Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20740
         (728 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83120-3|CAB05587.1|  419|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z83120-2|CAB05586.1|  883|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AC006608-10|AAF39754.1|  801|Caenorhabditis elegans Hypothetical...    29   3.4  
U67955-1|AAB07585.1|  140|Caenorhabditis elegans Galectin protei...    29   4.5  
AB038500-1|BAB11965.1|  140|Caenorhabditis elegans galectin LEC-...    29   4.5  
U23171-3|AAC46706.1| 1020|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z83223-6|CAB05719.1|  884|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z81538-6|CAB04387.1|  884|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z83120-3|CAB05587.1|  419|Caenorhabditis elegans Hypothetical
           protein R06A4.4b protein.
          Length = 419

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 62  IMAVTTIAGKGKGPIVDPALCRCCRSIKKC 151
           I A+ +  G+   P + P   RCC  I+KC
Sbjct: 118 ISAIVSAMGQSFLPYIQPVFTRCCSLIEKC 147


>Z83120-2|CAB05586.1|  883|Caenorhabditis elegans Hypothetical
           protein R06A4.4a protein.
          Length = 883

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 62  IMAVTTIAGKGKGPIVDPALCRCCRSIKKC 151
           I A+ +  G+   P + P   RCC  I+KC
Sbjct: 582 ISAIVSAMGQSFLPYIQPVFTRCCSLIEKC 611


>AC006608-10|AAF39754.1|  801|Caenorhabditis elegans Hypothetical
           protein C15F1.2 protein.
          Length = 801

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = +2

Query: 119 LCRCCRSIKKCRLLTSE 169
           + +CC SI+KC+LL+SE
Sbjct: 149 VAKCCPSIEKCKLLSSE 165


>U67955-1|AAB07585.1|  140|Caenorhabditis elegans Galectin protein 9
           protein.
          Length = 140

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -1

Query: 665 PL*HFYRFDQMVQLLPVLLHAVDEIPLAGDFRFPRPFQLLRA 540
           PL H   FD  +++ P   H      L GDF    PF+ ++A
Sbjct: 81  PLHHDQAFDLQIRVYPGYFHITTNGVLLGDFPHRLPFESIQA 122


>AB038500-1|BAB11965.1|  140|Caenorhabditis elegans galectin LEC-9
           protein.
          Length = 140

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -1

Query: 665 PL*HFYRFDQMVQLLPVLLHAVDEIPLAGDFRFPRPFQLLRA 540
           PL H   FD  +++ P   H      L GDF    PF+ ++A
Sbjct: 81  PLHHDQAFDLQIRVYPGYFHITTNGVLLGDFPHRLPFESIQA 122


>U23171-3|AAC46706.1| 1020|Caenorhabditis elegans Hypothetical
           protein K02A2.3 protein.
          Length = 1020

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -2

Query: 661 CSIFTGSIKWSSFSLYFFMRLTRSLLPATFAFLGLFSFFVP 539
           C I  G++   +  L FF  +T SLL A   F  +F+  VP
Sbjct: 526 CGILLGAVDKIAEVLDFFFLMTLSLLGAALCFFIMFASSVP 566


>Z83223-6|CAB05719.1|  884|Caenorhabditis elegans Hypothetical
           protein E01G4.6 protein.
          Length = 884

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/52 (25%), Positives = 26/52 (50%)
 Frame = +3

Query: 543 TKKLKRPRKAKVAGKRDLVNRMKKYREKLDHLIEPVKMLQRKEKSKPIMDHD 698
           T K      +K+A  +DL+N     +EK   + + ++  ++ EKS+ +   D
Sbjct: 384 TSKFDEKLSSKMAKLKDLINEALSEKEKSGEIEQAMEKFEKPEKSELVAMED 435


>Z81538-6|CAB04387.1|  884|Caenorhabditis elegans Hypothetical
           protein E01G4.6 protein.
          Length = 884

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/52 (25%), Positives = 26/52 (50%)
 Frame = +3

Query: 543 TKKLKRPRKAKVAGKRDLVNRMKKYREKLDHLIEPVKMLQRKEKSKPIMDHD 698
           T K      +K+A  +DL+N     +EK   + + ++  ++ EKS+ +   D
Sbjct: 384 TSKFDEKLSSKMAKLKDLINEALSEKEKSGEIEQAMEKFEKPEKSELVAMED 435


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,162,053
Number of Sequences: 27780
Number of extensions: 303830
Number of successful extensions: 892
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)