Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20731
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.3  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   7.5  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   9.9  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   9.9  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +2

Query: 143 PIGARKHEI*TGISLKQLT*KFLLCSKSE-EDSGNLRTFAIIS 268
           P+G   H+I   +S+ QLT +   C +++  D+    T +IIS
Sbjct: 749 PVGTNPHDINNPLSVNQLTGQ---CVRNDSSDTNGKETRSIIS 788


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +2

Query: 143 PIGARKHEI*TGISLKQLT*KFLLCSKSE-EDSGNLRTFAIIS 268
           P+G   H+I   +S+ QLT +   C +++  D+    T +IIS
Sbjct: 641 PVGTNPHDINNPLSVNQLTGQ---CVRNDSSDTNGKETRSIIS 680


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = +1

Query: 379 TPFSRNKKEYEIVKVTALF*SNKFFDCRGRTRVVTRPVCD 498
           +PF  + +  E++K  +       +D RGR   +   V D
Sbjct: 131 SPFRIDNESQELLKYPSFARGRSLYDSRGRHSEIVETVYD 170


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 227 HFYCTKEIFTSAVLKIYLFIF 165
           HF+C   IFT  +L    FIF
Sbjct: 168 HFFCAFIIFTMHLLFCCAFIF 188


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +1

Query: 61  TNSHSLWTEKFIPYYY 108
           T+SH+ + + + P YY
Sbjct: 295 TSSHNYYAQNYAPTYY 310


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +1

Query: 487 PVCDSFTYRNRSSNHILISIPGARPTYCQLIRYSVLTRSAL 609
           PVCD    ++ S    + +  G RP  C+L + +    S L
Sbjct: 53  PVCDRRFSQSSSVTTHMRTHSGERPYRCRLCKKAFSDSSTL 93


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +1

Query: 487 PVCDSFTYRNRSSNHILISIPGARPTYCQLIRYSVLTRSAL 609
           PVCD    ++ S    + +  G RP  C+L + +    S L
Sbjct: 309 PVCDRRFSQSSSVTTHMRTHSGERPYRCRLCKKAFSDSSTL 349


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,543
Number of Sequences: 336
Number of extensions: 3073
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)