Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20741
         (694 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IB56 Cluster: Putative uncharacterized protein MAL8P1...    34   2.9  
UniRef50_UPI0000E4629D Cluster: PREDICTED: similar to ATP-bindin...    34   3.8  

>UniRef50_Q8IB56 Cluster: Putative uncharacterized protein
           MAL8P1.49; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL8P1.49 - Plasmodium
           falciparum (isolate 3D7)
          Length = 1466

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
 Frame = -2

Query: 660 YIKLIKHMFNQVLLNC---LSRKKLVKILIYAKCLLNFSHLQFIYEIKINLIDTYGPDTH 490
           Y +L+K        N     +R K   + IY K   NF H   IY+ K   I  Y    H
Sbjct: 215 YFELLKGEIKSTFFNLNIDKNRYKKENVHIYQKKYTNFCHSIVIYKYKP--IIKYEKKIH 272

Query: 489 TNIDLXXI*LRYYMQYL 439
            NI+   I + YY++YL
Sbjct: 273 NNINKKKIYIYYYIKYL 289


>UniRef50_UPI0000E4629D Cluster: PREDICTED: similar to ATP-binding
            cassette, sub-family C (CFTR/MRP), member 4; n=8;
            Deuterostomia|Rep: PREDICTED: similar to ATP-binding
            cassette, sub-family C (CFTR/MRP), member 4 -
            Strongylocentrotus purpuratus
          Length = 1440

 Score = 33.9 bits (74), Expect = 3.8
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = -2

Query: 519  LIDTYGPDTHTNIDLXXI*LRYYMQYLR-FVCEIKLLNYVQYTHFFVVYI 373
            ++DT  PD  T +D   +   YY+Q L  F+C   L ++++  HFF++ +
Sbjct: 869  IVDTVSPDK-TFVDEMDVDRPYYLQNLSIFLCLFILFSFIRNYHFFIILV 917


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,589,390
Number of Sequences: 1657284
Number of extensions: 9354943
Number of successful extensions: 20020
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20017
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)