Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20747
(785 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 36 0.001
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 29 0.22
AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 26 1.5
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 25 3.5
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol... 25 3.5
DQ974172-1|ABJ52812.1| 409|Anopheles gambiae serpin 13 protein. 24 4.6
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 24 6.1
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 23 8.1
AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein p... 23 8.1
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 35.9 bits (79), Expect = 0.001
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 3/94 (3%)
Frame = +1
Query: 472 ADPGQRMRS---GIVGSNQCNSCRCNADGYGICSDEACTEHIIEPKKECAPKTMWKNECN 642
+DP R R+ G+ +C C C+ +G + + E ++EP A + N
Sbjct: 501 SDPEYRERADECSNAGTYKCGICECDGTYHGQRCECSAMESLLEPGMVDACRM--SNASE 558
Query: 643 TCWCTSDGKPMCTRMECITNNTPEKSELIQGREC 744
C G+ C C+ P ELI GR C
Sbjct: 559 EC----SGRGQCVCGVCVCERRPNPDELIDGRYC 588
Score = 24.6 bits (51), Expect = 3.5
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 401 CLDNGLGLCSLDACRRSSTPKKFELIQGREC 493
C G +C + C R P ELI GR C
Sbjct: 560 CSGRGQCVCGVCVCERRPNPD--ELIDGRYC 588
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 28.7 bits (61), Expect = 0.22
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 9/90 (10%)
Frame = +1
Query: 502 IVGSNQCNSCRCNADG-YGICSDEACTEHIIEP----KK--ECAPKTMWKNE--CNTCWC 654
IV N C SC C+ G Y D + +P KK +CAP +E C+ C C
Sbjct: 930 IVSGNGCESCNCDPIGSYNASCDTYSGDCFCKPGVVGKKCDKCAPAYYGFSEDGCHACDC 989
Query: 655 TSDGKPMCTRMECITNNTPEKSELIQGREC 744
G +C ++ ++GR C
Sbjct: 990 DPSGS---KGSQCNQYGQCPCNDNVEGRRC 1016
Score = 23.4 bits (48), Expect = 8.1
Identities = 12/36 (33%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +2
Query: 257 ESNCHFCRCSDSGV--AECLRQDSCDQIIFTEPVRC 358
E CH C C SG ++C + C E RC
Sbjct: 981 EDGCHACDCDPSGSKGSQCNQYGQCPCNDNVEGRRC 1016
>AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking
protein.
Length = 932
Score = 25.8 bits (54), Expect = 1.5
Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +1
Query: 646 CWCTSDGKPMCTRMECI-TNNTPEK 717
CW ++D + C+ EC+ T TP +
Sbjct: 116 CWGSNDDQESCSSNECVSTTETPTR 140
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 24.6 bits (51), Expect = 3.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 136 VPGLHFRAPLSQCRAKTIKQIAIKHLISL 50
V +HFR+P + A ++ I I HL L
Sbjct: 323 VLNIHFRSPQTHTMAPWVRTIFINHLPKL 351
>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
5-oxoprolinase protein.
Length = 1344
Score = 24.6 bits (51), Expect = 3.5
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 282 HLQKWQLLSPRFPPGIPLPTAFLGRQTRH 196
HL +++P F PG LP F+ + H
Sbjct: 857 HLPDLTVITPVFAPGEALPVFFVASRGHH 885
>DQ974172-1|ABJ52812.1| 409|Anopheles gambiae serpin 13 protein.
Length = 409
Score = 24.2 bits (50), Expect = 4.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -2
Query: 286 RAPAEVAVALPSVPARHSTSDCISWTADASSVVI 185
++PA +VALPSV R S S DA+ + +
Sbjct: 175 QSPASSSVALPSVSFRSGFSTGFSKALDATILAL 208
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 23.8 bits (49), Expect = 6.1
Identities = 18/55 (32%), Positives = 20/55 (36%)
Frame = -1
Query: 581 SVQASSLQMPYPSALHLQLLHWFDPTIPERILCPGSAQTSWELTIFYRHPRSIGP 417
S + SS QM P L PT CP ELT FY H + P
Sbjct: 264 SQRPSSSQMQRPKVQQLDTAA--APTNHHLYRCPACGNLFVELTNFYNHSCTKAP 316
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 23.4 bits (48), Expect = 8.1
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 392 CYNPSGRRCLADNAQVQ 342
CY+PS R+C + Q +
Sbjct: 1447 CYSPSDRQCAEEREQAE 1463
>AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein
protein.
Length = 499
Score = 23.4 bits (48), Expect = 8.1
Identities = 24/80 (30%), Positives = 37/80 (46%)
Frame = +2
Query: 530 VGAMPMDTAFVVTKPALNTLSSQRKNVRRRRCGKMNATRVGALRMVNPCALGWNASLITL 709
V A + A +V + L+T + R NV KM+ + + AL + L+T+
Sbjct: 108 VSASKLQEALMVARE-LHTYTKDRNNVHAP-IKKMSVSILSALSCIE-------RELLTM 158
Query: 710 PRSLS*SRAENALRDQRGEP 769
L RAE ALR+ + EP
Sbjct: 159 --KLRAERAEKALREVQSEP 176
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 958,086
Number of Sequences: 2352
Number of extensions: 23127
Number of successful extensions: 122
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 121
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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