Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20744
(719 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 149 1e-37
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 149 1e-37
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 149 1e-37
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 149 1e-37
X87410-1|CAA60857.1| 498|Anopheles gambiae maltase-like protein... 28 0.25
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 27 0.77
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 26 1.0
AF020851-1|AAC31864.1| 214|Anopheles gambiae unknown protein. 24 5.4
AF020850-1|AAC31863.1| 214|Anopheles gambiae unknown protein. 24 5.4
AF020849-1|AAC31862.1| 214|Anopheles gambiae unknown protein. 24 5.4
AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14... 23 7.2
AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein. 23 9.5
AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein. 23 9.5
AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P... 23 9.5
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 149 bits (360), Expect = 1e-37
Identities = 68/70 (97%), Positives = 70/70 (100%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 685
GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEAL
Sbjct: 44 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEAL 103
Query: 686 YDICFRTLKL 715
YDICFRTLK+
Sbjct: 104 YDICFRTLKV 113
Score = 70.5 bits (165), Expect = 5e-14
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +3
Query: 378 HYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 476
HYTEGAELVD+VLDVVRKE E+CDCLQGFQLTH
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTH 33
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 149 bits (360), Expect = 1e-37
Identities = 68/70 (97%), Positives = 70/70 (100%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 685
GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEAL
Sbjct: 44 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEAL 103
Query: 686 YDICFRTLKL 715
YDICFRTLK+
Sbjct: 104 YDICFRTLKV 113
Score = 70.5 bits (165), Expect = 5e-14
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +3
Query: 378 HYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 476
HYTEGAELVD+VLDVVRKE E+CDCLQGFQLTH
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTH 33
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 149 bits (360), Expect = 1e-37
Identities = 68/70 (97%), Positives = 70/70 (100%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 685
GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEAL
Sbjct: 44 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEAL 103
Query: 686 YDICFRTLKL 715
YDICFRTLK+
Sbjct: 104 YDICFRTLKV 113
Score = 70.5 bits (165), Expect = 5e-14
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +3
Query: 378 HYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 476
HYTEGAELVD+VLDVVRKE E+CDCLQGFQLTH
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTH 33
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 149 bits (360), Expect = 1e-37
Identities = 68/70 (97%), Positives = 70/70 (100%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 685
GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEAL
Sbjct: 44 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEAL 103
Query: 686 YDICFRTLKL 715
YDICFRTLK+
Sbjct: 104 YDICFRTLKV 113
Score = 70.5 bits (165), Expect = 5e-14
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +3
Query: 378 HYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 476
HYTEGAELVD+VLDVVRKE E+CDCLQGFQLTH
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTH 33
>X87410-1|CAA60857.1| 498|Anopheles gambiae maltase-like protein
Agm1 protein.
Length = 498
Score = 28.3 bits (60), Expect = 0.25
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 569 VVPSPKVSDTVVEPYNATLSVHQLVENTDETY 664
V P + S +P N T VHQ +N DET+
Sbjct: 236 VYPDEEKSGETDDPDNPTYLVHQHTQNLDETF 267
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 26.6 bits (56), Expect = 0.77
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWE 132
MRE + + GQ G QIG W+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 26.2 bits (55), Expect = 1.0
Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +1
Query: 226 ASGGKYV-PRASSSTWSPAPWTL 291
A GG YV A++++W+PA W L
Sbjct: 2698 AVGGAYVGASAANNSWNPAKWEL 2720
>AF020851-1|AAC31864.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 23.8 bits (49), Expect = 5.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 206 SMYTTMKPPAASTCPAHPRRLGARHH 283
S+YTT+ P+AST H +RHH
Sbjct: 13 SLYTTVSEPSASTKHRH----HSRHH 34
>AF020850-1|AAC31863.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 23.8 bits (49), Expect = 5.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 206 SMYTTMKPPAASTCPAHPRRLGARHH 283
S+YTT+ P+AST H +RHH
Sbjct: 13 SLYTTVSEPSASTKHRH----HSRHH 34
>AF020849-1|AAC31862.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 23.8 bits (49), Expect = 5.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 206 SMYTTMKPPAASTCPAHPRRLGARHH 283
S+YTT+ P+AST H +RHH
Sbjct: 13 SLYTTVSEPSASTKHRH----HSRHH 34
>AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14D2
protein.
Length = 372
Score = 23.4 bits (48), Expect = 7.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 339 FGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
FG G + G YT +E +D VLD +
Sbjct: 343 FGLEQCGTDGVPGVYTRMSEYMDWVLDTM 371
>AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein.
Length = 259
Score = 23.0 bits (47), Expect = 9.5
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -2
Query: 415 KTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKG 302
K T + + CPL ++ DC +L KI KG
Sbjct: 195 KATGTKAHTAKYCPLKPVITPEDCLAMELRRHKIHRKG 232
>AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein.
Length = 260
Score = 23.0 bits (47), Expect = 9.5
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -2
Query: 415 KTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKG 302
K T + + CPL ++ DC +L KI KG
Sbjct: 196 KATGTKAHTAKYCPLKPVITPEDCLAMELRRHKIHRKG 233
>AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P450
reductase protein.
Length = 679
Score = 23.0 bits (47), Expect = 9.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 121 KFWEIISDEHGIDPTG 168
KFW + D GI+ TG
Sbjct: 225 KFWPTVCDYFGIESTG 240
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,337
Number of Sequences: 2352
Number of extensions: 14895
Number of successful extensions: 67
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -