Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20744
(719 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 156 2e-38
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 156 2e-38
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 156 2e-38
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 155 2e-38
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 154 5e-38
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 154 6e-38
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 153 1e-37
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 153 1e-37
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 152 3e-37
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 83 1e-16
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 83 1e-16
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 83 2e-16
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 83 2e-16
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 83 2e-16
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 83 2e-16
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 81 1e-15
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 63 2e-10
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 62 3e-10
At5g20860.1 68418.m02477 pectinesterase family protein contains ... 32 0.44
At4g37190.1 68417.m05265 expressed protein 31 1.0
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 31 1.0
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 30 1.3
At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein si... 29 2.3
At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein ... 29 4.1
At1g32200.2 68414.m03961 glycerol-3-phosphate acyltransferase, c... 28 5.4
At1g32200.1 68414.m03960 glycerol-3-phosphate acyltransferase, c... 28 5.4
At4g36610.1 68417.m05196 hydrolase, alpha/beta fold family prote... 28 7.2
At2g38800.1 68415.m04764 calmodulin-binding protein-related cont... 28 7.2
At4g01430.2 68417.m00184 nodulin MtN21 family protein similar to... 27 9.5
At4g01430.1 68417.m00183 nodulin MtN21 family protein similar to... 27 9.5
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 9.5
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 156 bits (378), Expect = 2e-38
Identities = 69/77 (89%), Positives = 75/77 (97%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR +L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAE+CDCLQGFQ+ H
Sbjct: 121 RKEAENCDCLQGFQVCH 137
Score = 130 bits (313), Expect = 1e-30
Identities = 61/71 (85%), Positives = 65/71 (91%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 685
GTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEAL
Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
Query: 686 YDICFRTLKLS 718
YDICFRTLKL+
Sbjct: 208 YDICFRTLKLT 218
Score = 114 bits (275), Expect = 5e-26
Identities = 48/63 (76%), Positives = 56/63 (88%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 156 bits (378), Expect = 2e-38
Identities = 69/77 (89%), Positives = 75/77 (97%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR +L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAE+CDCLQGFQ+ H
Sbjct: 121 RKEAENCDCLQGFQVCH 137
Score = 130 bits (314), Expect = 9e-31
Identities = 61/71 (85%), Positives = 65/71 (91%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 685
GTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEAL
Sbjct: 148 GTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
Query: 686 YDICFRTLKLS 718
YDICFRTLKL+
Sbjct: 208 YDICFRTLKLA 218
Score = 117 bits (282), Expect = 7e-27
Identities = 52/63 (82%), Positives = 56/63 (88%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 156 bits (378), Expect = 2e-38
Identities = 69/77 (89%), Positives = 75/77 (97%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR +L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAE+CDCLQGFQ+ H
Sbjct: 121 RKEAENCDCLQGFQVCH 137
Score = 131 bits (317), Expect = 4e-31
Identities = 62/71 (87%), Positives = 65/71 (91%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 685
GTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEAL
Sbjct: 148 GTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
Query: 686 YDICFRTLKLS 718
YDICFRTLKLS
Sbjct: 208 YDICFRTLKLS 218
Score = 115 bits (276), Expect = 4e-26
Identities = 49/63 (77%), Positives = 57/63 (90%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 155 bits (377), Expect = 2e-38
Identities = 68/77 (88%), Positives = 75/77 (97%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR +L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 62 PRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 121
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAE+CDCLQGFQ+ H
Sbjct: 122 RKEAENCDCLQGFQVCH 138
Score = 131 bits (316), Expect = 5e-31
Identities = 62/71 (87%), Positives = 65/71 (91%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 685
GTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEAL
Sbjct: 149 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 208
Query: 686 YDICFRTLKLS 718
YDICFRTLKLS
Sbjct: 209 YDICFRTLKLS 219
Score = 119 bits (287), Expect = 2e-27
Identities = 53/64 (82%), Positives = 58/64 (90%), Gaps = 1/64 (1%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGD-SDLQLERINVYYNEASGGKY 243
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD +DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 244 VPRA 255
VPRA
Sbjct: 61 VPRA 64
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 154 bits (374), Expect = 5e-38
Identities = 67/77 (87%), Positives = 75/77 (97%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR +L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 62 PRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 121
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAE+CDCLQGFQ+ H
Sbjct: 122 RKEAENCDCLQGFQVCH 138
Score = 131 bits (316), Expect = 5e-31
Identities = 62/71 (87%), Positives = 65/71 (91%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 685
GTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEAL
Sbjct: 149 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 208
Query: 686 YDICFRTLKLS 718
YDICFRTLKLS
Sbjct: 209 YDICFRTLKLS 219
Score = 124 bits (298), Expect = 8e-29
Identities = 53/64 (82%), Positives = 60/64 (93%), Gaps = 1/64 (1%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 243
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 244 VPRA 255
VPRA
Sbjct: 61 VPRA 64
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 154 bits (373), Expect = 6e-38
Identities = 68/77 (88%), Positives = 75/77 (97%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR IL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAE+CDCLQGFQ+ H
Sbjct: 121 RKEAENCDCLQGFQVCH 137
Score = 130 bits (313), Expect = 1e-30
Identities = 61/71 (85%), Positives = 65/71 (91%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 685
GTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEAL
Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
Query: 686 YDICFRTLKLS 718
YDICFRTLKL+
Sbjct: 208 YDICFRTLKLT 218
Score = 121 bits (291), Expect = 6e-28
Identities = 51/63 (80%), Positives = 58/63 (92%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 153 bits (370), Expect = 1e-37
Identities = 67/77 (87%), Positives = 74/77 (96%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR +L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAE+CDCLQGFQ+ H
Sbjct: 121 RKEAENCDCLQGFQVCH 137
Score = 130 bits (313), Expect = 1e-30
Identities = 61/71 (85%), Positives = 65/71 (91%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 685
GTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEAL
Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
Query: 686 YDICFRTLKLS 718
YDICFRTLKL+
Sbjct: 208 YDICFRTLKLT 218
Score = 120 bits (289), Expect = 1e-27
Identities = 52/63 (82%), Positives = 57/63 (90%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 153 bits (370), Expect = 1e-37
Identities = 67/77 (87%), Positives = 74/77 (96%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR +L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAE+CDCLQGFQ+ H
Sbjct: 121 RKEAENCDCLQGFQVCH 137
Score = 130 bits (313), Expect = 1e-30
Identities = 61/71 (85%), Positives = 65/71 (91%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 685
GTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEAL
Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
Query: 686 YDICFRTLKLS 718
YDICFRTLKL+
Sbjct: 208 YDICFRTLKLT 218
Score = 120 bits (289), Expect = 1e-27
Identities = 52/63 (82%), Positives = 57/63 (90%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 152 bits (368), Expect = 3e-37
Identities = 68/77 (88%), Positives = 74/77 (96%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR +L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAE+ DCLQGFQ+ H
Sbjct: 121 RKEAENSDCLQGFQVCH 137
Score = 130 bits (314), Expect = 9e-31
Identities = 61/71 (85%), Positives = 65/71 (91%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 685
GTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEAL
Sbjct: 148 GTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
Query: 686 YDICFRTLKLS 718
YDICFRTLKL+
Sbjct: 208 YDICFRTLKLA 218
Score = 120 bits (288), Expect = 1e-27
Identities = 53/63 (84%), Positives = 57/63 (90%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 83.4 bits (197), Expect = 1e-16
Identities = 38/73 (52%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD V
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV 122
Query: 426 RKEAESCDCLQGF 464
RK A++C LQGF
Sbjct: 123 RKLADNCTGLQGF 135
Score = 75.4 bits (177), Expect = 4e-14
Identities = 32/70 (45%), Positives = 49/70 (70%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 685
G+LL+ ++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAI 209
Query: 686 YDICFRTLKL 715
YDIC R+L +
Sbjct: 210 YDICRRSLDI 219
Score = 58.8 bits (136), Expect = 3e-09
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 240
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 83.4 bits (197), Expect = 1e-16
Identities = 38/73 (52%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD V
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV 122
Query: 426 RKEAESCDCLQGF 464
RK A++C LQGF
Sbjct: 123 RKLADNCTGLQGF 135
Score = 75.4 bits (177), Expect = 4e-14
Identities = 32/70 (45%), Positives = 49/70 (70%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 685
G+LL+ ++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAI 209
Query: 686 YDICFRTLKL 715
YDIC R+L +
Sbjct: 210 YDICRRSLDI 219
Score = 58.8 bits (136), Expect = 3e-09
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 240
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 82.6 bits (195), Expect = 2e-16
Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRI 122
Query: 426 RKEAESCDCLQGF 464
RK A++C LQGF
Sbjct: 123 RKLADNCTGLQGF 135
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/70 (47%), Positives = 51/70 (72%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 685
G+LL+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAI 209
Query: 686 YDICFRTLKL 715
YDIC R+L +
Sbjct: 210 YDICRRSLNI 219
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 82.6 bits (195), Expect = 2e-16
Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRI 122
Query: 426 RKEAESCDCLQGF 464
RK A++C LQGF
Sbjct: 123 RKLADNCTGLQGF 135
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/70 (47%), Positives = 51/70 (72%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 685
G+LL+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAI 209
Query: 686 YDICFRTLKL 715
YDIC R+L +
Sbjct: 210 YDICRRSLNI 219
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 82.6 bits (195), Expect = 2e-16
Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRI 122
Query: 426 RKEAESCDCLQGF 464
RK A++C LQGF
Sbjct: 123 RKLADNCTGLQGF 135
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/70 (47%), Positives = 51/70 (72%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 685
G+LL+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAI 209
Query: 686 YDICFRTLKL 715
YDIC R+L +
Sbjct: 210 YDICRRSLSI 219
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 82.6 bits (195), Expect = 2e-16
Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRI 122
Query: 426 RKEAESCDCLQGF 464
RK A++C LQGF
Sbjct: 123 RKLADNCTGLQGF 135
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/70 (47%), Positives = 51/70 (72%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 685
G+LL+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAI 209
Query: 686 YDICFRTLKL 715
YDIC R+L +
Sbjct: 210 YDICRRSLSI 219
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 80.6 bits (190), Expect = 1e-15
Identities = 35/73 (47%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+ +
Sbjct: 63 PRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERL 122
Query: 426 RKEAESCDCLQGF 464
RK A++C LQGF
Sbjct: 123 RKLADNCTGLQGF 135
Score = 73.7 bits (173), Expect = 1e-13
Identities = 31/70 (44%), Positives = 49/70 (70%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 685
G+LL+ ++ ++ + +++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+
Sbjct: 150 GSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAI 209
Query: 686 YDICFRTLKL 715
YDIC R+L +
Sbjct: 210 YDICRRSLDI 219
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 240
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 62.9 bits (146), Expect = 2e-10
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLD 419
PR +L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D
Sbjct: 62 PRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMD 120
Query: 420 VVRKEAESCDCLQGFQLTH 476
++ +EA+ D L+GF L H
Sbjct: 121 MIDREADGSDSLEGFVLCH 139
Score = 58.4 bits (135), Expect = 4e-09
Identities = 26/62 (41%), Positives = 38/62 (61%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 249
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 250 RA 255
RA
Sbjct: 63 RA 64
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 682
G+ L+ + + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN A
Sbjct: 150 GSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTA 209
Query: 683 LYDICFRTLKLS 718
L I L L+
Sbjct: 210 LNRIAVERLHLT 221
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLD 419
PR +L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D
Sbjct: 62 PRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMD 120
Query: 420 VVRKEAESCDCLQGFQLTH 476
++ +EA+ D L+GF L H
Sbjct: 121 MIDREADGSDSLEGFVLCH 139
Score = 58.4 bits (135), Expect = 4e-09
Identities = 26/62 (41%), Positives = 38/62 (61%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 249
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 250 RA 255
RA
Sbjct: 63 RA 64
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 682
G+ L+ + + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN A
Sbjct: 150 GSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTA 209
Query: 683 LYDICFRTLKLS 718
L I L L+
Sbjct: 210 LGRIAVERLHLT 221
>At5g20860.1 68418.m02477 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 512
Score = 31.9 bits (69), Expect = 0.44
Identities = 18/77 (23%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Frame = +2
Query: 500 RYGTLLISKIREEYPDRI--MNTYSVVPSPKVSDT--VVEPYNATLSVHQLVENTDETYC 667
+Y +L + +RE + ++ S + + +SD+ ++ P ++++ +LV D TY
Sbjct: 43 KYTSLCVQNLREFRHGSLDGLDFVSFLVNKTISDSNLLIPPLSSSMGSSKLVSLEDSTYT 102
Query: 668 IDNEALYDICFRTLKLS 718
+ + ++ D C R +K+S
Sbjct: 103 LPSPSVSDSCERLMKMS 119
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGI 156
MREIV IQ G+ N +G+ FW + G+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGL 30
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +3
Query: 399 LVDSVLDVVRKEAESCDCLQGF 464
+++SV VVRKEAE+C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 30.3 bits (65), Expect = 1.3
Identities = 24/74 (32%), Positives = 33/74 (44%)
Frame = -3
Query: 237 AAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 58
AAGGF + I + + ++ VP G VL+GD DL A L + FP +L
Sbjct: 136 AAGGFGAIRISS-RPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFPDGIL 194
Query: 57 FM*TINYLTLKISP 16
+ TL I P
Sbjct: 195 INGRGSGATLNIEP 208
>At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 399
Score = 29.5 bits (63), Expect = 2.3
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Frame = -3
Query: 270 PSRRGCAGHVLAAGGFI--VVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAAL 97
P R+ H++ + F+ ++ L Q V +GT GV+ + D+LP S D VA L
Sbjct: 6 PLRKSPTSHMVFSSFFLSFLLVFSILSSQTAVAFIGTYGVNYGRIADNLP--SPDAVATL 63
Query: 96 ------TSLDMYDFPHFVL 58
+ +YD H VL
Sbjct: 64 LKSAKIRNTRIYDADHSVL 82
>At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 304
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 474 VSVGIPGGNHTIPLPFERRLKLNRRAQHPPCSVPWPSC 361
VS G+PG HT P ++ ++ +++ P S PW SC
Sbjct: 136 VSSGLPGKQHTSSSPPSFVVEPSKNSKYIPSSSPW-SC 172
>At1g32200.2 68414.m03961 glycerol-3-phosphate acyltransferase,
chloroplast (ATS1) identical to SP|Q43307|PLSB_ARATH
Glycerol-3-phosphate acyltransferase, chloroplast
precursor (EC 2.3.1.15) (GPAT) (ATS1) {Arabidopsis
thaliana}; contains Pfam profile PF01553:
Acyltransferase
Length = 459
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 229 SGGKYVPRASSSTWSPAPWTLSALD 303
SGG+ P S+ W PAP+ S++D
Sbjct: 322 SGGRDRPNPSTGEWFPAPFDASSVD 346
>At1g32200.1 68414.m03960 glycerol-3-phosphate acyltransferase,
chloroplast (ATS1) identical to SP|Q43307|PLSB_ARATH
Glycerol-3-phosphate acyltransferase, chloroplast
precursor (EC 2.3.1.15) (GPAT) (ATS1) {Arabidopsis
thaliana}; contains Pfam profile PF01553:
Acyltransferase
Length = 459
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 229 SGGKYVPRASSSTWSPAPWTLSALD 303
SGG+ P S+ W PAP+ S++D
Sbjct: 322 SGGRDRPNPSTGEWFPAPFDASSVD 346
>At4g36610.1 68417.m05196 hydrolase, alpha/beta fold family protein
low similarity to
2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase
[Pseudomonas fluorescens] GI:1871461; contains Pfam
profile PF00561: hydrolase, alpha/beta fold family
Length = 317
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 497 FRYGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVE 607
F YG ++ KI E YPD + P ++DT+ E
Sbjct: 134 FSYGGMVAFKIAEAYPDMVRAIVVSGSIPTMTDTINE 170
>At2g38800.1 68415.m04764 calmodulin-binding protein-related
contains similarity to potato calmodulin-binding protein
PCBP GI:17933110 from [Solanum tuberosum]
Length = 612
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -1
Query: 344 SEDEVVRTEDLSERSRADRVHGAGLQVDEDAR 249
SE+E V+ +DL E+ + +G +VD D++
Sbjct: 221 SEEEFVKMDDLEEKKEFENGNGGSCEVDIDSQ 252
>At4g01430.2 68417.m00184 nodulin MtN21 family protein similar to
MtN21 GI:2598575 (root nodule development) from
[Medicago truncatula]
Length = 305
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 176 MGTLTCSWSASMYTTMKPPAASTCPAHPRRLGARHH 283
MGTL C A + T K P S +HP+ ARH+
Sbjct: 78 MGTLICIMGAMLLTFYKGPELSNPHSHPQ---ARHN 110
>At4g01430.1 68417.m00183 nodulin MtN21 family protein similar to
MtN21 GI:2598575 (root nodule development) from
[Medicago truncatula]
Length = 365
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 176 MGTLTCSWSASMYTTMKPPAASTCPAHPRRLGARHH 283
MGTL C A + T K P S +HP+ ARH+
Sbjct: 138 MGTLICIMGAMLLTFYKGPELSNPHSHPQ---ARHN 170
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 73 EIVHIQAGQCGNQIGAKFWEIISD 144
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,004,288
Number of Sequences: 28952
Number of extensions: 306038
Number of successful extensions: 958
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1565336320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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