Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20742
         (531 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    23   6.4  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    23   6.4  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   8.4  

>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = -2

Query: 530 KVNYFIYNFYYDIHLVCISGSLFMSDSLF*KFNFIPIQWKKQLLCKKYMILKTE 369
           KV YF+  F Y + LV +  +  +  +      FI  QW + L  K +    T+
Sbjct: 274 KVAYFLAIFPYVVMLVLLIRACTLEGAADGMLYFIKPQWDRILEAKVWYAAVTQ 327


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = -2

Query: 530 KVNYFIYNFYYDIHLVCISGSLFMSDSLF*KFNFIPIQWKKQLLCKKYMILKTE 369
           KV YF+  F Y + LV +  +  +  +      FI  QW + L  K +    T+
Sbjct: 274 KVAYFLAIFPYVVMLVLLIRACTLEGAADGMLYFIKPQWDRILEAKVWYAAVTQ 327


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 521 YFIYNFYYDIHLVCISGSLF 462
           +FI NF  +  L CISG  F
Sbjct: 365 FFITNFGINFILYCISGQNF 384


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 491,707
Number of Sequences: 2352
Number of extensions: 9261
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49051644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)