Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20738
(404 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 140 3e-34
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 131 2e-31
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 129 9e-31
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 129 9e-31
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 124 2e-29
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 123 6e-29
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 101 3e-22
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 101 3e-22
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 64 4e-11
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 64 5e-11
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 62 1e-10
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 62 1e-10
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 61 3e-10
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 60 6e-10
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 60 6e-10
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 58 2e-09
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 58 2e-09
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 58 2e-09
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 58 2e-09
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 58 3e-09
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 58 3e-09
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 56 1e-08
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 54 3e-08
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 54 3e-08
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 54 4e-08
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 47 6e-06
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical pr... 28 2.9
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 28 2.9
Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical pr... 26 9.0
Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical pr... 26 9.0
AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical ... 26 9.0
AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical ... 26 9.0
AF357877-1|AAK27715.1| 835|Caenorhabditis elegans receptor-medi... 26 9.0
AC006695-13|AAF39978.1| 786|Caenorhabditis elegans Receptor med... 26 9.0
AC006695-11|AAF39979.1| 835|Caenorhabditis elegans Receptor med... 26 9.0
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 140 bits (339), Expect = 3e-34
Identities = 63/70 (90%), Positives = 65/70 (92%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 240 PRAILSTWSP 269
PRA L P
Sbjct: 61 PRACLVDLEP 70
Score = 103 bits (246), Expect = 6e-23
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAE
Sbjct: 66 VDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 131 bits (317), Expect = 2e-31
Identities = 57/70 (81%), Positives = 62/70 (88%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 240 PRAILSTWSP 269
PRA+L P
Sbjct: 61 PRAVLVDLEP 70
Score = 104 bits (249), Expect = 3e-23
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAE
Sbjct: 66 VDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 129 bits (311), Expect = 9e-31
Identities = 57/70 (81%), Positives = 61/70 (87%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 240 PRAILSTWSP 269
PRA+L P
Sbjct: 61 PRAVLVDLEP 70
Score = 103 bits (246), Expect = 6e-23
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAE
Sbjct: 66 VDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAE 111
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 129 bits (311), Expect = 9e-31
Identities = 57/70 (81%), Positives = 61/70 (87%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 240 PRAILSTWSP 269
PRA+L P
Sbjct: 61 PRAVLVDLEP 70
Score = 103 bits (246), Expect = 6e-23
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAE
Sbjct: 66 VDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAE 111
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 124 bits (299), Expect = 2e-29
Identities = 53/70 (75%), Positives = 61/70 (87%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 240 PRAILSTWSP 269
PRA+L P
Sbjct: 61 PRAVLVDLEP 70
Score = 104 bits (249), Expect = 3e-23
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAE
Sbjct: 66 VDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 123 bits (296), Expect = 6e-29
Identities = 52/70 (74%), Positives = 61/70 (87%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 240 PRAILSTWSP 269
PRA+L P
Sbjct: 61 PRAVLVDLEP 70
Score = 104 bits (249), Expect = 3e-23
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAE
Sbjct: 66 VDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 101 bits (241), Expect = 3e-22
Identities = 44/70 (62%), Positives = 51/70 (72%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 240 PRAILSTWSP 269
PRAIL P
Sbjct: 61 PRAILVDLDP 70
Score = 62.5 bits (145), Expect = 1e-10
Identities = 24/46 (52%), Positives = 38/46 (82%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE
Sbjct: 66 VDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAE 111
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 101 bits (241), Expect = 3e-22
Identities = 44/70 (62%), Positives = 51/70 (72%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 240 PRAILSTWSP 269
PRAIL P
Sbjct: 61 PRAILVDLDP 70
Score = 62.5 bits (145), Expect = 1e-10
Identities = 24/46 (52%), Positives = 38/46 (82%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE
Sbjct: 66 VDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAE 111
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 64.1 bits (149), Expect = 4e-11
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Frame = +3
Query: 54 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 227
N+ RE++ I GQ G Q+G WE+ EHGI P G + + L + + N +++E
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 228 GKYVPRAILSTWSPAP 275
GK+VPRAI+ P P
Sbjct: 64 GKHVPRAIMVDLEPTP 79
Score = 52.4 bits (120), Expect = 1e-07
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E
Sbjct: 73 VDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKE 118
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 63.7 bits (148), Expect = 5e-11
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Frame = +3
Query: 63 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGK 233
RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 234 YVPRAILSTWSP 269
+VPR + P
Sbjct: 67 HVPRCLFVDLEP 78
Score = 46.8 bits (106), Expect = 6e-06
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D VR+G + +F P+ + G+ A N +A+G YT G E
Sbjct: 74 VDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGRE 119
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 62.1 bits (144), Expect = 1e-10
Identities = 27/70 (38%), Positives = 36/70 (51%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 240 PRAILSTWSP 269
PR+I P
Sbjct: 61 PRSIFVDLEP 70
Score = 54.8 bits (126), Expect = 2e-08
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E
Sbjct: 66 VDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKE 111
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 62.1 bits (144), Expect = 1e-10
Identities = 27/70 (38%), Positives = 36/70 (51%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 240 PRAILSTWSP 269
PR+I P
Sbjct: 61 PRSIFVDLEP 70
Score = 54.8 bits (126), Expect = 2e-08
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E
Sbjct: 66 VDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKE 111
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 60.9 bits (141), Expect = 3e-10
Identities = 32/72 (44%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 233
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 234 YVPRAILSTWSP 269
+VPRAI P
Sbjct: 61 HVPRAIFVDLEP 72
Score = 55.6 bits (128), Expect = 1e-08
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G E
Sbjct: 68 VDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKE 113
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 60.1 bits (139), Expect = 6e-10
Identities = 27/70 (38%), Positives = 37/70 (52%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 240 PRAILSTWSP 269
PR+I P
Sbjct: 61 PRSIFVDLEP 70
Score = 54.8 bits (126), Expect = 2e-08
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E
Sbjct: 66 VDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKE 111
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 60.1 bits (139), Expect = 6e-10
Identities = 27/70 (38%), Positives = 37/70 (52%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 240 PRAILSTWSP 269
PR+I P
Sbjct: 61 PRSIFVDLEP 70
Score = 54.8 bits (126), Expect = 2e-08
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E
Sbjct: 66 VDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKE 111
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 58.4 bits (135), Expect = 2e-09
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D +R+G +G +F PD + G+ A NN+A+GHYT G E
Sbjct: 71 VDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKE 116
Score = 53.2 bits (122), Expect = 7e-08
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 63 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG-AYHGDSDLQLERINVYYNEASGGKYV 239
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 240 PRAILSTWSP 269
PRAI P
Sbjct: 66 PRAIYVDLEP 75
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 58.0 bits (134), Expect = 2e-09
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 233
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 234 YVPRAILSTWSP 269
+VPRA++ P
Sbjct: 61 HVPRAVMVDLEP 72
Score = 54.0 bits (124), Expect = 4e-08
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E
Sbjct: 68 VDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKE 113
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 58.0 bits (134), Expect = 2e-09
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 233
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 234 YVPRAILSTWSP 269
+VPRA++ P
Sbjct: 61 HVPRAVMVDLEP 72
Score = 54.0 bits (124), Expect = 4e-08
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E
Sbjct: 68 VDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKE 113
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 58.0 bits (134), Expect = 2e-09
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 233
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 234 YVPRAILSTWSP 269
+VPRA++ P
Sbjct: 61 HVPRAVMVDLEP 72
Score = 54.0 bits (124), Expect = 4e-08
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E
Sbjct: 68 VDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKE 113
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 57.6 bits (133), Expect = 3e-09
Identities = 25/70 (35%), Positives = 36/70 (51%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 240 PRAILSTWSP 269
PR+I P
Sbjct: 61 PRSIFVDLEP 70
Score = 54.4 bits (125), Expect = 3e-08
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E
Sbjct: 66 VDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKE 111
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 57.6 bits (133), Expect = 3e-09
Identities = 25/70 (35%), Positives = 36/70 (51%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 240 PRAILSTWSP 269
PR+I P
Sbjct: 61 PRSIFVDLEP 70
Score = 54.4 bits (125), Expect = 3e-08
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E
Sbjct: 66 VDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKE 111
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 56.0 bits (129), Expect = 1e-08
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +3
Query: 63 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 236
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 237 VPRAILSTWSP 269
VPRA++ P
Sbjct: 61 VPRAVMVDLEP 71
Score = 54.0 bits (124), Expect = 4e-08
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E
Sbjct: 67 VDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKE 112
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 54.4 bits (125), Expect = 3e-08
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +3
Query: 69 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 248
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 249 ILSTWSP 269
+L P
Sbjct: 66 VLVDLEP 72
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAE 391
+DLEP ++ + P F +F DN GAGNNWA G Y +G E
Sbjct: 68 VDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQE 115
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 54.4 bits (125), Expect = 3e-08
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +3
Query: 69 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 248
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 249 ILSTWSP 269
+L P
Sbjct: 66 VLVDLEP 72
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAE 391
+DLEP ++ + P F +F DN GAGNNWA G Y +G E
Sbjct: 68 VDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQE 115
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 54.0 bits (124), Expect = 4e-08
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E
Sbjct: 65 VDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKE 110
Score = 50.4 bits (115), Expect = 5e-07
Identities = 25/70 (35%), Positives = 37/70 (52%)
Frame = +3
Query: 60 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MRE++ I GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGRHV 59
Query: 240 PRAILSTWSP 269
PR+I P
Sbjct: 60 PRSIFVDLEP 69
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 46.8 bits (106), Expect = 6e-06
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 391
+DLEP +D VR+G + +F P+ + G+ A N +A+G YT G E
Sbjct: 46 VDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGRE 91
Score = 41.1 bits (92), Expect = 3e-04
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 138 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILSTWSP 269
EHGI P G YH + D + E IN ++ E +GGK+VPR + P
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEP 50
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 27.9 bits (59), Expect = 2.9
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 230 QVRAPRHPLDLEPGTMDSVRSGPFGQIF--RPDNFVFGQSGAGNNWAKGHYTEGAESS 397
Q AP P D P +M S SGP G + P + + +GN W + + G +S
Sbjct: 411 QSAAPT-PFDSPPPSMPSTSSGPSGALAPPPPPSHPIPRRVSGNGWPEENKENGTSTS 467
>Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical
protein C09H6.2a protein.
Length = 982
Score = 27.9 bits (59), Expect = 2.9
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 230 QVRAPRHPLDLEPGTMDSVRSGPFGQIF--RPDNFVFGQSGAGNNWAKGHYTEGAESS 397
Q AP P D P +M S SGP G + P + + +GN W + + G +S
Sbjct: 439 QSAAPT-PFDSPPPSMPSTSSGPSGALAPPPPPSHPIPRRVSGNGWPEENKENGTSTS 495
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 27.9 bits (59), Expect = 2.9
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 230 QVRAPRHPLDLEPGTMDSVRSGPFGQIF--RPDNFVFGQSGAGNNWAKGHYTEGAESS 397
Q AP P D P +M S SGP G + P + + +GN W + + G +S
Sbjct: 411 QSAAPT-PFDSPPPSMPSTSSGPSGALAPPPPPSHPIPRRVSGNGWPEENKENGTSTS 467
>Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 152 VDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 51
V V + D+PELS TS +DF H +L
Sbjct: 82 VSPVCIQTDMPELSETKAFKHTSAQRFDFNHRLL 115
>Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 152 VDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 51
V V + D+PELS TS +DF H +L
Sbjct: 82 VSPVCIQTDMPELSETKAFKHTSAQRFDFNHRLL 115
>AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 152 VDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 51
V V + D+PELS TS +DF H +L
Sbjct: 82 VSPVCIQTDMPELSETKAFKHTSAQRFDFNHRLL 115
>AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 152 VDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 51
V V + D+PELS TS +DF H +L
Sbjct: 82 VSPVCIQTDMPELSETKAFKHTSAQRFDFNHRLL 115
>AF357877-1|AAK27715.1| 835|Caenorhabditis elegans
receptor-mediated endocytosis 1isoform II protein.
Length = 835
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 334 EDEVVRTEDLSERSRADRVHGAGLQVERMARGTYLPPEA 218
E+ TEDLSERS ++ G VE +P E+
Sbjct: 125 EELNAETEDLSERSEVEKDEDLGRVVEEHKEPAQVPVES 163
>AC006695-13|AAF39978.1| 786|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform a protein.
Length = 786
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 334 EDEVVRTEDLSERSRADRVHGAGLQVERMARGTYLPPEA 218
E+ TEDLSERS ++ G VE +P E+
Sbjct: 76 EELNAETEDLSERSEVEKDEDLGRVVEEHKEPAQVPVES 114
>AC006695-11|AAF39979.1| 835|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform b protein.
Length = 835
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 334 EDEVVRTEDLSERSRADRVHGAGLQVERMARGTYLPPEA 218
E+ TEDLSERS ++ G VE +P E+
Sbjct: 125 EELNAETEDLSERSEVEKDEDLGRVVEEHKEPAQVPVES 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,864,267
Number of Sequences: 27780
Number of extensions: 174393
Number of successful extensions: 560
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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