Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20738
(404 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 145 1e-35
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 140 4e-34
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 4e-34
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 136 6e-33
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 105 2e-23
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 87 7e-18
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 5e-10
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 57 5e-09
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 57 6e-09
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 57 6e-09
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 6e-09
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 57 6e-09
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 8e-09
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 56 8e-09
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-08
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-08
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 1e-07
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 3e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 46 2e-05
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 3e-05
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 44 4e-05
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 44 4e-05
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 36 0.013
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 35 0.029
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 32 0.15
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 1.1
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 28 2.5
SB_16139| Best HMM Match : rve (HMM E-Value=3.6e-21) 27 4.4
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.4
SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4) 27 5.8
SB_42132| Best HMM Match : DAGK_cat (HMM E-Value=1.3e-35) 27 7.7
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 145 bits (351), Expect = 1e-35
Identities = 65/79 (82%), Positives = 69/79 (87%)
Frame = +3
Query: 33 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 212
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 213 NEASGGKYVPRAILSTWSP 269
NEA+GGKYVPRA+L P
Sbjct: 265 NEATGGKYVPRAVLVDLEP 283
Score = 105 bits (251), Expect = 2e-23
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE
Sbjct: 279 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 324
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 140 bits (339), Expect = 4e-34
Identities = 62/70 (88%), Positives = 64/70 (91%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 240 PRAILSTWSP 269
PRAIL P
Sbjct: 61 PRAILVDLEP 70
Score = 105 bits (251), Expect = 2e-23
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE
Sbjct: 66 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 140 bits (339), Expect = 4e-34
Identities = 62/70 (88%), Positives = 64/70 (91%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 240 PRAILSTWSP 269
PRAIL P
Sbjct: 61 PRAILVDLEP 70
Score = 61.3 bits (142), Expect = 3e-10
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVF 334
+DLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 66 VDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 136 bits (329), Expect = 6e-33
Identities = 59/70 (84%), Positives = 64/70 (91%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 240 PRAILSTWSP 269
PR++L P
Sbjct: 61 PRSVLIDLEP 70
Score = 105 bits (252), Expect = 1e-23
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE
Sbjct: 66 IDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 105 bits (251), Expect = 2e-23
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE
Sbjct: 11 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 56
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 86.6 bits (205), Expect = 7e-18
Identities = 36/46 (78%), Positives = 40/46 (86%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAE
Sbjct: 22 VDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAE 67
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 60.5 bits (140), Expect = 5e-10
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 233
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 234 YVPRAILSTWSPA 272
+VPRA+ P+
Sbjct: 61 HVPRAVFVDLEPS 73
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 57.2 bits (132), Expect = 5e-09
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 233
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 234 YVPRAILSTWSP 269
+VPRA+ P
Sbjct: 61 HVPRAVFVDLEP 72
Score = 57.2 bits (132), Expect = 5e-09
Identities = 23/46 (50%), Positives = 32/46 (69%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKE 113
Score = 56.8 bits (131), Expect = 6e-09
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E
Sbjct: 501 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 546
Score = 55.2 bits (127), Expect = 2e-08
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 63 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 236
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 237 VPRAILSTWSP 269
VPRA+ P
Sbjct: 495 VPRAVFVDLEP 505
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 56.8 bits (131), Expect = 6e-09
Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 233
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 234 YVPRAILSTWSPAPWTLS 287
+VPRA+ P LS
Sbjct: 61 HVPRAVFVDLEPTVVALS 78
Score = 32.3 bits (70), Expect = 0.15
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 317 PDNFVFGQSGAGNNWAKGHYTEGAE 391
P+ + G+ A NN+A+GHYT G +
Sbjct: 79 PEQLITGKEDAANNYARGHYTIGKQ 103
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 56.8 bits (131), Expect = 6e-09
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E
Sbjct: 67 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 112
Score = 55.2 bits (127), Expect = 2e-08
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 63 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 236
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 237 VPRAILSTWSP 269
VPRA+ P
Sbjct: 61 VPRAVFVDLEP 71
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 56.8 bits (131), Expect = 6e-09
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E
Sbjct: 439 VDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 484
Score = 56.4 bits (130), Expect = 8e-09
Identities = 22/45 (48%), Positives = 31/45 (68%)
Frame = +2
Query: 257 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E
Sbjct: 873 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 917
Score = 54.8 bits (126), Expect = 3e-08
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 63 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 236
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 237 VPRAILSTWSP 269
VPRA+ + P
Sbjct: 866 VPRAVFADLEP 876
Score = 54.0 bits (124), Expect = 4e-08
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 63 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 236
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 237 VPRAILSTWSP 269
VPRA+ P
Sbjct: 433 VPRAVFVDLEP 443
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 56.8 bits (131), Expect = 6e-09
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E
Sbjct: 653 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 698
Score = 56.4 bits (130), Expect = 8e-09
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E
Sbjct: 132 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKE 177
Score = 55.6 bits (128), Expect = 1e-08
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 233
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 234 YVPRAILSTWSP 269
+VPRA+ P
Sbjct: 646 HVPRAVFVDLEP 657
Score = 55.2 bits (127), Expect = 2e-08
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 63 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 236
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 237 VPRAILSTWSP 269
VPRA+ P
Sbjct: 574 VPRAVFVDLEP 584
Score = 54.8 bits (126), Expect = 3e-08
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 63 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 236
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 237 VPRAILSTWSP 269
VPRA+ P
Sbjct: 126 VPRAVFVDLEP 136
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 56.4 bits (130), Expect = 8e-09
Identities = 22/45 (48%), Positives = 31/45 (68%)
Frame = +2
Query: 257 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E
Sbjct: 69 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 113
Score = 56.0 bits (129), Expect = 1e-08
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 233
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 234 YVPRAILSTWSP 269
+VPRA+ P
Sbjct: 61 HVPRAVFCDLEP 72
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 56.4 bits (130), Expect = 8e-09
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKE 113
Score = 56.0 bits (129), Expect = 1e-08
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 233
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 234 YVPRAILSTWSP 269
+VPRA+ P
Sbjct: 61 HVPRAVFVDLEP 72
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 56.0 bits (129), Expect = 1e-08
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G +
Sbjct: 486 VDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKD 531
Score = 55.2 bits (127), Expect = 2e-08
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = +2
Query: 257 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G +
Sbjct: 54 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQ 98
Score = 54.8 bits (126), Expect = 3e-08
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 63 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 236
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 237 VPRAILSTWSPA 272
VPRA+ P+
Sbjct: 480 VPRAVFVDLEPS 491
Score = 40.7 bits (91), Expect = 4e-04
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 105 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILSTWSP 269
+G WE+ EHGI P G D + + N +++E GK+VPRA+ P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEP 57
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 55.6 bits (128), Expect = 1e-08
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E
Sbjct: 33 VDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKE 78
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 52.4 bits (120), Expect = 1e-07
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E
Sbjct: 979 VDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 213 NEASGGKYVPRAILSTWSP 269
+EA+ GKYVPRA+L P
Sbjct: 965 SEAAAGKYVPRAVLVDLEP 983
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 48.0 bits (109), Expect = 3e-06
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +2
Query: 278 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
D VR+G + Q+F P+ + G+ A NN+A+GHYT G E
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 50
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 46.0 bits (104), Expect = 1e-05
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 227
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 228 GKY 236
GK+
Sbjct: 254 GKH 256
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 45.6 bits (103), Expect = 2e-05
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +2
Query: 284 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
VR+G + Q+F P+ + G+ A NN+A+GHYT G E
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 38
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 45.6 bits (103), Expect = 2e-05
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +2
Query: 284 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
VR+G + Q+F P+ + G+ A NN+A+GHYT G E
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 38
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 3e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +3
Query: 117 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 218
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 44.4 bits (100), Expect = 4e-05
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +2
Query: 284 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
VR G + +F PD + G+ A NN+A+GHYT G E
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKE 38
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 44.4 bits (100), Expect = 4e-05
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +2
Query: 284 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+R+G + Q+F P+ + G+ A NN+A+GHYT G E
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKE 38
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 35.9 bits (79), Expect = 0.013
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2
Query: 338 QSGAGNNWAKGHYTEGAE 391
Q+ A NNWAKG YTEGAE
Sbjct: 2 QNSAANNWAKGFYTEGAE 19
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 34.7 bits (76), Expect = 0.029
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 361
+D+E G ++++ GP +F + SG GNNW
Sbjct: 80 IDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 32.3 bits (70), Expect = 0.15
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 69 IVHIQAGQCGNQIGAKFWEIISDE 140
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 1.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 372 CPLAQLLPAPDCPKTKLSGRKICP 301
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 1.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 372 CPLAQLLPAPDCPKTKLSGRKICP 301
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 3.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 372 CPLAQLLPAPDCPKTKLSGRKICP 301
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
Score = 27.5 bits (58), Expect = 4.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 372 CPLAQLLPAPDCPKTKLSGRKICP 301
CPL ++L P CP ++ +CP
Sbjct: 51 CPLKEMLDTPLCPLKEMLDTPLCP 74
Score = 27.5 bits (58), Expect = 4.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 372 CPLAQLLPAPDCPKTKLSGRKICP 301
CPL ++L P CP ++ +CP
Sbjct: 73 CPLKEMLNTPLCPLKEMLNTPLCP 96
Score = 27.5 bits (58), Expect = 4.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 372 CPLAQLLPAPDCPKTKLSGRKICP 301
CPL ++L P CP ++ +CP
Sbjct: 128 CPLKEMLNTPLCPLKEMLNTPLCP 151
Score = 27.5 bits (58), Expect = 4.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 372 CPLAQLLPAPDCPKTKLSGRKICP 301
CPL ++L P CP ++ +CP
Sbjct: 139 CPLKEMLNTPLCPLKEMLNTPLCP 162
Score = 27.5 bits (58), Expect = 4.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 372 CPLAQLLPAPDCPKTKLSGRKICP 301
CPL ++L P CP ++ +CP
Sbjct: 150 CPLKEMLNTPLCPLKEMLNTPLCP 173
Score = 27.1 bits (57), Expect = 5.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 372 CPLAQLLPAPDCPKTKLSGRKICP 301
CPL ++L P CP ++ +CP
Sbjct: 7 CPLKEMLNTPLCPLKEMLDTPLCP 30
Score = 27.1 bits (57), Expect = 5.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 372 CPLAQLLPAPDCPKTKLSGRKICP 301
CPL ++L P CP ++ +CP
Sbjct: 29 CPLKKMLNTPLCPLKEMLNTPLCP 52
Score = 27.1 bits (57), Expect = 5.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 372 CPLAQLLPAPDCPKTKLSGRKICP 301
CPL ++L P CP ++ +CP
Sbjct: 40 CPLKEMLNTPLCPLKEMLDTPLCP 63
Score = 27.1 bits (57), Expect = 5.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 372 CPLAQLLPAPDCPKTKLSGRKICP 301
CPL ++L P CP ++ +CP
Sbjct: 161 CPLKEMLNTPLCPLKEMLDAPLCP 184
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.3 bits (60), Expect = 2.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 348 APDCPKTKLSGRKICPKGPERTESMVPGSKS 256
A DCP ++ +GR +CP P +S + +K+
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKA 168
>SB_16139| Best HMM Match : rve (HMM E-Value=3.6e-21)
Length = 889
Score = 27.5 bits (58), Expect = 4.4
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 359 SCCXXXXXXXRSCPDGRSVRKVQSGQSPWCRAPSREDGAGHVLAAGGFI 213
+CC S DG++ K +SG+ W E+G G GG++
Sbjct: 229 ACCGGNITIRDSQLDGKTPDKNESGKRVWYEEEEEEEGEGE----GGYV 273
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 215 IVVYIDALQLQVRVPM-VGTGGVDAVLVGDDLPEL 114
I VY DA++LQV P+ G+D + V D EL
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVEL 82
>SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4)
Length = 384
Score = 27.1 bits (57), Expect = 5.8
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2
Query: 376 VVSLGPVVAGAGLSEDEVVRTEDLSERSRADRVHGAGL 263
V++L PV+ G +++D V + RSR R H G+
Sbjct: 230 VIALKPVMRGPDINDDGSVCQKRRPNRSRCPRRHRCGI 267
>SB_42132| Best HMM Match : DAGK_cat (HMM E-Value=1.3e-35)
Length = 558
Score = 26.6 bits (56), Expect = 7.7
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 150 DPTGAYHGDSDLQLERINVYYNEASGG-KYVPRAILSTWS 266
D TGA G +D L++IN E + KY +L W+
Sbjct: 62 DATGAVKGSADANLQKINNQLKEENNYLKYKIDVLLDMWN 101
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,176,795
Number of Sequences: 59808
Number of extensions: 246091
Number of successful extensions: 748
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 727815563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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