Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20746
         (778 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    24   1.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.7  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   4.8  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   6.3  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   6.3  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.3  

>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -3

Query: 740 AGFLGSTATRTTGDTLNFITFMLWAFLKVVMVPVLTK 630
           +GF     T    D  N++TF    F+ V++  +L K
Sbjct: 32  SGFENFVKTYLVSDFENYVTFFCSLFIVVILKLILAK 68


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 3/22 (13%)
 Frame = -3

Query: 332 HHGVPRI---TSPYDISGPLQV 276
           HH  PR    T+P+DI+ PL V
Sbjct: 742 HHQPPRNPVGTNPHDINNPLSV 763


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 3/22 (13%)
 Frame = -3

Query: 332 HHGVPRI---TSPYDISGPLQV 276
           HH  PR    T+P+DI+ PL V
Sbjct: 634 HHQPPRNPVGTNPHDINNPLSV 655


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 703 PVVRVAVEPKNPADLPKLVEVLK 771
           PV+R+ V   NP D   L+ +++
Sbjct: 480 PVMRICVSAWNPKDCDPLITLIE 502


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 385 VREQDGADLRQGSFLRLWTRF 447
           +++Q G    +G F++LW  F
Sbjct: 382 MQDQKGWGRSEGDFIKLWDMF 402


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 303 WRCYTRDPMMMKLPLVSRAVILK 371
           ++ Y +DP+ +   LVS  ++LK
Sbjct: 71  FKAYIKDPLTLAQGLVSTEMLLK 93


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = +1

Query: 481 HHG-TKLYTWKKEDLYEKTIQRTILMMGRYVEAIEDVPSGN 600
           H G TK+Y   K + Y   + RTI    R  +  +   S N
Sbjct: 142 HFGATKVYNSMKREYYWPNMYRTIKKRLRSCDLCQKTKSSN 182


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,056
Number of Sequences: 336
Number of extensions: 4740
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)