BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20750 (777 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086) 144 5e-35 SB_3351| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 7e-23 SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 69 3e-12 SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 69 6e-12 SB_57454| Best HMM Match : DUF924 (HMM E-Value=1) 66 4e-11 SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8) 62 5e-10 SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09 SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08 SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08 SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15) 41 0.001 SB_49248| Best HMM Match : Cpn60_TCP1 (HMM E-Value=1.6) 35 0.064 SB_29096| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0 SB_6378| Best HMM Match : Keratin_B2 (HMM E-Value=0.1) 30 1.8 SB_3214| Best HMM Match : Keratin_B2 (HMM E-Value=0.096) 30 1.8 SB_53400| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2 SB_48461| Best HMM Match : zf-CCHC (HMM E-Value=0.0016) 29 4.2 SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14) 29 5.5 SB_41690| Best HMM Match : DSL (HMM E-Value=0) 28 7.3 SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23) 28 7.3 SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35) 28 9.7 SB_5496| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7 SB_57323| Best HMM Match : ShTK (HMM E-Value=0) 28 9.7 SB_18362| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7 >SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086) Length = 724 Score = 144 bits (350), Expect = 5e-35 Identities = 68/85 (80%), Positives = 76/85 (89%) Frame = +2 Query: 2 PQILLLREGTDQTQGKPQLVSNINACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGA 181 P I+LL+EGTD +QG PQL+SNI+ACQ + DAVRTTLGPRGMDKLIVD GKA ISNDGA Sbjct: 639 PGIILLKEGTDASQGIPQLISNIDACQFIADAVRTTLGPRGMDKLIVDGRGKATISNDGA 698 Query: 182 TIMKLLDIIHPAAKTLVDIAKSQDA 256 TI+ LLDI+HPAAKTLVDIAKSQDA Sbjct: 699 TIINLLDIVHPAAKTLVDIAKSQDA 723 >SB_3351| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 175 Score = 104 bits (250), Expect = 7e-23 Identities = 62/126 (49%), Positives = 74/126 (58%) Frame = +1 Query: 385 AIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKATSXXXXXXXXXXXXXHFC 564 AI++IKE AV + E R LL +CA+TA+SSKLI QK Sbjct: 1 AIKRIKELAVHVKKNDAGEMRQLLERCAATALSSKLIATQKEFFAKMVVDAVMMLDELLP 60 Query: 565 LST*LESKRFPVELLKTRSWYLVWAFKKTFSYAGFEMQPKTYKDCKIALLNIELELKAER 744 L + K+ L+ AFKKTFSYAGFEMQPKTY CKIALLN+ELELKAE+ Sbjct: 61 LDM-IGMKKVSGGALEDSMLIEGVAFKKTFSYAGFEMQPKTYNHCKIALLNVELELKAEK 119 Query: 745 DNAEVR 762 +NAEVR Sbjct: 120 ENAEVR 125 Score = 66.5 bits (155), Expect = 2e-11 Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 1/73 (1%) Frame = +3 Query: 438 GTKRSPIEVCINSDVIETDSSTEGHF-SKIVVDAVLSLDTPLLPLDMIGIKKVPGGALED 614 G R +E C + + +T+ F +K+VVDAV+ LD LLPLDMIG+KKV GGALED Sbjct: 18 GEMRQLLERCAATALSSKLIATQKEFFAKMVVDAVMMLDE-LLPLDMIGMKKVSGGALED 76 Query: 615 SFLVPGVGFQENF 653 S L+ GV F++ F Sbjct: 77 SMLIEGVAFKKTF 89 >SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) Length = 505 Score = 69.3 bits (162), Expect = 3e-12 Identities = 28/64 (43%), Positives = 49/64 (76%) Frame = +2 Query: 62 SNINACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIA 241 S+I A + V ++T+LGP+GMDK++V +G+ ++NDGATI+ ++++ H AK +V+++ Sbjct: 34 SHILAARAVASILKTSLGPKGMDKMMVSPDGEVTVTNDGATILGMMEVDHQIAKLMVELS 93 Query: 242 KSQD 253 KSQD Sbjct: 94 KSQD 97 Score = 51.6 bits (118), Expect = 7e-07 Identities = 26/81 (32%), Positives = 49/81 (60%), Gaps = 1/81 (1%) Frame = +1 Query: 256 EVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDN-KS 432 E+GDGTT VV+LAG +L+ + ++ G+HP + A+++A+E + A DN Sbjct: 99 EIGDGTTGVVVLAGALLEHAEQLLDWGIHPIRIADGYELAAKIALEHMDSIA---DNFPV 155 Query: 433 PEEQRDLLLKCASTAMSSKLI 495 ++ ++ L++ A T + SK++ Sbjct: 156 DKDNKESLIQTAMTTLGSKIV 176 >SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) Length = 531 Score = 68.5 bits (160), Expect = 6e-12 Identities = 32/84 (38%), Positives = 55/84 (65%), Gaps = 2/84 (2%) Frame = +2 Query: 8 ILLLREGTDQTQGKPQLVSNINACQIVVDAVRTTLGPRGMDKLIVD--HNGKAVISNDGA 181 + +L +G ++ + + +S+ + D V++TLGP+GMDK++ NG ++NDGA Sbjct: 6 VSILNQGAEEERAETARLSSFVGAIAIGDLVKSTLGPKGMDKILQSFGQNGNIQVTNDGA 65 Query: 182 TIMKLLDIIHPAAKTLVDIAKSQD 253 TI+K + I +PAAK LV+++K QD Sbjct: 66 TILKSIGIDNPAAKILVELSKVQD 89 Score = 62.5 bits (145), Expect = 4e-10 Identities = 34/89 (38%), Positives = 51/89 (57%) Frame = +1 Query: 241 KVSRCEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKI 420 KV EVGDGTTSV +L E+LK + V +HP+ ++ R + + A EK E A Sbjct: 86 KVQDDEVGDGTTSVTVLTSELLKEAEKLVSCKIHPQTIVAGWRKSVK-AAEKALEAAAVD 144 Query: 421 DNKSPEEQRDLLLKCASTAMSSKLIHQQK 507 + PE+ R+ L+ A T +SSK++ Q + Sbjct: 145 HSSDPEKFREDLMNIARTTLSSKILVQHR 173 Score = 31.5 bits (68), Expect = 0.79 Identities = 20/41 (48%), Positives = 24/41 (58%) Frame = +3 Query: 510 HFSKIVVDAVLSLDTPLLPLDMIGIKKVPGGALEDSFLVPG 632 HF+K+ VDAVL L L+ I I K GG + DSFL G Sbjct: 175 HFAKLAVDAVLRLKGS-GDLNAIQIIKKLGGGMVDSFLDEG 214 >SB_57454| Best HMM Match : DUF924 (HMM E-Value=1) Length = 144 Score = 65.7 bits (153), Expect = 4e-11 Identities = 36/89 (40%), Positives = 52/89 (58%) Frame = +1 Query: 241 KVSRCEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKI 420 KV EVGDGTTSV +LA E+LK + V +HP+ ++ R + + A EK E A Sbjct: 4 KVQDDEVGDGTTSVTVLASELLKEAEKLVSCKIHPQTIVAGWRKSVK-AAEKALEAAAVD 62 Query: 421 DNKSPEEQRDLLLKCASTAMSSKLIHQQK 507 + PE+ RD L+ A T +SSK++ Q + Sbjct: 63 HSSDPEKFRDDLMNIARTTLSSKILVQHR 91 Score = 31.5 bits (68), Expect = 0.79 Identities = 20/41 (48%), Positives = 24/41 (58%) Frame = +3 Query: 510 HFSKIVVDAVLSLDTPLLPLDMIGIKKVPGGALEDSFLVPG 632 HF+K+ VDAVL L L+ I I K GG + DSFL G Sbjct: 93 HFAKLAVDAVLRLKGS-GDLNAIQIIKKLGGGMVDSFLDEG 132 >SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8) Length = 186 Score = 62.1 bits (144), Expect = 5e-10 Identities = 31/56 (55%), Positives = 41/56 (73%), Gaps = 2/56 (3%) Frame = +2 Query: 47 KPQLV--SNINACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDII 208 KPQ + +NI A + V DA+RT+LGP+GMDK+I NG I+NDGATI KL+D + Sbjct: 21 KPQEIRMTNITAAKAVADAIRTSLGPKGMDKMIQGGNGDVTITNDGATI-KLIDTV 75 >SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 762 Score = 58.4 bits (135), Expect = 6e-09 Identities = 31/77 (40%), Positives = 49/77 (63%) Frame = +1 Query: 262 GDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEE 441 GDGTTS V++ GE+LK+ +V EG+HPR++ A + A+E ++E VK+ S E Sbjct: 191 GDGTTSNVMIIGELLKQADLYVSEGLHPRLVTEGFEVAKKKALEVLEE--VKV---SREM 245 Query: 442 QRDLLLKCASTAMSSKL 492 RD L+ A T++ +K+ Sbjct: 246 DRDTLINVAKTSLRTKV 262 >SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 118 Score = 55.2 bits (127), Expect = 6e-08 Identities = 26/51 (50%), Positives = 36/51 (70%) Frame = +1 Query: 256 EVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQ 408 EVGDGTTSV+ILAGE + +PF+E+ +HP +I A R A I+ +K+Q Sbjct: 32 EVGDGTTSVIILAGEFMSVAEPFLEQQMHPTQIIAAYRLAMDDMIDILKQQ 82 Score = 36.3 bits (80), Expect = 0.028 Identities = 12/30 (40%), Positives = 25/30 (83%) Frame = +2 Query: 164 ISNDGATIMKLLDIIHPAAKTLVDIAKSQD 253 ++NDG I++ + + HPAAK++++I+++QD Sbjct: 1 MTNDGNAILREIQVKHPAAKSMIEISRTQD 30 >SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 315 Score = 55.2 bits (127), Expect = 6e-08 Identities = 26/51 (50%), Positives = 36/51 (70%) Frame = +1 Query: 256 EVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQ 408 EVGDGTTSV+ILAGE + +PF+E+ +HP +I A R A I+ +K+Q Sbjct: 229 EVGDGTTSVIILAGEFMSVAEPFLEQQMHPTQIIAAYRLAMDDMIDILKQQ 279 >SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15) Length = 563 Score = 41.1 bits (92), Expect = 0.001 Identities = 17/64 (26%), Positives = 36/64 (56%) Frame = +2 Query: 68 INACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIAKS 247 + CQ ++ + GP G+D ++ +G +I+N G+ I++ L + +P + +V+ A+S Sbjct: 6 LQTCQNFERILKKSFGPNGLDVMLRSSSGNILITNSGSMILESLTMGNPTERMIVEAARS 65 Query: 248 QDAR 259 R Sbjct: 66 LSGR 69 >SB_49248| Best HMM Match : Cpn60_TCP1 (HMM E-Value=1.6) Length = 278 Score = 35.1 bits (77), Expect = 0.064 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = +2 Query: 86 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDI 205 + DAV TLGP+G + +I G I+ DG T+ K +++ Sbjct: 79 LADAVAVTLGPKGKNVIIEQSFGGPKITKDGVTVAKAIEL 118 >SB_29096| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 41 Score = 31.1 bits (67), Expect = 1.0 Identities = 14/38 (36%), Positives = 23/38 (60%) Frame = +1 Query: 295 GEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQ 408 GE + +PF+E+ +HP +I A R A I+ +K+Q Sbjct: 2 GEFMSVAEPFLEQQMHPTQIIAAYRLAMDDMIDILKQQ 39 >SB_6378| Best HMM Match : Keratin_B2 (HMM E-Value=0.1) Length = 269 Score = 30.3 bits (65), Expect = 1.8 Identities = 20/66 (30%), Positives = 29/66 (43%) Frame = +1 Query: 70 QCLSNCCRCGQNHPGSPWYGQADCRSQWKGGYIKRWCNDHEATGYHSPCR*DSCGYCKVS 249 QC + C+ G++ GSP +ADC GG ++ C H + C SC S Sbjct: 145 QCCRSVCKVGRDCVGSPCSSRADC-----GGPFEQSCCGHRCV-FGKSCYGRSCDL--TS 196 Query: 250 RCEVGD 267 C G+ Sbjct: 197 DCSEGE 202 >SB_3214| Best HMM Match : Keratin_B2 (HMM E-Value=0.096) Length = 191 Score = 30.3 bits (65), Expect = 1.8 Identities = 20/66 (30%), Positives = 29/66 (43%) Frame = +1 Query: 70 QCLSNCCRCGQNHPGSPWYGQADCRSQWKGGYIKRWCNDHEATGYHSPCR*DSCGYCKVS 249 QC + C+ G++ GSP +ADC GG ++ C H + C SC S Sbjct: 67 QCCRSVCKVGRDCVGSPCSSRADC-----GGPFEQSCCGHRCV-FGKSCYGRSCDL--TS 118 Query: 250 RCEVGD 267 C G+ Sbjct: 119 DCSEGE 124 >SB_53400| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1130 Score = 29.5 bits (63), Expect = 3.2 Identities = 33/143 (23%), Positives = 48/143 (33%), Gaps = 6/143 (4%) Frame = +1 Query: 61 LQHQCLSNCCRCGQNHPGSPWYGQADCRSQWKGGYIKRWCNDHEATGYHSPCR*DSCGYC 240 +Q C C CG P R+ W + +A C+ SCG C Sbjct: 769 MQFNCRKTCGMCGTRKSLKPAMPVCKDRTSWCRKWASYGYCHTKAVYMLKSCK-RSCGIC 827 Query: 241 KVSRCEVGDGTTSVVILAGEILKRLKPFVEEGV---HPRVLIRAVRTASRLAIEKIKEQA 411 + + + K + GV P + + R A R+ K + Sbjct: 828 EDPSGSKATPVGDPSLPCEDKHKSCVYWASIGVCDVRPTYMYKHCRLACRVCTPVKKHEG 887 Query: 412 VKIDNKSPEEQRD---LLLKCAS 471 DNK P+E+ D L KCAS Sbjct: 888 PPCDNKDPDEECDHWAKLGKCAS 910 >SB_48461| Best HMM Match : zf-CCHC (HMM E-Value=0.0016) Length = 327 Score = 29.1 bits (62), Expect = 4.2 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Frame = +1 Query: 85 CCRCGQNHPGSPW-YGQADCRSQWKGGYIKRWC 180 C RCG+NHP S + +A C K G+I C Sbjct: 92 CYRCGKNHPPSKCRFKEATCHYCKKKGHIVAKC 124 >SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14) Length = 635 Score = 28.7 bits (61), Expect = 5.5 Identities = 23/80 (28%), Positives = 30/80 (37%), Gaps = 2/80 (2%) Frame = +1 Query: 22 GGNGPDAGQAPA--RLQHQCLSNCCRCGQNHPGSPWYGQADCRSQWKGGYIKRWCNDHEA 195 G +GP QA R C +N C C N G +C S W+G + C Sbjct: 120 GYDGPSCDQACTLGRWDVNC-NNTCECQNNSTCDSVQGICNCTSGWQGDACQLPCK---- 174 Query: 196 TGYHSPCR*DSCGYCKVSRC 255 +GY+ C SRC Sbjct: 175 SGYYGNSCKQVCQCQNRSRC 194 >SB_41690| Best HMM Match : DSL (HMM E-Value=0) Length = 2798 Score = 28.3 bits (60), Expect = 7.3 Identities = 10/30 (33%), Positives = 12/30 (40%) Frame = +1 Query: 127 GQADCRSQWKGGYIKRWCNDHEATGYHSPC 216 G DC W GG +C H + H C Sbjct: 1128 GSKDCHDGWYGGTCSIYCLPHNGSSGHYDC 1157 >SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23) Length = 300 Score = 28.3 bits (60), Expect = 7.3 Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 1/52 (1%) Frame = +1 Query: 88 CRCGQNHPGSPWYGQADCRSQWKGGYIKRWC-NDHEATGYHSPCR*DSCGYC 240 C C N SP+ GQ +C S + G ++ C D C G C Sbjct: 146 CDCKNNATCSPFTGQCNCTSGFTGDRCEKQCAGDSGGVDCRQHCNCTEWGTC 197 >SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35) Length = 1671 Score = 27.9 bits (59), Expect = 9.7 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%) Frame = +1 Query: 76 LSNCCRCGQN-HPGSPWYGQADCRSQWKGGYIKRWC 180 + C RCG+N HP + +A C K G+I C Sbjct: 381 IKECYRCGKNHHPSKCRFKEATCHYCKKKGHIVAKC 416 >SB_5496| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1352 Score = 27.9 bits (59), Expect = 9.7 Identities = 10/24 (41%), Positives = 12/24 (50%) Frame = +3 Query: 225 LLWILQSLKMRGWRWNHLGSDIGR 296 L W S+K WRWNH+ R Sbjct: 385 LRWANDSMKTYEWRWNHVNPKTNR 408 >SB_57323| Best HMM Match : ShTK (HMM E-Value=0) Length = 911 Score = 27.9 bits (59), Expect = 9.7 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%) Frame = +1 Query: 148 QWKGGYIKRWCNDHEATGY-HSPCR*DSCGYC 240 +WKG WCND + Y CR +CGYC Sbjct: 817 KWKG---YGWCNDGDHDKYMEEVCR-KTCGYC 844 >SB_18362| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 213 Score = 27.9 bits (59), Expect = 9.7 Identities = 18/52 (34%), Positives = 23/52 (44%) Frame = +1 Query: 607 LKTRSWYLVWAFKKTFSYAGFEMQPKTYKDCKIALLNIELELKAERDNAEVR 762 LK R+ + K FSYAG Q + KDC L ++ NAE R Sbjct: 90 LKQRTNFYNAMIKPLFSYAGTVWQTASTKDCLTRFLTLQKRAARLILNAEPR 141 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 24,780,294 Number of Sequences: 59808 Number of extensions: 547660 Number of successful extensions: 1784 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 1587 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1778 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2119930593 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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