Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20739
         (770 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein ...    25   3.4  
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    24   4.5  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   7.9  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   7.9  

>AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein
           protein.
          Length = 168

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 14/51 (27%), Positives = 19/51 (37%)
 Frame = +2

Query: 251 HVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQ 403
           H +GGD ++ N TG          D  F  +   PG  +    G    G Q
Sbjct: 24  HSRGGDGSSANSTGNSDNNSAGVPDFGFNSQSNVPGFGNGQQPGQQQQGQQ 74


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 394 WFPVLHHHCQD 426
           W+P + HHC D
Sbjct: 100 WYPEIKHHCPD 110


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = +2

Query: 245 QFHVQGGD-FTNHNGTGGKSIYGNKFEDEN 331
           QF V+  D F +  G      YG K EDEN
Sbjct: 726 QFKVEYSDNFNSGYGLRNAVFYGGKREDEN 755


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -1

Query: 110  VNSDVEEYSW*RHFAGISNVSNLQNHHNDNASLVNA 3
            +NSD E Y+W   F     ++ L  H  DN   + A
Sbjct: 1704 MNSDYE-YNWKNGFGEDEQITILARHGEDNQLFLKA 1738


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 872,979
Number of Sequences: 2352
Number of extensions: 20195
Number of successful extensions: 40
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)