Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20730
(478 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 160 4e-40
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 160 5e-40
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 160 5e-40
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 160 5e-40
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 157 5e-39
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 157 5e-39
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 105 1e-23
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 105 1e-23
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 94 4e-20
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 87 5e-18
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 86 1e-17
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 86 1e-17
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 86 1e-17
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 86 1e-17
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 84 4e-17
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 84 4e-17
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 83 1e-16
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 82 2e-16
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 82 2e-16
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 82 2e-16
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 82 2e-16
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 81 4e-16
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 77 7e-15
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 77 7e-15
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 61 3e-10
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 61 3e-10
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 27 7.0
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 160 bits (389), Expect = 4e-40
Identities = 70/75 (93%), Positives = 74/75 (98%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEPGTM+SVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKE+E C
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEGC 127
Query: 433 DCLQGFQLTHSLGGG 477
DCLQGFQLTHSLGGG
Sbjct: 128 DCLQGFQLTHSLGGG 142
Score = 136 bits (328), Expect = 1e-32
Identities = 59/70 (84%), Positives = 64/70 (91%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 233 PRAILVDWSP 262
PRA+LVD P
Sbjct: 61 PRAVLVDLEP 70
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 160 bits (388), Expect = 5e-40
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEPGTM+SVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+RKE+E C
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGC 127
Query: 433 DCLQGFQLTHSLGGG 477
DCLQGFQLTHSLGGG
Sbjct: 128 DCLQGFQLTHSLGGG 142
Score = 128 bits (310), Expect = 2e-30
Identities = 55/70 (78%), Positives = 63/70 (90%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 233 PRAILVDWSP 262
PRA+LVD P
Sbjct: 61 PRAVLVDLEP 70
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 160 bits (388), Expect = 5e-40
Identities = 69/75 (92%), Positives = 75/75 (100%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEPGTM+SVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKE+ESC
Sbjct: 68 LEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESC 127
Query: 433 DCLQGFQLTHSLGGG 477
DCLQGFQ+THSLGGG
Sbjct: 128 DCLQGFQMTHSLGGG 142
Score = 144 bits (350), Expect = 2e-35
Identities = 64/70 (91%), Positives = 67/70 (95%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREIVH+QAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 233 PRAILVDWSP 262
PRA LVD P
Sbjct: 61 PRACLVDLEP 70
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 160 bits (388), Expect = 5e-40
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEPGTM+SVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+RKE+E C
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGC 127
Query: 433 DCLQGFQLTHSLGGG 477
DCLQGFQLTHSLGGG
Sbjct: 128 DCLQGFQLTHSLGGG 142
Score = 127 bits (307), Expect = 4e-30
Identities = 54/70 (77%), Positives = 63/70 (90%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 233 PRAILVDWSP 262
PRA+LVD P
Sbjct: 61 PRAVLVDLEP 70
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 157 bits (380), Expect = 5e-39
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEPGTM+SVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKE+ES
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEST 127
Query: 433 DCLQGFQLTHSLGGG 477
DCLQGFQLTHSLGGG
Sbjct: 128 DCLQGFQLTHSLGGG 142
Score = 133 bits (322), Expect = 5e-32
Identities = 58/70 (82%), Positives = 63/70 (90%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREIVH+QAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 233 PRAILVDWSP 262
PRA+LVD P
Sbjct: 61 PRAVLVDLEP 70
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 157 bits (380), Expect = 5e-39
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEPGTM+SVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKE+ES
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEST 127
Query: 433 DCLQGFQLTHSLGGG 477
DCLQGFQLTHSLGGG
Sbjct: 128 DCLQGFQLTHSLGGG 142
Score = 133 bits (322), Expect = 5e-32
Identities = 58/70 (82%), Positives = 63/70 (90%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREIVH+QAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 233 PRAILVDWSP 262
PRA+LVD P
Sbjct: 61 PRAVLVDLEP 70
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 105 bits (253), Expect = 1e-23
Identities = 47/74 (63%), Positives = 54/74 (72%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 233 PRAILVDWSPAPWN 274
PRAILVD P N
Sbjct: 61 PRAILVDLDPESIN 74
Score = 103 bits (248), Expect = 5e-23
Identities = 43/75 (57%), Positives = 61/75 (81%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
L+P ++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+R+E+E+
Sbjct: 68 LDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAA 127
Query: 433 DCLQGFQLTHSLGGG 477
D L+GFQL HSLGGG
Sbjct: 128 DSLEGFQLIHSLGGG 142
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 105 bits (253), Expect = 1e-23
Identities = 47/74 (63%), Positives = 54/74 (72%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 233 PRAILVDWSPAPWN 274
PRAILVD P N
Sbjct: 61 PRAILVDLDPESIN 74
Score = 103 bits (248), Expect = 5e-23
Identities = 43/75 (57%), Positives = 61/75 (81%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
L+P ++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+R+E+E+
Sbjct: 68 LDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAA 127
Query: 433 DCLQGFQLTHSLGGG 477
D L+GFQL HSLGGG
Sbjct: 128 DSLEGFQLIHSLGGG 142
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 94.3 bits (224), Expect = 4e-20
Identities = 38/75 (50%), Positives = 55/75 (73%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP ++ +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD +RK++E+C
Sbjct: 73 LEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRKQTENC 132
Query: 433 DCLQGFQLTHSLGGG 477
+ LQGF + HS GGG
Sbjct: 133 EGLQGFLVFHSFGGG 147
Score = 57.6 bits (133), Expect = 4e-09
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +2
Query: 56 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTG-AYHGDSDLQLERINVYYNEASGGKYV 232
RE V + GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 233 PRAILVDWSP 262
PRAI VD P
Sbjct: 66 PRAIYVDLEP 75
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 87.4 bits (207), Expect = 5e-18
Identities = 36/75 (48%), Positives = 52/75 (69%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP ++ VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D VR+ +E C
Sbjct: 70 LEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRRLTERC 129
Query: 433 DCLQGFQLTHSLGGG 477
LQGF + HS GGG
Sbjct: 130 QSLQGFLIFHSFGGG 144
Score = 65.3 bits (152), Expect = 2e-11
Identities = 33/72 (45%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 226
MREIV + GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 227 YVPRAILVDWSP 262
+VPRAI VD P
Sbjct: 61 HVPRAIFVDLEP 72
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 86.2 bits (204), Expect = 1e-17
Identities = 34/75 (45%), Positives = 54/75 (72%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP ++ +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +R+ +++C
Sbjct: 68 LEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNC 127
Query: 433 DCLQGFQLTHSLGGG 477
LQGF + HS GGG
Sbjct: 128 SGLQGFFVFHSFGGG 142
Score = 64.5 bits (150), Expect = 4e-11
Identities = 28/70 (40%), Positives = 39/70 (55%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MRE++ + GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 233 PRAILVDWSP 262
PR+I VD P
Sbjct: 61 PRSIFVDLEP 70
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 86.2 bits (204), Expect = 1e-17
Identities = 34/75 (45%), Positives = 54/75 (72%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP ++ +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +R+ +++C
Sbjct: 68 LEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNC 127
Query: 433 DCLQGFQLTHSLGGG 477
LQGF + HS GGG
Sbjct: 128 SGLQGFFVFHSFGGG 142
Score = 66.5 bits (155), Expect = 9e-12
Identities = 28/70 (40%), Positives = 38/70 (54%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MRE++ + GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 233 PRAILVDWSP 262
PR+I VD P
Sbjct: 61 PRSIFVDLEP 70
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 86.2 bits (204), Expect = 1e-17
Identities = 34/75 (45%), Positives = 54/75 (72%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP ++ +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +R+ +++C
Sbjct: 68 LEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNC 127
Query: 433 DCLQGFQLTHSLGGG 477
LQGF + HS GGG
Sbjct: 128 SGLQGFFVFHSFGGG 142
Score = 66.5 bits (155), Expect = 9e-12
Identities = 28/70 (40%), Positives = 38/70 (54%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MRE++ + GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 233 PRAILVDWSP 262
PR+I VD P
Sbjct: 61 PRSIFVDLEP 70
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 86.2 bits (204), Expect = 1e-17
Identities = 34/75 (45%), Positives = 54/75 (72%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP ++ +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +R+ +++C
Sbjct: 68 LEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNC 127
Query: 433 DCLQGFQLTHSLGGG 477
LQGF + HS GGG
Sbjct: 128 SGLQGFFVFHSFGGG 142
Score = 64.5 bits (150), Expect = 4e-11
Identities = 28/70 (40%), Positives = 39/70 (55%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MRE++ + GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 233 PRAILVDWSP 262
PR+I VD P
Sbjct: 61 PRSIFVDLEP 70
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 84.2 bits (199), Expect = 4e-17
Identities = 33/75 (44%), Positives = 53/75 (70%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP ++ +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +R+ +++C
Sbjct: 68 LEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNC 127
Query: 433 DCLQGFQLTHSLGGG 477
LQGF + HS GGG
Sbjct: 128 SGLQGFFVFHSFGGG 142
Score = 62.1 bits (144), Expect = 2e-10
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MRE++ + GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 233 PRAILVDWSP 262
PR+I VD P
Sbjct: 61 PRSIFVDLEP 70
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 84.2 bits (199), Expect = 4e-17
Identities = 33/75 (44%), Positives = 53/75 (70%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP ++ +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +R+ +++C
Sbjct: 68 LEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNC 127
Query: 433 DCLQGFQLTHSLGGG 477
LQGF + HS GGG
Sbjct: 128 SGLQGFFVFHSFGGG 142
Score = 62.1 bits (144), Expect = 2e-10
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MRE++ + GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 233 PRAILVDWSP 262
PR+I VD P
Sbjct: 61 PRSIFVDLEP 70
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 83.0 bits (196), Expect = 1e-16
Identities = 32/75 (42%), Positives = 53/75 (70%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP ++ +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD +R+ + +C
Sbjct: 67 LEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRRLANNC 126
Query: 433 DCLQGFQLTHSLGGG 477
+ LQGF + HS GGG
Sbjct: 127 EGLQGFFVFHSFGGG 141
Score = 54.8 bits (126), Expect = 3e-08
Identities = 26/70 (37%), Positives = 39/70 (55%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MRE++ + GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGRHV 59
Query: 233 PRAILVDWSP 262
PR+I VD P
Sbjct: 60 PRSIFVDLEP 69
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 81.8 bits (193), Expect = 2e-16
Identities = 32/75 (42%), Positives = 51/75 (68%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP ++ +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R+ +++C
Sbjct: 70 LEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNC 129
Query: 433 DCLQGFQLTHSLGGG 477
LQGF + HS GGG
Sbjct: 130 TGLQGFLVFHSFGGG 144
Score = 62.5 bits (145), Expect = 2e-10
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 227 YVPRAILVDWSP 262
+VPRA++VD P
Sbjct: 61 HVPRAVMVDLEP 72
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 81.8 bits (193), Expect = 2e-16
Identities = 32/75 (42%), Positives = 51/75 (68%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP ++ +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R+ +++C
Sbjct: 69 LEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNC 128
Query: 433 DCLQGFQLTHSLGGG 477
LQGF + HS GGG
Sbjct: 129 TGLQGFLVFHSFGGG 143
Score = 60.5 bits (140), Expect = 6e-10
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +2
Query: 56 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 229
RE++ + GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 230 VPRAILVDWSP 262
VPRA++VD P
Sbjct: 61 VPRAVMVDLEP 71
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 81.8 bits (193), Expect = 2e-16
Identities = 32/75 (42%), Positives = 51/75 (68%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP ++ +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R+ +++C
Sbjct: 70 LEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNC 129
Query: 433 DCLQGFQLTHSLGGG 477
LQGF + HS GGG
Sbjct: 130 TGLQGFLVFHSFGGG 144
Score = 62.5 bits (145), Expect = 2e-10
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 227 YVPRAILVDWSP 262
+VPRA++VD P
Sbjct: 61 HVPRAVMVDLEP 72
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 81.8 bits (193), Expect = 2e-16
Identities = 32/75 (42%), Positives = 51/75 (68%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP ++ +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R+ +++C
Sbjct: 70 LEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNC 129
Query: 433 DCLQGFQLTHSLGGG 477
LQGF + HS GGG
Sbjct: 130 TGLQGFLVFHSFGGG 144
Score = 62.5 bits (145), Expect = 2e-10
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 227 YVPRAILVDWSP 262
+VPRA++VD P
Sbjct: 61 HVPRAVMVDLEP 72
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 81.0 bits (191), Expect = 4e-16
Identities = 34/75 (45%), Positives = 51/75 (68%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP ++ +R+G + +F P+ + G+ A NN+A+GHYT G E++D V+D VR+ E+C
Sbjct: 75 LEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRRLVENC 134
Query: 433 DCLQGFQLTHSLGGG 477
LQGF + HS GGG
Sbjct: 135 RGLQGFLVFHSFGGG 149
Score = 66.1 bits (154), Expect = 1e-11
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = +2
Query: 50 KMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGG 223
+ RE++ + GQ G Q+G WE+ EHGI P G + + L + + N +++E G
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 224 KYVPRAILVDWSPAP 268
K+VPRAI+VD P P
Sbjct: 65 KHVPRAIMVDLEPTP 79
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 77.0 bits (181), Expect = 7e-15
Identities = 32/75 (42%), Positives = 51/75 (68%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP ++ VR+G + +F P+ + G+ A N +A+G YT G E++D V+D V++ +E+C
Sbjct: 76 LEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENC 135
Query: 433 DCLQGFQLTHSLGGG 477
+ LQGF + HS GGG
Sbjct: 136 NGLQGFVIFHSFGGG 150
Score = 68.1 bits (159), Expect = 3e-12
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Frame = +2
Query: 56 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGK 226
RE++ + GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 227 YVPRAILVDWSP 262
+VPR + VD P
Sbjct: 67 HVPRCLFVDLEP 78
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 77.0 bits (181), Expect = 7e-15
Identities = 32/75 (42%), Positives = 51/75 (68%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP ++ VR+G + +F P+ + G+ A N +A+G YT G E++D V+D V++ +E+C
Sbjct: 48 LEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENC 107
Query: 433 DCLQGFQLTHSLGGG 477
+ LQGF + HS GGG
Sbjct: 108 NGLQGFVIFHSFGGG 122
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +2
Query: 131 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVDWSP 262
EHGI P G YH + D + E IN ++ E +GGK+VPR + VD P
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEP 50
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 61.3 bits (142), Expect = 3e-10
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Frame = +1
Query: 253 LEPGTMESVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKES 423
LEP + + P F +F DN GAGNNWA G Y +G E+ + ++D++ +E+
Sbjct: 70 LEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREA 128
Query: 424 ESCDCLQGFQLTHSLGGG 477
E+ + L G THS+ GG
Sbjct: 129 ENTNNLDGILFTHSVSGG 146
Score = 58.8 bits (136), Expect = 2e-09
Identities = 26/67 (38%), Positives = 41/67 (61%)
Frame = +2
Query: 62 IVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 241
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 242 ILVDWSP 262
+LVD P
Sbjct: 66 VLVDLEP 72
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 61.3 bits (142), Expect = 3e-10
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Frame = +1
Query: 253 LEPGTMESVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKES 423
LEP + + P F +F DN GAGNNWA G Y +G E+ + ++D++ +E+
Sbjct: 70 LEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREA 128
Query: 424 ESCDCLQGFQLTHSLGGG 477
E+ + L G THS+ GG
Sbjct: 129 ENTNNLDGILFTHSVSGG 146
Score = 58.8 bits (136), Expect = 2e-09
Identities = 26/67 (38%), Positives = 41/67 (61%)
Frame = +2
Query: 62 IVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 241
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 242 ILVDWSP 262
+LVD P
Sbjct: 66 VLVDLEP 72
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 119 IISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVD 253
I S+ H I T + H DS R + GG + R IL+D
Sbjct: 101 IASEHHHISTTSSCHSDSGNSSSRDVITPFTVHGGASIGRLILID 145
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,659,487
Number of Sequences: 27780
Number of extensions: 206726
Number of successful extensions: 630
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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