Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20734
(689 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110500-9|CAE54920.1| 586|Caenorhabditis elegans Hypothetical ... 133 1e-31
AL110500-8|CAB60430.1| 551|Caenorhabditis elegans Hypothetical ... 133 1e-31
Z83125-8|CAB05623.1| 507|Caenorhabditis elegans Hypothetical pr... 33 0.25
L23646-2|AAK67235.1| 304|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z50740-2|CAA90608.1| 383|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical pr... 29 2.4
X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein. 29 2.4
Z81095-1|CAB03158.1| 667|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z50045-2|CAA90363.2| 485|Caenorhabditis elegans Hypothetical pr... 27 9.6
AF025459-4|AAB70984.2| 292|Caenorhabditis elegans Hypothetical ... 27 9.6
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 27 9.6
>AL110500-9|CAE54920.1| 586|Caenorhabditis elegans Hypothetical
protein Y87G2A.8b protein.
Length = 586
Score = 133 bits (322), Expect = 1e-31
Identities = 59/85 (69%), Positives = 73/85 (85%)
Frame = +3
Query: 258 LAKSRNVEQARDAMFSGQKINFTEDRAVLHIALRNRQNKPILVNGKDVSTDVNAVLEHMK 437
LAKSR VE++R+AMFS +KINFTE+RAVLH+ALRNR N+PILV+GKDV DVN VL HMK
Sbjct: 105 LAKSRGVEESRNAMFSAEKINFTENRAVLHVALRNRANRPILVDGKDVMPDVNRVLAHMK 164
Query: 438 EFSDQVVSGQWKGYTGKAITDVIKL 512
EF ++++SG W GYTGK ITDV+ +
Sbjct: 165 EFCNEIISGSWTGYTGKKITDVVNI 189
Score = 99 bits (238), Expect = 1e-21
Identities = 50/72 (69%), Positives = 54/72 (75%)
Frame = +2
Query: 473 GVYGKSYNRRDQIGIGGSDVGPLMVTEALKPYANHLKVHFVSNIDGTHLAEVLKKLNPET 652
G GK IGIGGSD+GPLMVTE+LK Y VHFVSN+DGTH+AEV KKLN ET
Sbjct: 177 GYTGKKITDVVNIGIGGSDLGPLMVTESLKNYQIGPNVHFVSNVDGTHVAEVTKKLNAET 236
Query: 653 ALFIIASKTFTT 688
LFIIASKTFTT
Sbjct: 237 TLFIIASKTFTT 248
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/72 (43%), Positives = 47/72 (65%)
Frame = +1
Query: 40 EPKINLKQDAAYQKLQQYYNVNSTKINMLQLFQQDRERFEKFSFCIPTPNDGDILLDYSK 219
E ++L QDA + +L+++ N +L+LF++D RFEKF+ TP DGD L D+SK
Sbjct: 33 EKAMSLSQDATFVELKRHVEANEKDAQLLELFEKDPARFEKFTRLFATP-DGDFLFDFSK 91
Query: 220 NRINSDVFKLLL 255
NRI + F+LL+
Sbjct: 92 NRITDESFQLLM 103
>AL110500-8|CAB60430.1| 551|Caenorhabditis elegans Hypothetical
protein Y87G2A.8a protein.
Length = 551
Score = 133 bits (322), Expect = 1e-31
Identities = 59/85 (69%), Positives = 73/85 (85%)
Frame = +3
Query: 258 LAKSRNVEQARDAMFSGQKINFTEDRAVLHIALRNRQNKPILVNGKDVSTDVNAVLEHMK 437
LAKSR VE++R+AMFS +KINFTE+RAVLH+ALRNR N+PILV+GKDV DVN VL HMK
Sbjct: 70 LAKSRGVEESRNAMFSAEKINFTENRAVLHVALRNRANRPILVDGKDVMPDVNRVLAHMK 129
Query: 438 EFSDQVVSGQWKGYTGKAITDVIKL 512
EF ++++SG W GYTGK ITDV+ +
Sbjct: 130 EFCNEIISGSWTGYTGKKITDVVNI 154
Score = 99 bits (238), Expect = 1e-21
Identities = 50/72 (69%), Positives = 54/72 (75%)
Frame = +2
Query: 473 GVYGKSYNRRDQIGIGGSDVGPLMVTEALKPYANHLKVHFVSNIDGTHLAEVLKKLNPET 652
G GK IGIGGSD+GPLMVTE+LK Y VHFVSN+DGTH+AEV KKLN ET
Sbjct: 142 GYTGKKITDVVNIGIGGSDLGPLMVTESLKNYQIGPNVHFVSNVDGTHVAEVTKKLNAET 201
Query: 653 ALFIIASKTFTT 688
LFIIASKTFTT
Sbjct: 202 TLFIIASKTFTT 213
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/69 (43%), Positives = 46/69 (66%)
Frame = +1
Query: 49 INLKQDAAYQKLQQYYNVNSTKINMLQLFQQDRERFEKFSFCIPTPNDGDILLDYSKNRI 228
++L QDA + +L+++ N +L+LF++D RFEKF+ TP DGD L D+SKNRI
Sbjct: 1 MSLSQDATFVELKRHVEANEKDAQLLELFEKDPARFEKFTRLFATP-DGDFLFDFSKNRI 59
Query: 229 NSDVFKLLL 255
+ F+LL+
Sbjct: 60 TDESFQLLM 68
>Z83125-8|CAB05623.1| 507|Caenorhabditis elegans Hypothetical
protein T15D6.10 protein.
Length = 507
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1
Query: 443 EFLHVF*YRIDISADILTVHQDRLVLTVTQSYMQYCPVFCEVY 315
E H F Y SA H+D++V+T+T M + ++C Y
Sbjct: 113 EHFHPFLYHTKPSAMSAFAHKDQIVVTLTSENMMHATMYCRYY 155
>L23646-2|AAK67235.1| 304|Caenorhabditis elegans Hypothetical
protein F44E2.10 protein.
Length = 304
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 37 MEPKINLKQDAAYQKLQQYYNVNSTKINMLQLFQQDRERFEKFSFCIPTPNDGD--ILLD 210
+E + +D Y+ N+ +++ ++++Q +R E FS+ +P DG+ I+L
Sbjct: 60 IEYSADTSEDGVSSDHGMQYSFNNAEVDDMEIYQTERWSKESFSYDVPISEDGEYVIILK 119
Query: 211 YSK 219
+S+
Sbjct: 120 FSE 122
>Z50740-2|CAA90608.1| 383|Caenorhabditis elegans Hypothetical
protein F31B12.3 protein.
Length = 383
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +3
Query: 288 RDAMFSGQKINFTEDRAVLHIALRNRQNKPILVNGKDVSTDVNAVLEHMKEFSDQVVSG 464
R+ MFS IN+ D+ + ++ + K I++ + T++N + + +F DQV+SG
Sbjct: 113 RNVMFS---INYLIDQKLFDKVVKPKTGKNIVIYKVKLLTNLNLSNKILFQFQDQVISG 168
>Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical
protein T02C12.1 protein.
Length = 1017
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/64 (32%), Positives = 29/64 (45%)
Frame = +2
Query: 488 SYNRRDQIGIGGSDVGPLMVTEALKPYANHLKVHFVSNIDGTHLAEVLKKLNPETALFII 667
SY D G G D+ L+ T LK +L++ F T++ EVL +NP L I
Sbjct: 2 SYGGHDPNGYGVEDL-VLLSTIDLKSVVQNLQLRFQKGRIYTYIGEVLVAVNPYRQLGIY 60
Query: 668 ASKT 679
T
Sbjct: 61 EKST 64
>X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein.
Length = 1017
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/64 (32%), Positives = 29/64 (45%)
Frame = +2
Query: 488 SYNRRDQIGIGGSDVGPLMVTEALKPYANHLKVHFVSNIDGTHLAEVLKKLNPETALFII 667
SY D G G D+ L+ T LK +L++ F T++ EVL +NP L I
Sbjct: 2 SYGGHDPNGYGVEDL-VLLSTIDLKSVVQNLQLRFQKGRIYTYIGEVLVAVNPYRQLGIY 60
Query: 668 ASKT 679
T
Sbjct: 61 EKST 64
>Z81095-1|CAB03158.1| 667|Caenorhabditis elegans Hypothetical
protein F59F4.1 protein.
Length = 667
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 506 QIGIGGSDVGPLMVTEALKPYANHLKVHFVSNIDGTHLAEVLKKLNPETALFI 664
++GI G+D G L+ + P L + N DGT++A KL T +F+
Sbjct: 239 KLGINGNDNGFLLFDKVRIPRKALLMRYAKVNPDGTYIAPAHSKLGYGTMVFV 291
>Z50045-2|CAA90363.2| 485|Caenorhabditis elegans Hypothetical
protein F38B2.3 protein.
Length = 485
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 613 GAVDVRY-EMDLKMISIGLQCFCDHERTHI*ASNTNLITSVIAFPVYP-FHCP 461
G +RY EM++ + I C C E+ ++ +++TS P YP +CP
Sbjct: 267 GISQMRYFEMNITKLEIPEACECSQEKVYVKVDQPSVLTS----PNYPEVYCP 315
>AF025459-4|AAB70984.2| 292|Caenorhabditis elegans Hypothetical
protein H14A12.3 protein.
Length = 292
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 360 NRQNKPILVNGKDVSTDVNAVLEHMK 437
N+ N+ + + KDV T + + LEH+K
Sbjct: 31 NKTNENLWIQRKDVDTTLRSALEHLK 56
>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
protein Y47G6A.17 protein.
Length = 1736
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 381 LVNGKDVSTDVNAVLEHMKEFSDQVVSGQWK 473
+V D DV+ +E KEF D+ V +W+
Sbjct: 1227 IVKNDDEQDDVSERIERFKEFLDEEVQTEWE 1257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,292,370
Number of Sequences: 27780
Number of extensions: 308297
Number of successful extensions: 742
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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