Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20733
(655 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 156 3e-39
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 151 9e-38
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 142 5e-35
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 135 5e-33
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 130 2e-31
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 69 8e-13
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 59 6e-10
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 46 6e-06
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 30 0.25
SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr ... 25 7.2
SPAC24C9.08 |||vacuolar carboxypeptidase |Schizosaccharomyces po... 25 7.2
SPBC19G7.18c ||SPBC19G7.11c|sequence orphan|Schizosaccharomyces ... 25 7.2
SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|... 25 9.5
SPAC1F5.09c |shk2|pak2|PAK-related kinase Shk2 |Schizosaccharomy... 25 9.5
SPAC22E12.10c |etp1|cox15|mitochondrial type I [2Fe-2S] ferredox... 25 9.5
SPBC2G5.05 |||transketolase |Schizosaccharomyces pombe|chr 2|||M... 25 9.5
SPAC1527.03 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 25 9.5
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 156 bits (378), Expect = 3e-39
Identities = 72/93 (77%), Positives = 81/93 (87%)
Frame = +2
Query: 2 TTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS 181
TTPSYVAFTDTERLIGDAAKNQVAMNP+NTIFDAKRLIGRKF+D VQ+DMKHWPF+V+S
Sbjct: 35 TTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVIS 94
Query: 182 DGGKPKIKVAYKGEDKTFFPEEVSSWCLRK*RK 280
GKP ++V YKGE KTF PEE+SS L K R+
Sbjct: 95 KDGKPVLQVEYKGETKTFTPEEISSMVLMKMRE 127
Score = 145 bits (352), Expect = 4e-36
Identities = 71/90 (78%), Positives = 76/90 (84%)
Frame = +1
Query: 238 PRGSQFMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINE 417
P MVL KM+ETAEAYLG V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINE
Sbjct: 114 PEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINE 173
Query: 418 PTAAAIAYGLDKKGTGERNVLIFDLGGGTF 507
PTAAAIAYGLD+ GE NVLIFDLGGGTF
Sbjct: 174 PTAAAIAYGLDRSNQGESNVLIFDLGGGTF 203
Score = 91.1 bits (216), Expect = 1e-19
Identities = 39/47 (82%), Positives = 46/47 (97%)
Frame = +3
Query: 510 VSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDL 650
VS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VNHF+QEFKRK KKD+
Sbjct: 205 VSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFIQEFKRKNKKDI 251
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 151 bits (366), Expect = 9e-38
Identities = 70/93 (75%), Positives = 79/93 (84%)
Frame = +2
Query: 2 TTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS 181
TTPSYVAFTDTERLIGDAAKNQVAMNP+NTIFDAKRLIGR+F D VQ+DMKHWPF+V+
Sbjct: 35 TTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIE 94
Query: 182 DGGKPKIKVAYKGEDKTFFPEEVSSWCLRK*RK 280
GKP I+V +KGE KTF PEE+SS L K R+
Sbjct: 95 KDGKPLIQVEFKGETKTFTPEEISSMVLLKMRE 127
Score = 139 bits (336), Expect = 4e-34
Identities = 68/90 (75%), Positives = 75/90 (83%)
Frame = +1
Query: 238 PRGSQFMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINE 417
P MVL KM+E+AEA+LG V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINE
Sbjct: 114 PEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINE 173
Query: 418 PTAAAIAYGLDKKGTGERNVLIFDLGGGTF 507
PTAAAIAYGLD+ E NVLIFDLGGGTF
Sbjct: 174 PTAAAIAYGLDRSNQHETNVLIFDLGGGTF 203
Score = 89.8 bits (213), Expect = 3e-19
Identities = 39/47 (82%), Positives = 45/47 (95%)
Frame = +3
Query: 510 VSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDL 650
VS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VNHF QEFKRK KKD+
Sbjct: 205 VSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFAQEFKRKNKKDI 251
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 142 bits (343), Expect = 5e-35
Identities = 66/97 (68%), Positives = 83/97 (85%)
Frame = +1
Query: 217 G*RQNLFPRGSQFMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN 396
G ++ P M+L+KMK+TAEAYLGK V +AV+TVPAYFND+QRQATKDAGTI+GLN
Sbjct: 140 GKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLN 199
Query: 397 VLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 507
V+RI+NEPTAAAIAYGLDK T E++++++DLGGGTF
Sbjct: 200 VIRIVNEPTAAAIAYGLDKTDT-EKHIVVYDLGGGTF 235
Score = 111 bits (268), Expect = 6e-26
Identities = 50/89 (56%), Positives = 66/89 (74%)
Frame = +2
Query: 5 TPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD 184
TPSYVAFT+ ERL+G+AAKNQ NP NTIFD KRLIGRKF++ T+ D+K +PF +V+D
Sbjct: 69 TPSYVAFTEDERLVGEAAKNQAPSNPENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVND 128
Query: 185 GGKPKIKVAYKGEDKTFFPEEVSSWCLRK 271
+P ++V G+ K F PEE+S+ L K
Sbjct: 129 KNRPLVEVNVGGKKKKFTPEEISAMILSK 157
Score = 66.1 bits (154), Expect = 4e-12
Identities = 26/47 (55%), Positives = 39/47 (82%)
Frame = +3
Query: 510 VSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDL 650
VS+L+I++G+FEV +T+GDTHLGGEDFDNR++N+ + + RK D+
Sbjct: 237 VSLLSIDNGVFEVLATSGDTHLGGEDFDNRVINYLARTYNRKNNVDV 283
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 135 bits (327), Expect = 5e-33
Identities = 67/84 (79%), Positives = 72/84 (85%)
Frame = +1
Query: 256 MVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAI 435
MVLTKMKE +EA L K V+ AVITVPAYF+DSQR ATKDAG I+GLNVLRIINEPTAAAI
Sbjct: 124 MVLTKMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAI 183
Query: 436 AYGLDKKGTGERNVLIFDLGGGTF 507
AYGLD K +NVLIFDLGGGTF
Sbjct: 184 AYGLDAKSDKPKNVLIFDLGGGTF 207
Score = 130 bits (315), Expect = 1e-31
Identities = 57/94 (60%), Positives = 74/94 (78%)
Frame = +2
Query: 2 TTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS 181
TTPS+VAFT+TERL+GDAAKNQ AMNP NT+FDAKRLIGR++ED Q D+KHWPF+V+
Sbjct: 39 TTPSFVAFTETERLVGDAAKNQAAMNPRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVID 98
Query: 182 DGGKPKIKVAYKGEDKTFFPEEVSSWCLRK*RKL 283
+ G P I+V Y GE K F +E+S+ L K +++
Sbjct: 99 NNGIPTIEVNYLGEKKQFTAQEISAMVLTKMKEI 132
Score = 77.8 bits (183), Expect = 1e-15
Identities = 33/48 (68%), Positives = 41/48 (85%)
Frame = +3
Query: 510 VSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 653
VS+L I+ G+FEV +TAGDTHLGGEDFDN +V HF+QEFKRK K D++
Sbjct: 209 VSLLKIQGGVFEVLATAGDTHLGGEDFDNALVEHFIQEFKRKQKIDIS 256
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 130 bits (313), Expect = 2e-31
Identities = 61/83 (73%), Positives = 72/83 (86%)
Frame = +1
Query: 259 VLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIA 438
+L+KM+ETA YLGK V+NAV+TVPAYFNDSQRQATK AG I+GLNVLR++NEPTAAA+A
Sbjct: 167 ILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALA 226
Query: 439 YGLDKKGTGERNVLIFDLGGGTF 507
YGLDKK + V +FDLGGGTF
Sbjct: 227 YGLDKK--NDAIVAVFDLGGGTF 247
Score = 76.2 bits (179), Expect = 4e-15
Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Frame = +2
Query: 2 TTPSYVAFT-DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 178
TTPS VAFT D ERL+G +AK Q +NP NT F KRLIGR+F++ VQ D+K P+++V
Sbjct: 83 TTPSVVAFTKDGERLVGVSAKRQAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIV 142
Query: 179 SDGGKPKIKVAYKGEDKTFFPEEVSSWCLRK*RK 280
+ KT+ P ++ + L K R+
Sbjct: 143 EHSNG---DAWLEARGKTYSPSQIGGFILSKMRE 173
Score = 63.3 bits (147), Expect = 3e-11
Identities = 27/48 (56%), Positives = 36/48 (75%)
Frame = +3
Query: 510 VSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 653
+SIL + +G+FEV+ST GDTHLGGEDFD +V H V+ FK+ DL+
Sbjct: 249 ISILELNNGVFEVRSTNGDTHLGGEDFDVALVRHIVETFKKNEGLDLS 296
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 68.5 bits (160), Expect = 8e-13
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Frame = +1
Query: 265 TKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 444
TK+K AEA L +V + VI++PA+F D QR+A +A I+GLN LR++N+ AAA+ YG
Sbjct: 127 TKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYG 186
Query: 445 LDKKGTGE----RNVLIFDLGGGTFA 510
+ K E R V I D G ++
Sbjct: 187 ITKTDLPEPESPRRVAIVDFGHSNYS 212
Score = 46.4 bits (105), Expect = 4e-06
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +3
Query: 510 VSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDL 650
VSI+ G F +KST D +LG + D ++++F EFK KYK D+
Sbjct: 213 VSIVEFSRGQFHIKSTVCDRNLGSRNMDKALIDYFAAEFKEKYKIDV 259
Score = 45.6 bits (103), Expect = 6e-06
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 2 TTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVV 178
+TPS V++ + R +G+AAK+ A N NT+ KRL GR ++D ++ + ++
Sbjct: 38 STPSLVSYGERSRFLGEAAKSAEASNFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLT 97
Query: 179 SDGGKPKIKVAYKGEDKTF 235
G KV Y E+ F
Sbjct: 98 EVDGFVGAKVQYLNEETAF 116
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 58.8 bits (136), Expect = 6e-10
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +1
Query: 262 LTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAY 441
L ++ E+AE +LG V V++VP YF D+QR+A + A +GL VL++I++P A +A
Sbjct: 148 LRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVILAL 207
Query: 442 GLDKKGTGERNVLIFDLG 495
++ ++ V++ + G
Sbjct: 208 MYSEEVLIDKTVVVANFG 225
Score = 38.3 bits (85), Expect = 0.001
Identities = 14/42 (33%), Positives = 29/42 (69%)
Frame = +3
Query: 510 VSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK 635
VS+++++ G+ + ++ D +LGGE + +VN F +EF++K
Sbjct: 231 VSVVSVKGGLMTILASVHDENLGGEQLTDVLVNFFAKEFEKK 272
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 45.6 bits (103), Expect = 6e-06
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 283 AEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK-G 459
AE + + + V+TVP +FN+ QR +A I +VL +I++ A AI Y L +
Sbjct: 152 AEEMAHEKITDLVLTVPPHFNELQRSILLEAARILNKHVLALIDDNVAVAIEYSLSRSFS 211
Query: 460 TGERNVLIFDLGGGT 504
T +I+D G G+
Sbjct: 212 TDPTYNIIYDSGSGS 226
Score = 25.8 bits (54), Expect = 5.5
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +2
Query: 11 SYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRK-FEDATVQADMKHWP 166
S VAF ER+ G A N P ++I + K L+ E VQ +P
Sbjct: 59 SAVAFKGNERIFGVDASNLATRFPAHSIRNVKELLDTAGLESVLVQKYQSSYP 111
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 30.3 bits (65), Expect = 0.25
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +2
Query: 17 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKP 196
+ F+D E GD A + P + AK L+G+ + + D P++V+ D P
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYDRLGP 184
Query: 197 KIKVAYKGEDKTFFPE 244
+K+ G + F +
Sbjct: 185 -LKLMIDGTVRNFIAQ 199
>SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 384
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 628 LNSWTKWFTMRLSKSSPPKWVSPAVDF 548
LN K+ SK P W+SPA DF
Sbjct: 256 LNYKNKFVNAWQSKVGPLPWMSPATDF 282
>SPAC24C9.08 |||vacuolar carboxypeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 596
Score = 25.4 bits (53), Expect = 7.2
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = -3
Query: 584 LTSQVGVAGGGFHLEDTILDGKDGHAKVPPPRSKISTFRSPVPFLSRP 441
L + V VA G+ L GHA +PPP + I V + P
Sbjct: 307 LFATVCVAEKGYMDVHLKLKTPGGHASIPPPHTNIGLMSKLVTQIEEP 354
>SPBC19G7.18c ||SPBC19G7.11c|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 252
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 275 RKLPKLISAKLCRMQLSRFPRTSMTLKDKPQKMQVP-SQA*TFSESSMNP 421
RK+ + + M+ RFP +S K K Q+P S T + SS +P
Sbjct: 98 RKIQDSLIRQRTTMRQGRFPSSSSEFPPKNSKYQLPGSMPNTGASSSQDP 147
>SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 330
Score = 25.0 bits (52), Expect = 9.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 220 TLICYLDLRFASITDNLERPVLHVGLHSSIFELTSDETFGI 98
T I L + S+TDN+ER + +G + I +TS F +
Sbjct: 142 TNIALLLATYPSVTDNIER-FIFMGGSTGIGNITSQAEFNV 181
>SPAC1F5.09c |shk2|pak2|PAK-related kinase Shk2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 589
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 225 TKPFSPRKSVHGAYENEGNCRSLSRQ 302
+ P +P+ VH +NEGN L ++
Sbjct: 130 SSPMNPKHQVHVGIDNEGNYVGLPKE 155
>SPAC22E12.10c |etp1|cox15|mitochondrial type I [2Fe-2S] ferredoxin
Etp1/ cytochrome oxidase cofactor Cox15,
fusion|Schizosaccharomyces pombe|chr 1|||Manual
Length = 631
Score = 25.0 bits (52), Expect = 9.5
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -1
Query: 634 FLLNSWTKWFTMRLSKSSPPKWVSPAVDFTSKIPSSMV 521
F NS+ K+F RLS S P + T KIPS V
Sbjct: 62 FNKNSFEKFFARRLSNSVAPT-PGGILQETEKIPSKKV 98
>SPBC2G5.05 |||transketolase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 685
Score = 25.0 bits (52), Expect = 9.5
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -3
Query: 620 LDKVVHHAIVKVLTSQVGVAGGGFHLEDTILDGKDGHAKVPPPRSKISTF 471
L ++V A+ VL VG G L + L +G A PP SK+ T+
Sbjct: 365 LSEIVLDALCPVLPELVG---GSADLTPSNLTRWEGAADFQPPSSKLGTY 411
>SPAC1527.03 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 475
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 215 KGEDKTFFPEEVSSWCLRK*RKLPK 289
K + + + P V+ W LRK + +PK
Sbjct: 67 KSKSEDYQPSNVNVWALRKEKMIPK 91
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,906,674
Number of Sequences: 5004
Number of extensions: 62011
Number of successful extensions: 214
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 212
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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