Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20731
         (713 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I1Y3 Cluster: Putative uncharacterized protein PFD022...    34   4.0  
UniRef50_Q97A10 Cluster: TVG1021365 protein; n=2; Thermoplasma|R...    34   4.0  
UniRef50_Q8I434 Cluster: Putative uncharacterized protein PFE033...    33   7.0  

>UniRef50_Q8I1Y3 Cluster: Putative uncharacterized protein PFD0225w;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PFD0225w - Plasmodium falciparum
            (isolate 3D7)
          Length = 4138

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +2

Query: 206  FLLCSKSEEDSGNLRTFAIISCFINLLEAILDRYAKIR 319
            F+   K+EE++ N+ +  II  FIN+    + +Y+KIR
Sbjct: 1135 FIYPMKNEEENKNITSLGIILSFINIFNETISQYSKIR 1172


>UniRef50_Q97A10 Cluster: TVG1021365 protein; n=2; Thermoplasma|Rep:
           TVG1021365 protein - Thermoplasma volcanium
          Length = 385

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -3

Query: 324 VFLILAYRSRIASSRFIKHDIIANVRKFPESSSLLLHKRNF 202
           VF++L  R  +      ++ +IA V+ FPES  ++ H+R F
Sbjct: 76  VFIVLRQRFYVGDECINRYGLIAKVKVFPESGDVIPHERTF 116


>UniRef50_Q8I434 Cluster: Putative uncharacterized protein PFE0335w;
           n=3; Plasmodium|Rep: Putative uncharacterized protein
           PFE0335w - Plasmodium falciparum (isolate 3D7)
          Length = 929

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
 Frame = +1

Query: 352 HFVENFNAATPFSR----NKKEYEIV-KVTALF*SNKFFDCRGRTRVVTRPVCDSFTYRN 516
           +  ++  AA PFS     N++EYEIV K+ + F        +    +    VC SF +  
Sbjct: 752 YLFQDILAAPPFSNTQQLNREEYEIVQKIVSCFLEKNNIYYKSEKVITWLHVCSSFIHEM 811

Query: 517 RSSNHILISIPGARPTYCQLI 579
                +   I   R  YCQ I
Sbjct: 812 YKDKKVSQEIDEVRKEYCQKI 832


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,249,234
Number of Sequences: 1657284
Number of extensions: 12075676
Number of successful extensions: 24195
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24194
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)