGVSKDRTASTTILEKW 509
PP F I M+R R G R TT+ +W
Sbjct: 472 PPTVFFIQFMTRYRHGDGSYRLRVTTVARRW 502
>02_03_0362 + 18158975-18159337
Length = 120
Score = 27.9 bits (59), Expect = 9.5
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = +1
Query: 25 GNGPDAGQAPARLQHQCLSNCCRCGQNHPGSPWYGQADCR-SQWKGGYIKRWCNDHEATG 201
G G D Q PA + C CG GS G+ DC ++W G C +G
Sbjct: 26 GGGGDGRQLPAASRWDARPRCATCG----GS---GRVDCLCNRWSDG--DSGCRTCAGSG 76
Query: 202 YHSPCR*DSCG 234
PCR SCG
Sbjct: 77 -RMPCR--SCG 84
>01_06_1742 - 39585879-39585994,39586089-39586238,39586288-39586375,
39586479-39586640,39586753-39586877,39586992-39587030,
39587290-39587476,39587643-39587713,39589371-39589564,
39589656-39589767,39589899-39590082,39590177-39590503,
39590780-39591061,39591148-39591621,39591730-39591813,
39591850-39591939,39592024-39592247,39592503-39592600,
39592679-39593169,39593249-39593520,39594266-39594522,
39594672-39594890,39595007-39595167,39595249-39595441,
39595528-39595633,39595947-39596121,39596404-39596556,
39596663-39596794,39597120-39597184,39597754-39597819,
39598433-39598511,39598587-39598767,39598864-39598976
Length = 1889
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -1
Query: 138 ISLSIPRGPRVVLTASTTI*QALMLETSWGLPCVWSV 28
+S +P+GP+V+ +I A++L+T L VW +
Sbjct: 1296 LSDGLPKGPKVLGDIVESIAGAILLDTKLDLDVVWGI 1332
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,022,086
Number of Sequences: 37544
Number of extensions: 491104
Number of successful extensions: 1557
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1552
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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