Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20749
         (320 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   1.4  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   4.2  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    20   5.5  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    20   7.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    19   9.7  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 309 P*CKLSSILLIIRMTMLLV 253
           P CKL ++L++  + +LLV
Sbjct: 5   PRCKLRTVLIVTLLVVLLV 23


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 250 EFLTRLNKRKVIYLSVT 200
           EFLT  +KRK+   S T
Sbjct: 349 EFLTNTHKRKIENTSTT 365


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1

Query: 218 NLSFGYKH 195
           N SFGYKH
Sbjct: 141 NRSFGYKH 148


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 194 NFVVSQCQHSH*YDF 150
           NF+  +CQ  H Y +
Sbjct: 112 NFLPERCQQRHYYSY 126


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 19.4 bits (38), Expect = 9.7
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -1

Query: 212 SFGYKHNFVVSQCQHSH*YDFIIFS 138
           ++ + + F++  C +   Y FIIF+
Sbjct: 100 TYYFYYAFIILLCVYYFYYAFIIFT 124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,762
Number of Sequences: 336
Number of extensions: 1147
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6048897
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)