Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20733
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    81   8e-18
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    81   8e-18
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    71   8e-15
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   2.9  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   6.7  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   8.9  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   8.9  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 81.0 bits (191), Expect = 8e-18
 Identities = 34/48 (70%), Positives = 44/48 (91%)
 Frame = +3

Query: 510 VSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 653
           VS+LTIE+GIFEVK+TAGDTHLGGEDFDNR+V +  Q+FK+K+K D++
Sbjct: 35  VSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVEYCTQDFKKKHKADIS 82



 Score = 64.5 bits (150), Expect = 7e-13
 Identities = 30/33 (90%), Positives = 30/33 (90%)
 Frame = +1

Query: 409 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 507
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTF
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTF 33


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 81.0 bits (191), Expect = 8e-18
 Identities = 34/48 (70%), Positives = 44/48 (91%)
 Frame = +3

Query: 510 VSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 653
           VS+LTIE+GIFEVK+TAGDTHLGGEDFDNR+V +  Q+FK+K+K D++
Sbjct: 35  VSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVEYCTQDFKKKHKADIS 82



 Score = 64.5 bits (150), Expect = 7e-13
 Identities = 30/33 (90%), Positives = 30/33 (90%)
 Frame = +1

Query: 409 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 507
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTF
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTF 33


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 70.9 bits (166), Expect = 8e-15
 Identities = 28/47 (59%), Positives = 43/47 (91%)
 Frame = +3

Query: 510 VSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDL 650
           VSILTI++G+FEV +T+GDTHLGGEDFD +++++F++  K+K+KKD+
Sbjct: 34  VSILTIDNGVFEVVATSGDTHLGGEDFDQKVMDYFIKMVKQKHKKDI 80



 Score = 60.1 bits (139), Expect = 2e-11
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = +1

Query: 409 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 507
           INEPTAAAIAYGLDKKG  E+N+L++DLGGGTF
Sbjct: 1   INEPTAAAIAYGLDKKG-AEQNILVYDLGGGTF 32


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 364 TKDAGTISGLNVLRIINEPTAA 429
           TKDAG +S   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
 Frame = +3

Query: 240 PRKSVH-GAYENEGNCRSL------SRQNCAECSYHGSRVLQ*LSKTSHKRCR 377
           P    H GA+  EG C+S       +  + +EC  +G  V+   ++T+ K CR
Sbjct: 11  PAAGFHFGAFTCEG-CKSFFGRTYNNISSISECKNNGECVINKKNRTACKACR 62


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 553 PPPATPTWEVRTL 591
           PP   PTW VR L
Sbjct: 13  PPQEMPTWFVRWL 25


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 516 WTREGTAAEVKDKYIS 469
           WT   T A+V +KY+S
Sbjct: 437 WTSHLTQADVIEKYLS 452


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,976
Number of Sequences: 336
Number of extensions: 3647
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)