Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20743
         (728 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032101-1|AAH32101.1|  183|Homo sapiens jagunal homolog 1 (Dros...    45   3e-04
AK074760-1|BAC11188.1|  183|Homo sapiens protein ( Homo sapiens ...    45   3e-04
AK027508-1|BAB55163.1|  183|Homo sapiens protein ( Homo sapiens ...    45   3e-04
AF212230-1|AAK14916.1|  183|Homo sapiens GL009 protein.                31   3.2  
BC044659-1|AAH44659.1| 1008|Homo sapiens helicase-like transcrip...    30   9.8  

>BC032101-1|AAH32101.1|  183|Homo sapiens jagunal homolog 1
           (Drosophila) protein.
          Length = 183

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 19/38 (50%), Positives = 26/38 (68%)
 Frame = +3

Query: 138 MASRGGVMVTGTNGADFEHREKVAIQYHISALNKSRLK 251
           MASR G    GT+G+DF+HRE+VA+ Y +S   K  +K
Sbjct: 1   MASRAGPRAAGTDGSDFQHRERVAMHYQMSVTLKYEIK 38



 Score = 32.3 bits (70), Expect = 1.8
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +1

Query: 598 GYPYGLLWYAFVLLASQVHFFQLYFSFNLLKAW 696
           G+    + Y  ++LA QVH +QLY+S  LL +W
Sbjct: 141 GFSAVSIMYLVLVLAVQVHAWQLYYSKKLLDSW 173


>AK074760-1|BAC11188.1|  183|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90279 fis, clone NT2RP1000448. ).
          Length = 183

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 19/38 (50%), Positives = 26/38 (68%)
 Frame = +3

Query: 138 MASRGGVMVTGTNGADFEHREKVAIQYHISALNKSRLK 251
           MASR G    GT+G+DF+HRE+VA+ Y +S   K  +K
Sbjct: 1   MASRAGPRTAGTDGSDFQHRERVAMHYQMSVTLKYEIK 38



 Score = 32.3 bits (70), Expect = 1.8
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +1

Query: 598 GYPYGLLWYAFVLLASQVHFFQLYFSFNLLKAW 696
           G+    + Y  ++LA QVH +QLY+S  LL +W
Sbjct: 141 GFSAVSIMYLVLVLAVQVHAWQLYYSKKLLDSW 173


>AK027508-1|BAB55163.1|  183|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14602 fis, clone NT2RP1000191. ).
          Length = 183

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 19/38 (50%), Positives = 26/38 (68%)
 Frame = +3

Query: 138 MASRGGVMVTGTNGADFEHREKVAIQYHISALNKSRLK 251
           MASR G    GT+G+DF+HRE+VA+ Y +S   K  +K
Sbjct: 1   MASRAGPRAAGTDGSDFQHRERVAMHYQMSVTLKYEIK 38



 Score = 30.7 bits (66), Expect = 5.6
 Identities = 20/84 (23%), Positives = 36/84 (42%)
 Frame = +2

Query: 257 VFFHHILFLGMMAKLSADVLDKLDIFILEVEELQIPPPLWWEYIWCXXXXXXXXXXXAIK 436
           ++ H +++L ++AK+S + L  L          Q+  P  WEY +            +  
Sbjct: 41  IYVHLVIWLLLVAKMSVEHLGLLS-------HDQVAMPYQWEYPYLLSILPSLLGLLSFP 93

Query: 437 RNNIRHLRQYVYGIVALGFCPLLY 508
           RNNI +L   +  +      PL+Y
Sbjct: 94  RNNISYLVLSMISMGLFSIAPLIY 117



 Score = 30.3 bits (65), Expect = 7.4
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 598 GYPYGLLWYAFVLLASQVHFFQLYFSFNLLKAW 696
           G+    + +  ++LA QVH +QLY+S  LL +W
Sbjct: 141 GFSAVSIMHLVLVLAVQVHAWQLYYSKKLLDSW 173


>AF212230-1|AAK14916.1|  183|Homo sapiens GL009 protein.
          Length = 183

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +3

Query: 138 MASRGGVMVTGTNGADFEHREKVAIQYHISALNKSRLK 251
           MASR G        +DF+HRE+VA+ Y +S   K  +K
Sbjct: 1   MASRAGPRARHRR-SDFQHRERVAMHYQMSVTLKYEIK 37



 Score = 31.5 bits (68), Expect = 3.2
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +1

Query: 622 YAFVLLASQVHFFQLYFSFNLLKAW 696
           Y  ++LA QVH +QLY+S  LL +W
Sbjct: 149 YLVLVLAVQVHAWQLYYSKKLLDSW 173


>BC044659-1|AAH44659.1| 1008|Homo sapiens helicase-like
           transcription factor protein.
          Length = 1008

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
 Frame = +3

Query: 21  KIKAKLKNPSQDYLNETQCVAALYNEIVFCC----FVLIFSQKMASRGGVMVTGTNGADF 188
           K+K KLKN   +     +  + +  ++ F C     V    +KM  +G   V G+   D 
Sbjct: 411 KMKGKLKNVQSETKGRAKGSSKVIEDVAFACALTSSVPTTKKKMLKKGACAVEGSKKTDV 470

Query: 189 EHREKVAI 212
           E R +  +
Sbjct: 471 EERPRTTL 478


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,208,250
Number of Sequences: 237096
Number of extensions: 2378738
Number of successful extensions: 4494
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4490
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)