Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20732
         (692 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M80537-1|AAA28530.1| 5147|Drosophila melanogaster fat protein pr...    69   6e-12
AE014134-710|AAF51036.1| 5147|Drosophila melanogaster CG3352-PA ...    69   6e-12

>M80537-1|AAA28530.1| 5147|Drosophila melanogaster fat protein
            protein.
          Length = 5147

 Score = 68.9 bits (161), Expect = 6e-12
 Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = +2

Query: 2    TPRSVHVVVYAFNNKVP-NGKIADVKPNDPDIIGDYKCKIIRDSTSDRTLSLLNIRSGCD 178
            T RS+H+ V  FN  +P N K+ADV+PND DI+GDY+C++ ++    +    L I   CD
Sbjct: 3756 TTRSLHIAVSLFNGDLPSNVKLADVRPNDIDIVGDYRCRLQKNPAQSQL--QLAIPRACD 3813

Query: 179  LYTNTIKPGQGYSFSVLGNDGIHKD 253
            L T +        FS  GNDG H D
Sbjct: 3814 LITTSHTTPIASVFSYTGNDGKHGD 3838



 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 26/61 (42%), Positives = 41/61 (67%)
 Frame = +1

Query: 259  SSVSVEYFSFDNTTVEESVTIRVMNMTATFFLTHFYRSLLEILNAKLDKNKETIFLYGVN 438
            S VSV + SF+N T+  SV+I V NMTA  FL + YR +LE++ +++  N++ + LY + 
Sbjct: 3841 SKVSVAFQSFNNETLANSVSIMVRNMTANHFLANHYRPILEMIKSRM-SNEDEVILYSLL 3899

Query: 439  E 441
            E
Sbjct: 3900 E 3900


>AE014134-710|AAF51036.1| 5147|Drosophila melanogaster CG3352-PA
            protein.
          Length = 5147

 Score = 68.9 bits (161), Expect = 6e-12
 Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = +2

Query: 2    TPRSVHVVVYAFNNKVP-NGKIADVKPNDPDIIGDYKCKIIRDSTSDRTLSLLNIRSGCD 178
            T RS+H+ V  FN  +P N K+ADV+PND DI+GDY+C++ ++    +    L I   CD
Sbjct: 3756 TTRSLHIAVSLFNGDLPSNVKLADVRPNDIDIVGDYRCRLQKNPAQSQL--QLAIPRACD 3813

Query: 179  LYTNTIKPGQGYSFSVLGNDGIHKD 253
            L T +        FS  GNDG H D
Sbjct: 3814 LITTSHTTPIASVFSYTGNDGKHGD 3838



 Score = 53.2 bits (122), Expect = 3e-07
 Identities = 26/61 (42%), Positives = 41/61 (67%)
 Frame = +1

Query: 259  SSVSVEYFSFDNTTVEESVTIRVMNMTATFFLTHFYRSLLEILNAKLDKNKETIFLYGVN 438
            S VSV + SF+N T+  SV+I V NMTA  FL + YR +LE++ +++  N++ + LY + 
Sbjct: 3841 SKVSVAFQSFNNETLANSVSIMVRNMTAYHFLANHYRPILEMIKSRM-SNEDEVILYSLL 3899

Query: 439  E 441
            E
Sbjct: 3900 E 3900


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,765,023
Number of Sequences: 53049
Number of extensions: 547534
Number of successful extensions: 1198
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)