Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20746
(778 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 165 2e-41
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 165 2e-41
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 67 2e-11
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 67 2e-11
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 32 0.40
Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z66521-11|CAA91398.2| 471|Caenorhabditis elegans Hypothetical p... 30 1.6
AB031233-1|BAA92262.1| 605|Caenorhabditis elegans kinesin like ... 30 1.6
Z81534-4|CAB04345.1| 277|Caenorhabditis elegans Hypothetical pr... 29 4.9
U00041-2|AAA50670.1| 128|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z29094-6|CAD45581.1| 457|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z29094-5|CAA82336.1| 465|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81530-1|CAB04312.1| 290|Caenorhabditis elegans Hypothetical pr... 28 8.6
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 165 bits (402), Expect = 2e-41
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +2
Query: 254 VIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYA 433
+IA HLPSPV AQKYRMEMLYEGPHDDEAA+ IK+CDP PLMMY+SKMVPTSDKGRFYA
Sbjct: 347 MIAFHLPSPVTAQKYRMEMLYEGPHDDEAAVAIKTCDPNGPLMMYISKMVPTSDKGRFYA 406
Query: 434 FGRVFSGKVVTGQKARIMGPNFTPGRK 514
FGRVFSGKV TG KARI GPN+ PG+K
Sbjct: 407 FGRVFSGKVATGMKARIQGPNYVPGKK 433
Score = 165 bits (400), Expect = 4e-41
Identities = 80/102 (78%), Positives = 88/102 (86%)
Frame = +1
Query: 472 KSSHHGTKLYTWKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTI 651
K+ G KKEDLYEKTIQRTILMMGR++E IED+PSGNI GLVGVDQ+LVK GTI
Sbjct: 420 KARIQGPNYVPGKKEDLYEKTIQRTILMMGRFIEPIEDIPSGNIAGLVGVDQYLVKGGTI 479
Query: 652 TTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEVLKRL 777
TT+K+AHNM+VMKFSVSPVVRVAVE KNPADLPKLVE LKRL
Sbjct: 480 TTYKDAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRL 521
Score = 106 bits (255), Expect = 2e-23
Identities = 43/88 (48%), Positives = 66/88 (75%)
Frame = +3
Query: 3 FFNPQTKKWSKQKDDDNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKKIGVTIKHEDS 182
FF+ +TKKWS + D++KR FC +VLDPI+ VFDA+M KK++ L++K+G+ + +++
Sbjct: 263 FFDLKTKKWSSTQTDESKRGFCQFVLDPIFMVFDAVMNIKKDKTAALVEKLGIKLANDEK 322
Query: 183 DKDGKALLKVVMRSWLPAGEALLQ*LPF 266
D +GK L+KV MR WLPAG+ +LQ + F
Sbjct: 323 DLEGKPLMKVFMRKWLPAGDTMLQMIAF 350
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 165 bits (402), Expect = 2e-41
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +2
Query: 254 VIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYA 433
+IA HLPSPV AQKYRMEMLYEGPHDDEAA+ IK+CDP PLMMY+SKMVPTSDKGRFYA
Sbjct: 347 MIAFHLPSPVTAQKYRMEMLYEGPHDDEAAVAIKTCDPNGPLMMYISKMVPTSDKGRFYA 406
Query: 434 FGRVFSGKVVTGQKARIMGPNFTPGRK 514
FGRVFSGKV TG KARI GPN+ PG+K
Sbjct: 407 FGRVFSGKVATGMKARIQGPNYVPGKK 433
Score = 165 bits (400), Expect = 4e-41
Identities = 80/102 (78%), Positives = 88/102 (86%)
Frame = +1
Query: 472 KSSHHGTKLYTWKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTI 651
K+ G KKEDLYEKTIQRTILMMGR++E IED+PSGNI GLVGVDQ+LVK GTI
Sbjct: 420 KARIQGPNYVPGKKEDLYEKTIQRTILMMGRFIEPIEDIPSGNIAGLVGVDQYLVKGGTI 479
Query: 652 TTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEVLKRL 777
TT+K+AHNM+VMKFSVSPVVRVAVE KNPADLPKLVE LKRL
Sbjct: 480 TTYKDAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRL 521
Score = 106 bits (255), Expect = 2e-23
Identities = 43/88 (48%), Positives = 66/88 (75%)
Frame = +3
Query: 3 FFNPQTKKWSKQKDDDNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKKIGVTIKHEDS 182
FF+ +TKKWS + D++KR FC +VLDPI+ VFDA+M KK++ L++K+G+ + +++
Sbjct: 263 FFDLKTKKWSSTQTDESKRGFCQFVLDPIFMVFDAVMNIKKDKTAALVEKLGIKLANDEK 322
Query: 183 DKDGKALLKVVMRSWLPAGEALLQ*LPF 266
D +GK L+KV MR WLPAG+ +LQ + F
Sbjct: 323 DLEGKPLMKVFMRKWLPAGDTMLQMIAF 350
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 66.9 bits (156), Expect = 2e-11
Identities = 29/92 (31%), Positives = 51/92 (55%)
Frame = +2
Query: 254 VIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYA 433
++ ++ SP+ K ++E Y GP D + A ++ C+ E PLM++ +K P D +F+
Sbjct: 437 LVVQNIKSPLENAKTKIEQTYLGPADSQLAQEMQKCNAEGPLMVHTTKNYPVDDATQFHV 496
Query: 434 FGRVFSGKVVTGQKARIMGPNFTPGRKRTCMR 529
FGRV SG + R++G N++ + C R
Sbjct: 497 FGRVMSGTLEANTDVRVLGENYSIQDEEDCRR 528
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/92 (31%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Frame = +1
Query: 511 KEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTF---KNAHNMK 681
+ED T+ R + + Y + VP+G + G+DQ +VKT TI ++ + +
Sbjct: 523 EEDCRRMTVGRLFVRVASYQIEVSRVPAGCWVLIEGIDQPIVKTATIAELGYEEDVYIFR 582
Query: 682 VMKFSVSPVVRVAVEPKNPADLPKLVEVLKRL 777
+KF+ V++AVEP NP++LPK+++ L+++
Sbjct: 583 PLKFNTRSCVKLAVEPINPSELPKMLDGLRKV 614
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/74 (21%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +3
Query: 3 FFNPQTKKWSKQKDD-DNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKKIGVTIKHED 179
+F +T+K+ K+ D R+F ++L+P+YK+F ++ + D++ ++G+ + E+
Sbjct: 352 YFEKKTRKFVKKSPSHDAPRTFVQFILEPMYKIFSQVVGDVDTCLPDVMAELGIRLSKEE 411
Query: 180 SDKDGKALLKVVMR 221
+ + L+ ++ +
Sbjct: 412 QKMNVRPLIALICK 425
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 66.9 bits (156), Expect = 2e-11
Identities = 29/92 (31%), Positives = 51/92 (55%)
Frame = +2
Query: 254 VIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYA 433
++ ++ SP+ K ++E Y GP D + A ++ C+ E PLM++ +K P D +F+
Sbjct: 312 LVVQNIKSPLENAKTKIEQTYLGPADSQLAQEMQKCNAEGPLMVHTTKNYPVDDATQFHV 371
Query: 434 FGRVFSGKVVTGQKARIMGPNFTPGRKRTCMR 529
FGRV SG + R++G N++ + C R
Sbjct: 372 FGRVMSGTLEANTDVRVLGENYSIQDEEDCRR 403
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/92 (31%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Frame = +1
Query: 511 KEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTF---KNAHNMK 681
+ED T+ R + + Y + VP+G + G+DQ +VKT TI ++ + +
Sbjct: 398 EEDCRRMTVGRLFVRVASYQIEVSRVPAGCWVLIEGIDQPIVKTATIAELGYEEDVYIFR 457
Query: 682 VMKFSVSPVVRVAVEPKNPADLPKLVEVLKRL 777
+KF+ V++AVEP NP++LPK+++ L+++
Sbjct: 458 PLKFNTRSCVKLAVEPINPSELPKMLDGLRKV 489
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/74 (21%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +3
Query: 3 FFNPQTKKWSKQKDD-DNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKKIGVTIKHED 179
+F +T+K+ K+ D R+F ++L+P+YK+F ++ + D++ ++G+ + E+
Sbjct: 227 YFEKKTRKFVKKSPSHDAPRTFVQFILEPMYKIFSQVVGDVDTCLPDVMAELGIRLSKEE 286
Query: 180 SDKDGKALLKVVMR 221
+ + L+ ++ +
Sbjct: 287 QKMNVRPLIALICK 300
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 32.3 bits (70), Expect = 0.40
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +1
Query: 535 IQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKN-AHNMKVMKFSVSPVV 711
+QR + M +E I +G+IC G+D T +T +N A + + M PV+
Sbjct: 392 VQRLVRMHAADMEEITTAYAGDICATFGLD--CHSGETFSTDQNLAPHCESMHIP-EPVI 448
Query: 712 RVAVEPKNPADLPKLVEVLKR 774
+A++P N D ++ L R
Sbjct: 449 SMAIKPVNRKDADNFIKALTR 469
>Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical
protein C11E4.6 protein.
Length = 1170
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 269 NEWQSLKQSFTSRQPRAHHNLQQSFAIFVR 180
NEWQ + + ++R P + N+ + AIFVR
Sbjct: 471 NEWQKSQLTISNRPPAPYDNVPNNSAIFVR 500
>Z66521-11|CAA91398.2| 471|Caenorhabditis elegans Hypothetical
protein W02B12.7 protein.
Length = 471
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/63 (23%), Positives = 34/63 (53%)
Frame = +3
Query: 102 DAIMKFKKEEIDDLLKKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQ*LPFIYHHL 281
DAI++ +E+ DL +I V I+ D ++DG + ++ ++ + + Q + + H+
Sbjct: 129 DAIIRELNDEVVDLRGQIRVAIRVRDFERDGSSNFSIISQNEVQLQQTTGQSNTYSFEHV 188
Query: 282 *WP 290
+P
Sbjct: 189 FFP 191
>AB031233-1|BAA92262.1| 605|Caenorhabditis elegans kinesin like
protein protein.
Length = 605
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/63 (23%), Positives = 34/63 (53%)
Frame = +3
Query: 102 DAIMKFKKEEIDDLLKKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQ*LPFIYHHL 281
DAI++ +E+ DL +I V I+ D ++DG + ++ ++ + + Q + + H+
Sbjct: 263 DAIIRELNDEVVDLRGQIRVAIRVRDFERDGSSNFSIISQNEVQLQQTTGQSNTYSFEHV 322
Query: 282 *WP 290
+P
Sbjct: 323 FFP 325
>Z81534-4|CAB04345.1| 277|Caenorhabditis elegans Hypothetical
protein F37H8.5 protein.
Length = 277
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -3
Query: 245 SFTSRQPRAHHNLQQSFAIFVRILMLDCDSNLLKEIINLLFLKF 114
SF + A HN + + + + L DC + L K++ ++F F
Sbjct: 62 SFCDKHRAATHNQKINITVLIEALCPDCQNFLTKQLYPIVFKNF 105
>U00041-2|AAA50670.1| 128|Caenorhabditis elegans Hypothetical
protein C03B8.3 protein.
Length = 128
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 96 VFDAIMKFKKEEIDDLLKKIGVTIKHED 179
+FDA+ K ++ +D K + VTI HED
Sbjct: 69 LFDALRKITADQYNDHKKVVEVTIDHED 96
>Z29094-6|CAD45581.1| 457|Caenorhabditis elegans Hypothetical
protein C07A9.7b protein.
Length = 457
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +1
Query: 559 GRYVEAIEDVPSGN-ICGLVGV 621
GR+VEAIED+P G +C G+
Sbjct: 29 GRFVEAIEDIPIGTVVCVETGI 50
>Z29094-5|CAA82336.1| 465|Caenorhabditis elegans Hypothetical
protein C07A9.7a protein.
Length = 465
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +1
Query: 559 GRYVEAIEDVPSGN-ICGLVGV 621
GR+VEAIED+P G +C G+
Sbjct: 29 GRFVEAIEDIPIGTVVCVETGI 50
>Z81530-1|CAB04312.1| 290|Caenorhabditis elegans Hypothetical
protein F36D1.1 protein.
Length = 290
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +2
Query: 350 IKSCDPEAPLMMYVSKMVPTSD---KGRFYAFGRVFSGKVVTGQKARIMGPNFTPGRKRT 520
I +C E P M S V +S +G Y+ R +G +G + + + PGRK++
Sbjct: 170 IATCSNE-PKMTSSSTFVTSSTSLKRGVHYSPTRSPNGSS-SGLEEELEDEDEQPGRKKS 227
Query: 521 CMRRLSSVQSL 553
C R++S++Q +
Sbjct: 228 CRRQVSNIQPM 238
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,204,748
Number of Sequences: 27780
Number of extensions: 428866
Number of successful extensions: 1452
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1450
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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