Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20750
         (777 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            28   0.37 
AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    25   2.6  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   4.6  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   8.0  

>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 27.9 bits (59), Expect = 0.37
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1

Query: 13   FTEGGNGPDAGQAPARLQHQCLSNCCRCGQNHPGS 117
            F   GNG   G A A+L HQ LSN  R   +  G+
Sbjct: 1106 FVISGNGGGVGGAGAQLLHQQLSNAYRASGHINGA 1140


>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 14/57 (24%), Positives = 28/57 (49%)
 Frame = -3

Query: 604 APPGTFLIPIMSRGRSGVSKDRTASTTILEKWPSVDESVSMTSLLMHTSIGDLFVPQ 434
           +PP  F IP     +S    +R +     E      ESV++++L ++ ++  + VP+
Sbjct: 69  SPPSGFSIPTPLNSQSRGGSERISEKKCNEYKDLTTESVAISALTLNPTLVKIDVPK 125


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 28   NGPDAGQAPARLQHQCLSNCCR 93
            +GPD  +    L  QCL   CR
Sbjct: 1038 SGPDRTEPDTLLDEQCLEELCR 1059


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +2

Query: 557  TSASRHDWNQKGSRWS-S*RLVPGTWCGLSRKLSVTLALRCSRRHTK 694
            TSA + DWN++ +R + S  L P    G S +  V +A R  RR+ +
Sbjct: 1028 TSALQRDWNEERARLAVSSTLSPSHPVGPSDRNQV-IAARRERRNAR 1073


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 834,278
Number of Sequences: 2352
Number of extensions: 17079
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)