Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20745
         (717 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    37   5e-04
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    34   0.005
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   7.2  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   9.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   9.5  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   9.5  

>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 37.1 bits (82), Expect = 5e-04
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +3

Query: 507 FVLTERACTVFMRQICEGIEFVHRQNILHLDLKPENILCLTKTGNR-IKIIDFGLA 671
           FV +E     ++RQI E + + H  +I+H D++P   L  T   +  +K+  FG A
Sbjct: 90  FVYSEAVACHYLRQILEALRYCHENDIIHRDVRPACALLATADNSAPVKLGGFGSA 145


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 33.9 bits (74), Expect = 0.005
 Identities = 16/46 (34%), Positives = 27/46 (58%)
 Frame = +3

Query: 546  QICEGIEFVHRQNILHLDLKPENILCLTKTGNRIKIIDFGLARFYD 683
            QI  G+ ++  + ++H DL   N+  L +T + +KI  FGLA+  D
Sbjct: 942  QIARGMAYLEERRLVHRDLAARNV--LVQTPSCVKITVFGLAKLLD 985


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = -3

Query: 247  EHLIVLVHIRVSFDRDISTRERGLDLSHGICFIYVDHF**SSMNEFTLHSRASDIILIF 71
            E L  L  + + ++R  S      D  HG+  + +DH      N + L  + +DI L F
Sbjct: 861  EGLDSLKELFLQYNRIASIANHTFDHLHGLKILRLDHNRLVEFNVWLLPKQLNDIRLAF 919


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 603 LDPGGVYSGGERTR 562
           +DPGG  SGG R +
Sbjct: 655 VDPGGTLSGGARAK 668


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = -1

Query: 438 PPVVSVVQLDQSRVPESSHHVHLPFHVASLVPP 340
           PP         S V   SHH+H   H A+  PP
Sbjct: 799 PPHPHSALSSHSPVGAGSHHLHHLHHHAAQQPP 831


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = -1

Query: 597  PGGVYSGGERTRCPRRSVA*TQYRRALSERIFVDDSFEQLASR 469
            P G ++  E  +C  +     QY R+LS   F+D+  +  A +
Sbjct: 1808 PEGEWAKDEFDKC--KDAIDAQYERSLSSGFFIDNCLQYEARK 1848


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 743,672
Number of Sequences: 2352
Number of extensions: 14284
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)