Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20739
(770 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 163 9e-41
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 163 9e-41
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 159 2e-39
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 156 2e-38
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 155 2e-38
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 155 3e-38
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 150 1e-36
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 149 3e-36
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 146 1e-35
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 145 2e-35
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 133 1e-31
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 133 1e-31
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 125 4e-29
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 120 1e-27
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 110 9e-25
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 109 2e-24
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 104 6e-23
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 90 2e-18
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 89 2e-18
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 86 3e-17
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 82 3e-16
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 77 2e-14
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 62 5e-10
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 45 6e-05
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 37 0.013
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 36 0.039
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 36 0.039
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 36 0.039
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 35 0.068
At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid t... 31 0.64
At5g07880.1 68418.m00908 SNAP25 homologous protein, putative / s... 30 1.9
At3g51360.1 68416.m05624 aspartyl protease family protein contai... 28 5.9
At1g72540.1 68414.m08388 protein kinase, putative similar to aux... 28 7.9
At1g23090.1 68414.m02887 sulfate transporter, putative similar t... 28 7.9
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 163 bits (397), Expect = 9e-41
Identities = 75/109 (68%), Positives = 86/109 (78%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F P F QGGDFT NGTGG+SIYG+KFEDENF KHTGPG+LSMANAGA
Sbjct: 53 LHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGA 112
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGRPLR 532
+TNGSQFFI TVKT WLDG+HVVFG VVEG++VVK IE G+S G+P +
Sbjct: 113 NTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTK 161
Score = 96.3 bits (229), Expect = 2e-20
Identities = 44/72 (61%), Positives = 55/72 (76%), Gaps = 7/72 (9%)
Frame = +3
Query: 72 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 230
M+ P+V+FD+T+D P G+IV+EL +D TP+T ENFRALCTGEKG G +KGS F
Sbjct: 1 MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKF 60
Query: 231 HRVIPNFMCKEG 266
HRVIPNFMC+ G
Sbjct: 61 HRVIPNFMCQGG 72
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 163 bits (397), Expect = 9e-41
Identities = 75/109 (68%), Positives = 85/109 (77%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F P F QGGDFT NGTGG+SIYG KFEDENF KHTGPG+LSMANAGA
Sbjct: 54 LHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGA 113
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGRPLR 532
+TNGSQFFI TVKT WLDG+HVVFG VVEG++VVK IE G+S G+P +
Sbjct: 114 NTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTK 162
Score = 97.5 bits (232), Expect = 9e-21
Identities = 47/71 (66%), Positives = 54/71 (76%), Gaps = 7/71 (9%)
Frame = +3
Query: 75 SLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFH 233
S P+VFFD+T+ AP GKIV+EL +D TPKT ENFRALCTGEKG G +KGS FH
Sbjct: 3 SHPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFH 62
Query: 234 RVIPNFMCKEG 266
RVIPNFMC+ G
Sbjct: 63 RVIPNFMCQGG 73
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 159 bits (385), Expect = 2e-39
Identities = 74/107 (69%), Positives = 82/107 (76%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F P F +QGGDFT+ NG GG+SIYG KF DENF LKHTGPGVLSMAN+G
Sbjct: 81 LHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGE 140
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGRP 526
DTNGSQFFITTV TSWLDGRHVVFG VV+GM+VV +IE G G P
Sbjct: 141 DTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTP 187
Score = 76.2 bits (179), Expect = 2e-14
Identities = 37/68 (54%), Positives = 45/68 (66%), Gaps = 7/68 (10%)
Frame = +3
Query: 84 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 242
+V+FDV +D G++VI L PKT ENFRALCTGEKG G YKGS FHR+I
Sbjct: 33 KVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRII 92
Query: 243 PNFMCKEG 266
P+FM + G
Sbjct: 93 PSFMIQGG 100
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 156 bits (378), Expect = 2e-38
Identities = 72/106 (67%), Positives = 83/106 (78%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F P+F QGGDFT NGTGG+SIYG+KF+DENF KHTGPG+LSMANAGA
Sbjct: 54 LHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGA 113
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGR 523
+TNGSQFFI T KTSWLDG+HVVFG VVEG+ VV+ IE G+ GR
Sbjct: 114 NTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGR 159
Score = 87.4 bits (207), Expect = 9e-18
Identities = 41/69 (59%), Positives = 50/69 (72%), Gaps = 7/69 (10%)
Frame = +3
Query: 81 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRV 239
P+V+FD+TV G+IV+EL +D TP+T ENFRALCTGE+G G YKGS FHRV
Sbjct: 5 PKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRV 64
Query: 240 IPNFMCKEG 266
IP FMC+ G
Sbjct: 65 IPKFMCQGG 73
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 514 SGKTSKRIVIKDCGQIA 564
SG+TSK +VI DCGQI+
Sbjct: 157 SGRTSKPVVIADCGQIS 173
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 155 bits (377), Expect = 2e-38
Identities = 71/107 (66%), Positives = 82/107 (76%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F P F QGGDFT NGTGG+SIYG+KFEDENF LKHTGPG+LSMAN+G
Sbjct: 53 LHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGP 112
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGRP 526
+TNGSQFFI T KTSWLDG+HVVFG VV+G VVK +E G+ +G P
Sbjct: 113 NTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNP 159
Score = 86.2 bits (204), Expect = 2e-17
Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 7/72 (9%)
Frame = +3
Query: 72 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 230
M+ P+VFFD+ + G++V+EL +DVTP+T NFRALCTGE G G YKGS F
Sbjct: 1 MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAF 60
Query: 231 HRVIPNFMCKEG 266
HR+IP FMC+ G
Sbjct: 61 HRIIPGFMCQGG 72
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 155 bits (376), Expect = 3e-38
Identities = 73/107 (68%), Positives = 80/107 (74%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F P F +QGGDFT+ NG GG+SIYG KF DENF LKHTGPG LSMANAG
Sbjct: 84 LHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQ 143
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGRP 526
DTNGSQFFITTV TSWLDGRHVVFG VV GM+VV ++E G G P
Sbjct: 144 DTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVEAEGNQSGTP 190
Score = 75.8 bits (178), Expect = 3e-14
Identities = 37/68 (54%), Positives = 45/68 (66%), Gaps = 7/68 (10%)
Frame = +3
Query: 84 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 242
+V+FDV +D G+IV+ L PKT ENFRALCTGEKG G YKGS FHR+I
Sbjct: 36 KVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRII 95
Query: 243 PNFMCKEG 266
P+FM + G
Sbjct: 96 PSFMLQGG 103
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 150 bits (363), Expect = 1e-36
Identities = 70/107 (65%), Positives = 80/107 (74%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F P F +QGGDFT +G GG+SIYG+KF DENF LKHTGPG LSMAN+G
Sbjct: 108 LYFKGSSFHRIIPGFMIQGGDFTRGDGRGGESIYGDKFADENFKLKHTGPGFLSMANSGP 167
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGRP 526
D+NGSQFFITTV TSWLDG HVVFG V+ GMEVV++IE G G P
Sbjct: 168 DSNGSQFFITTVTTSWLDGHHVVFGKVLSGMEVVRKIEAQGQDSGVP 214
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/68 (50%), Positives = 48/68 (70%), Gaps = 7/68 (10%)
Frame = +3
Query: 84 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 242
+V+FD+ ++ +P G+I+I L ++ PKT ENFR+LCTGEKG G +KGS FHR+I
Sbjct: 60 KVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFHRII 119
Query: 243 PNFMCKEG 266
P FM + G
Sbjct: 120 PGFMIQGG 127
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 149 bits (360), Expect = 3e-36
Identities = 67/96 (69%), Positives = 78/96 (81%)
Frame = +2
Query: 215 QGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 394
+G F F +QGGDFT NGTGG SIYG KFEDENFTLKHTGPG+LSMANAG +TN
Sbjct: 140 KGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTN 199
Query: 395 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIET 502
GSQFFI TVKTSWLD +HVVFG V+EGM++V+ +E+
Sbjct: 200 GSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLES 235
Score = 79.4 bits (187), Expect = 2e-15
Identities = 35/61 (57%), Positives = 45/61 (73%)
Frame = +3
Query: 84 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKE 263
+V+FDV + G+IV+ L +V PKT ENFRALCTGEK +GYKGS FHR+I +FM +
Sbjct: 96 KVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQG 155
Query: 264 G 266
G
Sbjct: 156 G 156
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 146 bits (354), Expect = 1e-35
Identities = 65/84 (77%), Positives = 71/84 (84%)
Frame = +2
Query: 248 FHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 427
F +QGGDF NGTGGKS+YG F+DENF L H GPGVLSMANAG +TNGSQFFI T+KT
Sbjct: 149 FMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKT 208
Query: 428 SWLDGRHVVFGNVVEGMEVVKQIE 499
SWLDGRHVVFG V+EGMEVVK IE
Sbjct: 209 SWLDGRHVVFGQVIEGMEVVKLIE 232
Score = 79.4 bits (187), Expect = 2e-15
Identities = 40/65 (61%), Positives = 49/65 (75%), Gaps = 4/65 (6%)
Frame = +3
Query: 84 RVFFDVTVDDAPLGK----IVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNF 251
+V+FD++V + P+GK IVI L D P+T ENFRALCTGEKGFGYKGS FHRVI +F
Sbjct: 91 KVYFDISVGN-PVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDF 149
Query: 252 MCKEG 266
M + G
Sbjct: 150 MIQGG 154
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 145 bits (352), Expect = 2e-35
Identities = 68/106 (64%), Positives = 80/106 (75%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F P F QGGDFT NGTGG+SIYG KF+DENF KHTG G+LSMAN+G
Sbjct: 53 LHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGP 112
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGR 523
+TNGSQFFI T KTSWLDG+HVVFG VV+G++VVK IE G+ G+
Sbjct: 113 NTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGK 158
Score = 93.5 bits (222), Expect = 1e-19
Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 7/72 (9%)
Frame = +3
Query: 72 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 230
MS PRVFFD+++ P+G+I +EL +D TP T ENFRALCTGEKG G +KGSIF
Sbjct: 1 MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIF 60
Query: 231 HRVIPNFMCKEG 266
HRVIP FMC+ G
Sbjct: 61 HRVIPGFMCQGG 72
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 514 SGKTSKRIVIKDCGQIA 564
SGKTSK + I DCGQ++
Sbjct: 156 SGKTSKVVTITDCGQLS 172
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 133 bits (322), Expect = 1e-31
Identities = 64/107 (59%), Positives = 74/107 (69%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F F QGGDF+N NGTGG+SIYG KF DENF L H G GVLSMAN G
Sbjct: 57 LHFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGP 116
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGRP 526
+TNGSQFFI + LDG+HVVFG VVEGM V+K++E G S G+P
Sbjct: 117 NTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTSDGKP 163
Score = 76.6 bits (180), Expect = 2e-14
Identities = 40/74 (54%), Positives = 47/74 (63%), Gaps = 8/74 (10%)
Frame = +3
Query: 69 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 224
K P VF DV++ P+ +IVIEL +DV PKT ENFRALCTGE G G +KGS
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62
Query: 225 IFHRVIPNFMCKEG 266
FHRVI FM + G
Sbjct: 63 SFHRVIKGFMAQGG 76
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 133 bits (322), Expect = 1e-31
Identities = 64/107 (59%), Positives = 74/107 (69%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F F QGGDF+N NGTGG+SIYG KF DENF L H G GVLSMAN G
Sbjct: 57 LHFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGP 116
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGRP 526
+TNGSQFFI + LDG+HVVFG VVEGM V+K++E G S G+P
Sbjct: 117 NTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTSDGKP 163
Score = 76.6 bits (180), Expect = 2e-14
Identities = 40/74 (54%), Positives = 47/74 (63%), Gaps = 8/74 (10%)
Frame = +3
Query: 69 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 224
K P VF DV++ P+ +IVIEL +DV PKT ENFRALCTGE G G +KGS
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62
Query: 225 IFHRVIPNFMCKEG 266
FHRVI FM + G
Sbjct: 63 SFHRVIKGFMAQGG 76
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 125 bits (301), Expect = 4e-29
Identities = 59/98 (60%), Positives = 73/98 (74%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F F +QGGD + ++GTGG+SIYG KF+DENF LKH G+LSMAN+G
Sbjct: 54 LHYKGNRFHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGP 113
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 499
+TNGSQFFITT +TS LDG+HVVFG V +GM VV+ IE
Sbjct: 114 NTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIE 151
Score = 70.9 bits (166), Expect = 9e-13
Identities = 37/73 (50%), Positives = 44/73 (60%), Gaps = 8/73 (10%)
Frame = +3
Query: 72 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGSI 227
M + F D+++ G+IVIEL DV PKT ENFR LCTGEKG G YKG+
Sbjct: 1 MGRSKCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNR 60
Query: 228 FHRVIPNFMCKEG 266
FHRVI FM + G
Sbjct: 61 FHRVIKGFMIQGG 73
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 120 bits (288), Expect = 1e-27
Identities = 54/85 (63%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Frame = +2
Query: 248 FHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 427
F VQ GDF ++G+G SIYG+KFEDENFT KHTGPG+LSMAN+G +TNG QFFIT K
Sbjct: 93 FMVQSGDFLKNDGSGCMSIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKC 152
Query: 428 SWLDGRHVVFGNVV-EGMEVVKQIE 499
WLD +HVVFG V+ +G+ V+++IE
Sbjct: 153 DWLDNKHVVFGRVLGDGLLVMRKIE 177
Score = 71.3 bits (167), Expect = 6e-13
Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Frame = +3
Query: 81 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE-----KGFGYKGSIFHRVIP 245
P VFFDV++ P G+I +EL +D+ PKT ENFR CTGE K GYK FHRVI
Sbjct: 32 PVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKECQFHRVIK 91
Query: 246 NFMCKEG 266
+FM + G
Sbjct: 92 DFMVQSG 98
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 110 bits (265), Expect = 9e-25
Identities = 57/98 (58%), Positives = 69/98 (70%), Gaps = 2/98 (2%)
Frame = +2
Query: 248 FHVQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 424
F VQGGD T G GG+SIYG+KFEDE N LKHTG G+LSMANAG +TNGSQFFIT
Sbjct: 58 FIVQGGDPTG-TGRGGESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAP 116
Query: 425 TSWLDGRHVVFGNVVEGMEVVKQIETFGA-SLGRPLRE 535
LDG+H +FG V GMEV+K++ + + RP+ E
Sbjct: 117 QPSLDGKHTIFGRVCRGMEVIKRLGSVQTDNTDRPIHE 154
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/66 (31%), Positives = 38/66 (57%)
Frame = +3
Query: 96 DVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSP 275
+VT++ + +G +E+ +P+TC NF L +G+ Y +FHR++ +F+ +G P
Sbjct: 11 EVTLETS-MGPFTVEMYYKHSPRTCRNFLEL--SRRGY-YDNVLFHRIVKDFIV-QGGDP 65
Query: 276 TITALG 293
T T G
Sbjct: 66 TGTGRG 71
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 109 bits (263), Expect = 2e-24
Identities = 53/111 (47%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F F +QGGD + +G SIYG F DENF ++H+ G+++MAN G
Sbjct: 96 LHYKGTPFHRIISGFVIQGGDIIHGDGKSSDSIYGGTFPDENFKIQHSHAGMVAMANTGP 155
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE-TFGASLGRPLRE 535
D+NGSQFFITTVK SWL+G HVV G V++GM+ V IE G G+P ++
Sbjct: 156 DSNGSQFFITTVKASWLEGEHVVLGKVIQGMDNVFAIEGGAGTYSGKPRKK 206
Score = 70.5 bits (165), Expect = 1e-12
Identities = 37/68 (54%), Positives = 43/68 (63%), Gaps = 7/68 (10%)
Frame = +3
Query: 84 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKG-------FGYKGSIFHRVI 242
RVF DV +D LG+IVI L V PKT ENFRALCTGEKG YKG+ FHR+I
Sbjct: 48 RVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRII 107
Query: 243 PNFMCKEG 266
F+ + G
Sbjct: 108 SGFVIQGG 115
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 104 bits (250), Expect = 6e-23
Identities = 52/85 (61%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = +2
Query: 248 FHVQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 424
F +Q GD +GTGG+SI+G +FEDE + +L+H P LSMANAG +TNGSQFFITTV
Sbjct: 524 FMIQTGDPLG-DGTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVA 582
Query: 425 TSWLDGRHVVFGNVVEGMEVVKQIE 499
T WLD +H VFG VV+GM+VV+ IE
Sbjct: 583 TPWLDNKHTVFGRVVKGMDVVQGIE 607
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = +3
Query: 120 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEG 266
LG I ++L + PKT ENF C G+ Y +FHRVI FM + G
Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHC--RNGY-YDNHLFHRVIRGFMIQTG 529
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 89.8 bits (213), Expect = 2e-18
Identities = 49/98 (50%), Positives = 61/98 (62%), Gaps = 2/98 (2%)
Frame = +2
Query: 248 FHVQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 424
F +QGGD G GG SI+G KF DE +LKH G+LSMAN+G +TNGSQFFIT K
Sbjct: 49 FMIQGGD-PKGTGKGGTSIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAK 107
Query: 425 TSWLDGRHVVFGNVVEGMEVVKQIETFGASLG-RPLRE 535
L+G + +FG V+ G EV+ +E G RPL E
Sbjct: 108 QPHLNGLYTIFGKVIHGFEVLDIMEKTQTGPGDRPLAE 145
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/58 (46%), Positives = 32/58 (55%)
Frame = +3
Query: 120 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPTITALG 293
LG I E+ D PK+ ENF ALC G+ Y G+IFHR I FM +G P T G
Sbjct: 9 LGDIKCEIFCDEVPKSAENFLALCA--SGY-YDGTIFHRNIKGFMI-QGGDPKGTGKG 62
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 89.4 bits (212), Expect = 2e-18
Identities = 46/107 (42%), Positives = 60/107 (56%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 385
L +G F Q GDF N NGT G+SIY KF DE+ L+H G+LSM+ A
Sbjct: 57 LHYKGSFFHRIMKGSSAQAGDFVNRNGTAGESIYAGKFPDESPKLRHEETGLLSMSIADR 116
Query: 386 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGASLGRP 526
D GS F IT LD +VVFG +++G E++K+IE G G+P
Sbjct: 117 DKFGSHFHITFRPNQQLDRNNVVFGKLIQGKEILKKIERVGDEEGKP 163
Score = 72.1 bits (169), Expect = 4e-13
Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 15/112 (13%)
Frame = +3
Query: 69 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 224
K P+VF DV++D P +V EL +V PKT ENFRALCTGEKG G YKGS
Sbjct: 3 KKKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGS 62
Query: 225 IFHRVIP-------NFMCKEGTSPTITALGESPSTAISLKTRISPLSTLDLA 359
FHR++ +F+ + GT+ G+ P + L+ + L ++ +A
Sbjct: 63 FFHRIMKGSSAQAGDFVNRNGTAGESIYAGKFPDESPKLRHEETGLLSMSIA 114
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 85.8 bits (203), Expect = 3e-17
Identities = 50/114 (43%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Frame = +2
Query: 200 ERLRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMAN 376
ER G+ F F +QGGD T G GG+SI+G F+DE N L H+G GV+SMAN
Sbjct: 376 ERGYYNGVAFHRSIRNFMIQGGDPTG-TGKGGESIWGKPFKDEPNSKLLHSGRGVVSMAN 434
Query: 377 AGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGA-SLGRPLRE 535
+G TNGSQFF+ + L+ +H VFG VV G+ + +E RPL E
Sbjct: 435 SGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAMENVPVDESDRPLEE 488
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/57 (49%), Positives = 34/57 (59%)
Frame = +3
Query: 123 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPTITALG 293
G + IEL D+ P+ CENF LC E+G+ Y G FHR I NFM +G PT T G
Sbjct: 353 GDLNIELHCDIAPRACENFITLC--ERGY-YNGVAFHRSIRNFMI-QGGDPTGTGKG 405
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 82.2 bits (194), Expect = 3e-16
Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 7/68 (10%)
Frame = +3
Query: 72 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 230
M+ P+VFFD+TVD P G+IVIEL +D+TP+T ENFR LCTGE+G G YKGS F
Sbjct: 1 MANPKVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTF 60
Query: 231 HRVIPNFM 254
++P+ M
Sbjct: 61 DHIVPDLM 68
Score = 57.2 bits (132), Expect = 1e-08
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Frame = +2
Query: 206 LRLQGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHT-GPGVLSMANAG 382
+ +G F P GGD N + I+ + +DE F L H GPG++SMA
Sbjct: 53 IHYKGSTFDHIVPDLMWCGGDIIFEN----EPIHSEELDDEYFILNHEDGPGIISMA--- 105
Query: 383 ADTNGSQFFITTVKTSW-LDGRHVVFGNVVEGMEVVKQIE 499
D+NGSQF I +DG HVV G VVEG+++++ IE
Sbjct: 106 -DSNGSQFQIHMKDYGLQVDGDHVVIGKVVEGLDLMRNIE 144
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 76.6 bits (180), Expect = 2e-14
Identities = 40/77 (51%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Frame = +2
Query: 242 PQFHVQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGA-DTNGSQFFIT 415
P F VQGGD T +GTGG SIYG F DE + L+ + G+++MANA + ++NGSQFF T
Sbjct: 59 PGFLVQGGDPTG-SGTGGDSIYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFT 117
Query: 416 TVKTSWLDGRHVVFGNV 466
K WLD +H +FG V
Sbjct: 118 LDKCDWLDKKHTIFGKV 134
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = +3
Query: 123 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPTITALG 293
G I +EL PK+ NF LC +G+ + +IFHRVIP F+ +G PT + G
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL--EGY-FDNTIFHRVIPGFLV-QGGDPTGSGTG 74
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 61.7 bits (143), Expect = 5e-10
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Frame = +2
Query: 182 CPVHWRERLRL------QGLHFPSCHPQFHVQGGDFTNHNGTGGKSIY----GNK---FE 322
CP+ + L+L G F + F Q GD T G GG SIY G + ++
Sbjct: 21 CPLTCKNFLKLCKIKYYNGCLFHTVQKDFTAQTGDPTG-TGAGGDSIYKFLYGEQARFYK 79
Query: 323 DE-NFTLKHTGPGVLSMANAGADTNGSQFFIT-TVKTSWLDGRHVVFGNVVEGMEVVKQI 496
DE + LKH+ G ++MA+ G + N SQF+ T +LDG+H VFG + EG + + +I
Sbjct: 80 DEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGKHTVFGQIAEGFDTLTRI 139
Query: 497 -ETFGASLGRPLR 532
E + RP +
Sbjct: 140 NEAYVDPKNRPYK 152
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/58 (46%), Positives = 32/58 (55%)
Frame = +3
Query: 120 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPTITALG 293
LG IVI+L SD P TC+NF LC K Y G +FH V +F + G PT T G
Sbjct: 9 LGDIVIDLHSDKCPLTCKNFLKLC---KIKYYNGCLFHTVQKDFTAQTG-DPTGTGAG 62
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 44.8 bits (101), Expect = 6e-05
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = +3
Query: 84 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFM 254
+ F DV++D P+G+I+I L D P F ++ +G+ G Y+ F +++P ++
Sbjct: 93 KAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYV 149
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +2
Query: 392 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 496
NG++F IT V + L+ +V G V+EGM VV+++
Sbjct: 230 NGTEFVITAVDSPELEDSVLVIGKVLEGMGVVEKM 264
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 111 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPTITAL 290
D G + IEL D P + F C + G+ +KG +F RV+ +F+ + G S A+
Sbjct: 83 DTGKGSVTIELFKDTAPNVVDQFMKFC--QDGY-FKGFLFSRVVKHFVIQAGDSAEFDAV 139
Score = 33.5 bits (73), Expect = 0.16
Identities = 24/95 (25%), Positives = 43/95 (45%)
Frame = +2
Query: 215 QGLHFPSCHPQFHVQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 394
+G F F +Q GD + ++ + +LKH ++ A +
Sbjct: 115 KGFLFSRVVKHFVIQAGDSAEFDAVKDWALDRKNIDT---SLKHE-EFMVGTPKAKNEQG 170
Query: 395 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 499
G +FFI + + L+ + VFG V +G +VV++IE
Sbjct: 171 GFEFFIVSAQIKDLNEKLTVFGRVSKGQDVVQEIE 205
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 35.5 bits (78), Expect = 0.039
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +3
Query: 123 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPT 278
G I +EL + +P+ + F LC + +KG F RVI N++ + G SP+
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPS 138
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 401 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 499
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 35.5 bits (78), Expect = 0.039
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +3
Query: 123 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPT 278
G I +EL + +P+ + F LC + +KG F RVI N++ + G SP+
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPS 138
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 401 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 499
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 35.5 bits (78), Expect = 0.039
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +3
Query: 123 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPT 278
G I +EL + +P+ + F LC + +KG F RVI N++ + G SP+
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPS 138
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 401 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 499
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 34.7 bits (76), Expect = 0.068
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 108 DDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIP 245
D PLG++V+ L P T F+ +CT YK + H++ P
Sbjct: 81 DSTPLGRVVLGLYGRHVPITVSTFKRMCT-SSSTSYKNTPVHKIFP 125
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 386 DTNGSQFFITTVK--TSWLDGRHVVFGNVVEGMEVVKQIET 502
D +F ITT + LDG ++VFG V+EG++VV I +
Sbjct: 191 DYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISS 231
>At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid
transfer protein (LTP)-related weak hit to Pfam PF00234:
Protease inhibitor/seed storage/LTP family
Length = 219
Score = 31.5 bits (68), Expect = 0.64
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = -3
Query: 498 SICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSS 319
++ T PS++ P TC ++E+ V+ P VS+P M TP P+C V F+SS
Sbjct: 22 AVTATQQAPSSSPPVLTC---TEEL--VMFSPCLPYVSSPPNNMSETPDPICCSV-FTSS 75
>At5g07880.1 68418.m00908 SNAP25 homologous protein, putative /
synaptosomal-associated protein SNAP25-like, putative
(SNAP29) identical to Swiss-Prot:Q9SD96 SNAP25
homologous protein SNAP29
(AtSNAP29)(Synaptosomal-associated protein SNAP25-like
2) [Arabidopsis thaliana]; contains Pfam profile:
PF05739 SNARE domain
Length = 251
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 162 KTCENFRALCTGEKGFGYKGSIFHRVIPNFMCKEGTSPTITALGESPS-TAISLKTR 329
KT + L GEK G G +F R + T P IT G+SP I LKTR
Sbjct: 106 KTVDLDHHLSRGEKILGRLGGVFSRTWKPKKSRSITGPVITK-GDSPKRKVIDLKTR 161
>At3g51360.1 68416.m05624 aspartyl protease family protein contains
Eukaryotic and viral aspartyl proteases active site,
PROSITE:PS00141
Length = 488
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -2
Query: 439 IQPGGLDSGDEELGTISISTGISHGEDARSSV--LKGEILVFKLIAVDGLSPSAVMVGEV 266
+ PG +G I +ST DAR + + ++ +FK +AV+G+ A+ V
Sbjct: 178 LSPGSKSTGVLVEDVIHMSTEEGEARDARITFGCSESQLGLFKEVAVNGIMGLAIADIAV 237
Query: 265 PSLHMKLGM 239
P++ +K G+
Sbjct: 238 PNMLVKAGV 246
>At1g72540.1 68414.m08388 protein kinase, putative similar to
auxin-regulated dual specificity cytosolic kinase
[Lycopersicon esculentum] gi|14484938|gb|AAK62821;
similar to serine/threonine protein kinase
gi|1066501|gb|AAA81538
Length = 450
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 55 LLIPAKCLYHEYSSTSLLTMPHWEKLLLS*EVTSLPRRVKTS 180
+ +P C+ + + T P EKLLL TS+P RV S
Sbjct: 8 ICLPISCINNTNQKKTTTTNPPKEKLLLLSRQTSVPSRVYMS 49
>At1g23090.1 68414.m02887 sulfate transporter, putative similar to
sulfate transporter [Arabidopsis thaliana] GI:2285885;
contains Pfam profiles PF00916: Sulfate transporter
family, PF01740: STAS domain
Length = 631
Score = 27.9 bits (59), Expect = 7.9
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +2
Query: 266 DFTNHNG-TGGKSIYGNKFEDENFTLKHTGPGVLSM---ANAGADTNGSQFFITTVKTSW 433
+F N N T S + + E+E KH+ L + A +G DTNG FF KT+
Sbjct: 517 NFANSNYLTERTSRWIEECEEEEAQEKHSSLQFLILEMSAVSGVDTNGVSFFKELKKTTA 576
Query: 434 LDGRHVVFGNVVEGMEVVKQIE 499
+VF N + EVV++++
Sbjct: 577 KKDIELVFVNPLS--EVVEKLQ 596
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,157,644
Number of Sequences: 28952
Number of extensions: 417941
Number of successful extensions: 1173
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1716774400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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