BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20733 (655 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 154 7e-38 SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 150 8e-37 SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 149 3e-36 SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 146 2e-35 SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 89 2e-18 SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 89 3e-18 SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 4e-13 SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 5e-10 SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09 SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 35 0.067 SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) 30 1.9 SB_41989| Best HMM Match : RVT_1 (HMM E-Value=1.2e-33) 29 2.5 SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 3.3 SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 3.3 SB_43194| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6 SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05) 28 7.6 SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2) 28 7.6 >SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) Length = 1097 Score = 154 bits (373), Expect = 7e-38 Identities = 76/97 (78%), Positives = 84/97 (86%) Frame = +1 Query: 217 G*RQNLFPRGSQFMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN 396 G +++ FP MVLTKMKETAEAYLG V +AV+TVPAYF+DSQRQATKDAGTI+GLN Sbjct: 109 GEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLN 168 Query: 397 VLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 507 VLRIINEPTAAAIAYGLDKK ERNVLI+DLGGGTF Sbjct: 169 VLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTF 205 Score = 148 bits (359), Expect = 3e-36 Identities = 66/90 (73%), Positives = 76/90 (84%) Frame = +2 Query: 2 TTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS 181 TTPSYVAF+DTERLIGDAAKNQVAMNP NT+FDAKRLIGRKF+D V DM HWPF V+ Sbjct: 37 TTPSYVAFSDTERLIGDAAKNQVAMNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIR 96 Query: 182 DGGKPKIKVAYKGEDKTFFPEEVSSWCLRK 271 +G +PKI+V +KGE K+FFPEE+SS L K Sbjct: 97 EGERPKIQVEFKGEKKSFFPEEISSMVLTK 126 Score = 93.9 bits (223), Expect = 1e-19 Identities = 40/47 (85%), Positives = 47/47 (100%) Frame = +3 Query: 510 VSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDL 650 VS+LTIEDGIFEVKSTAGDTHLGGEDFDN+MV+HFV++FK+KYKKD+ Sbjct: 207 VSVLTIEDGIFEVKSTAGDTHLGGEDFDNKMVDHFVKQFKQKYKKDI 253 >SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) Length = 640 Score = 150 bits (364), Expect = 8e-37 Identities = 72/84 (85%), Positives = 79/84 (94%) Frame = +1 Query: 256 MVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAI 435 MVL KMKETAEAYLG+ V +AVITVPAYFNDSQRQATKDAGTI+GLNVLR+INEPTAAA+ Sbjct: 122 MVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAAL 181 Query: 436 AYGLDKKGTGERNVLIFDLGGGTF 507 AYGLDK +GE+NVLIFDLGGGTF Sbjct: 182 AYGLDKSLSGEKNVLIFDLGGGTF 205 Score = 149 bits (361), Expect = 2e-36 Identities = 67/90 (74%), Positives = 78/90 (86%) Frame = +2 Query: 2 TTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS 181 TTPSYV FTDTERL+GDAAKNQVA+NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++S Sbjct: 37 TTPSYVGFTDTERLVGDAAKNQVALNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIIS 96 Query: 182 DGGKPKIKVAYKGEDKTFFPEEVSSWCLRK 271 D KPKI+V YKGE KTF EE+SS L K Sbjct: 97 DNNKPKIQVEYKGERKTFAAEEISSMVLGK 126 Score = 92.3 bits (219), Expect = 3e-19 Identities = 42/49 (85%), Positives = 47/49 (95%), Gaps = 1/49 (2%) Frame = +3 Query: 510 VSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 653 VSILTI+DG +FEVKSTAGDTHLGGEDFDNR+VNHFV EFKRKYKKD++ Sbjct: 207 VSILTIDDGSLFEVKSTAGDTHLGGEDFDNRLVNHFVAEFKRKYKKDMS 255 >SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 746 Score = 149 bits (360), Expect = 3e-36 Identities = 74/84 (88%), Positives = 76/84 (90%) Frame = +1 Query: 256 MVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAI 435 MVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAI Sbjct: 215 MVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPTAAAI 274 Query: 436 AYGLDKKGTGERNVLIFDLGGGTF 507 AYGLDKK ERNVLIFDLGGGTF Sbjct: 275 AYGLDKKVGQERNVLIFDLGGGTF 298 Score = 145 bits (351), Expect = 3e-35 Identities = 65/83 (78%), Positives = 73/83 (87%) Frame = +2 Query: 2 TTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS 181 TTPSYVAFTD ERL+GDAAKNQVAMNP NTIFDAKRLIGR+F+D V+ DMKHW FEVV+ Sbjct: 37 TTPSYVAFTDEERLVGDAAKNQVAMNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVN 96 Query: 182 DGGKPKIKVAYKGEDKTFFPEEV 250 + G+PK+KV YKGE KTFF EEV Sbjct: 97 EAGRPKVKVEYKGETKTFFAEEV 119 Score = 85.4 bits (202), Expect = 4e-17 Identities = 37/47 (78%), Positives = 44/47 (93%) Frame = +3 Query: 510 VSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDL 650 VS+L+IEDGIFEVKST GDTHLGGEDFDN MV+ FV++FK+KYKKD+ Sbjct: 300 VSVLSIEDGIFEVKSTHGDTHLGGEDFDNNMVDFFVKQFKQKYKKDI 346 Score = 74.1 bits (174), Expect = 9e-14 Identities = 37/54 (68%), Positives = 40/54 (74%) Frame = +1 Query: 217 G*RQNLFPRGSQFMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 378 G + F MVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG Sbjct: 134 GETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAG 187 >SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) Length = 1327 Score = 146 bits (353), Expect = 2e-35 Identities = 69/84 (82%), Positives = 78/84 (92%) Frame = +1 Query: 256 MVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAI 435 MVLTKMKETAEAYLGK V +AV+TVPAYFND+QRQATKDAG I+GL V+RIINEPTAAAI Sbjct: 820 MVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAI 879 Query: 436 AYGLDKKGTGERNVLIFDLGGGTF 507 AYG+DKK GE+N+L+FDLGGGTF Sbjct: 880 AYGMDKK-EGEKNILVFDLGGGTF 902 Score = 109 bits (263), Expect = 1e-24 Identities = 53/90 (58%), Positives = 66/90 (73%), Gaps = 1/90 (1%) Frame = +2 Query: 5 TPSYVAFTDT-ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS 181 TPSYVAFT+ ERLIGD AKNQ+ NP NT+FDAKRLIGR ++D +VQ D+K +PF+VV Sbjct: 735 TPSYVAFTEEGERLIGDGAKNQLTTNPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVD 794 Query: 182 DGGKPKIKVAYKGEDKTFFPEEVSSWCLRK 271 KP ++V K E KTF EE+S+ L K Sbjct: 795 KNKKPHVQVKVKDEIKTFAAEEISAMVLTK 824 Score = 65.3 bits (152), Expect = 4e-11 Identities = 26/47 (55%), Positives = 39/47 (82%) Frame = +3 Query: 510 VSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDL 650 VS+LTI++G+FEV +T GDTHLGGEDFD ++ HF++ +K+K K++ Sbjct: 904 VSLLTIDNGVFEVVATNGDTHLGGEDFDQNVMEHFIKLYKKKKGKNI 950 >SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) Length = 179 Score = 89.4 bits (212), Expect = 2e-18 Identities = 57/112 (50%), Positives = 70/112 (62%), Gaps = 26/112 (23%) Frame = +1 Query: 217 G*RQNLFPRGSQFMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN 396 G +++ P +VL ++K AEA+LG+ V+ AVITVPA+FND+QRQATKDAGTI+GL+ Sbjct: 8 GEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAGTIAGLD 67 Query: 397 ------------------------VLRIINEPTAAAIAYGLDKK--GTGERN 474 VLRIINEPTAAAIAYGLDK G ERN Sbjct: 68 VLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKARGGKAERN 119 >SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) Length = 437 Score = 89.0 bits (211), Expect = 3e-18 Identities = 45/82 (54%), Positives = 59/82 (71%) Frame = +1 Query: 259 VLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIA 438 V+ K++ AE L TV AV++VPA F+ QR AT A +++G+ VLR+INEPTAAA+A Sbjct: 153 VIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVINEPTAAALA 212 Query: 439 YGLDKKGTGERNVLIFDLGGGT 504 YGL KK G NV++ DLGGGT Sbjct: 213 YGLHKK-EGVANVMVVDLGGGT 233 Score = 66.1 bits (154), Expect = 2e-11 Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 1/93 (1%) Frame = +2 Query: 8 PSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD- 184 PS VAFTD L+G+ A +Q +NP NTI+DAKR IG+ F + K + F V +D Sbjct: 68 PSLVAFTDKGVLVGEKALSQAEINPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDK 127 Query: 185 GGKPKIKVAYKGEDKTFFPEEVSSWCLRK*RKL 283 G V KG PEE+ + ++K R + Sbjct: 128 RGNAGFLVGKKGNFTVITPEEIGGYVIKKLRTM 160 Score = 41.9 bits (94), Expect = 4e-04 Identities = 17/49 (34%), Positives = 31/49 (63%) Frame = +3 Query: 504 LRVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDL 650 L VS+L I+ G+F + AG+ LGG+DF+ R + + +Q +++ + L Sbjct: 234 LDVSLLNIQGGMFVTMAMAGNNRLGGQDFNARFMQYLLQLIHKRFNRQL 282 >SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1068 Score = 72.1 bits (169), Expect = 4e-13 Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 4/95 (4%) Frame = +1 Query: 223 RQNLF-PRGSQFMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNV 399 +Q +F P M+ T++K TAE L V + VI+VP+Y+ D QR+ DA +GLN Sbjct: 167 KQEVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNC 226 Query: 400 LRIINEPTAAAIAYGLDKKG---TGERNVLIFDLG 495 LR++N+ TA ++AYG+ K+ RNV+ D+G Sbjct: 227 LRLMNDTTAVSLAYGIYKQDLPTDKPRNVVFVDIG 261 Score = 50.4 bits (115), Expect = 1e-06 Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 1/59 (1%) Frame = +2 Query: 77 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 250 N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQV 176 Score = 50.4 bits (115), Expect = 1e-06 Identities = 25/49 (51%), Positives = 31/49 (63%) Frame = +3 Query: 504 LRVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDL 650 L+V I G +V STA + +LGG DFD +V HF QEFK KYK D+ Sbjct: 265 LQVCITAFLKGQLKVLSTAVEPNLGGRDFDYVLVEHFAQEFKTKYKIDV 313 Score = 29.9 bits (64), Expect = 1.9 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = +2 Query: 5 TPSYVAFTDTERLIGDAAKNQ 67 TPS+V+ D +RLIG + KNQ Sbjct: 35 TPSFVSLGDKQRLIGTSGKNQ 55 >SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 766 Score = 61.7 bits (143), Expect = 5e-10 Identities = 26/48 (54%), Positives = 37/48 (77%) Frame = +3 Query: 510 VSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 653 +SIL I+ G+FEVK+T GDT+LGGEDFDN ++ + EFK++ DL+ Sbjct: 14 ISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLIAEFKKESGVDLS 61 >SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1019 Score = 58.8 bits (136), Expect = 4e-09 Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 4/87 (4%) Frame = +1 Query: 256 MVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAI 435 M+L + E + +++ V+TVP +FN ++R+A A + GLNVL+I+N TA A+ Sbjct: 88 MILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLRAAELVGLNVLQIMNSNTAVAL 147 Query: 436 AYGLDKK----GTGERNVLIFDLGGGT 504 YGL ++ T E++ + +D+G + Sbjct: 148 NYGLFQQKSFNDTLEKHFMFYDMGASS 174 Score = 31.9 bits (69), Expect = 0.47 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +3 Query: 546 VKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYK 641 +K D LGG D R+ +H VQ FK+ YK Sbjct: 201 IKGIGFDRTLGGHAIDMRLRDHLVQLFKKNYK 232 >SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) Length = 592 Score = 34.7 bits (76), Expect = 0.067 Identities = 14/42 (33%), Positives = 29/42 (69%) Frame = +3 Query: 510 VSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK 635 V++L++ +G+++V +T D LGG +FD +++ +FKR+ Sbjct: 168 VTLLSVINGMYKVLATEYDGALGGRNFDEVLLDLLANDFKRQ 209 >SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) Length = 1080 Score = 29.9 bits (64), Expect = 1.9 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 10/82 (12%) Frame = +1 Query: 250 QFMVLTKMKETAEAYLGKT----------VQNAVITVPAYFNDSQRQATKDAGTISGLNV 399 Q V K T+E Y+G T + NA +T+P YF + +K G G+ + Sbjct: 991 QATVTRKDNNTSETYVGLTENSFKTRRNKIYNAPLTLPPYFWCHPSRKSKKDGAKEGMAM 1050 Query: 400 LRIINEPTAAAIAYGLDKKGTG 465 +++ I+Y LD+K TG Sbjct: 1051 --AMSKERNQEISYKLDRKWTG 1070 >SB_41989| Best HMM Match : RVT_1 (HMM E-Value=1.2e-33) Length = 585 Score = 29.5 bits (63), Expect = 2.5 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = -3 Query: 605 HHAIVKVLTSQVGVAGGGFHLEDTILDGKDGHAKVPPPRSKI 480 HH IV L + GG H T+ D K K+PP S + Sbjct: 36 HHLIVARLKLKKNWTGGSSHNTITLKDSKKKEEKIPPADSDL 77 >SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) Length = 420 Score = 29.1 bits (62), Expect = 3.3 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = -3 Query: 98 RILCCWGSSPPGSWRH 51 R++CC G SP WRH Sbjct: 395 RVVCCQGDSPSPRWRH 410 >SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) Length = 340 Score = 29.1 bits (62), Expect = 3.3 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = -3 Query: 98 RILCCWGSSPPGSWRH 51 R++CC G SP WRH Sbjct: 170 RVVCCQGDSPSPRWRH 185 >SB_43194| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 89 Score = 27.9 bits (59), Expect = 7.6 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = +3 Query: 498 RYLRVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 653 R+ + +IL+ D VK D+H FD+ +VN FV KK L+ Sbjct: 33 RHTKYTILSESDDTI-VKPKPADSHRNQSAFDDELVNKFVNCMMWDGKKSLS 83 >SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05) Length = 1264 Score = 27.9 bits (59), Expect = 7.6 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Frame = +1 Query: 25 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASRHEALA 165 H R +R+ + GG +EP + R T T C+CA R+ + A Sbjct: 421 HGERHGYRKLSRVCGGRRPNEPYERTARVHTILSTDTETCFCAKRYGSAA 470 >SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2) Length = 451 Score = 27.9 bits (59), Expect = 7.6 Identities = 14/49 (28%), Positives = 22/49 (44%) Frame = -2 Query: 162 QCFMSACTVASSNLRPMRRLASNIVLLGFIATWFLAASPMRRSVSVNAT 16 QCF+S C + S + + R+ L TW + + M S +AT Sbjct: 169 QCFLSVCDLCCSLMTQIPRMRHTWDFLEHAPTWISSQTSMSFSAITDAT 217 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,621,301 Number of Sequences: 59808 Number of extensions: 504087 Number of successful extensions: 1446 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 1327 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1442 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1669334250 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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