Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20730
(478 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 157 3e-39
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 157 3e-39
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 157 3e-39
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 157 4e-39
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 156 8e-39
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 155 1e-38
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 154 3e-38
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 154 3e-38
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 153 4e-38
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 82 2e-16
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 82 2e-16
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 81 3e-16
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 81 3e-16
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 81 3e-16
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 81 3e-16
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 81 5e-16
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 67 5e-12
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 67 5e-12
At4g37190.1 68417.m05265 expressed protein 30 0.93
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 30 0.93
At2g44070.1 68415.m05481 eukaryotic translation initiation facto... 29 2.2
At2g28400.1 68415.m03451 expressed protein contains Pfam profile... 29 2.2
At3g48270.1 68416.m05268 cytochrome P450 71A26, putative (CYP71A... 28 3.8
At2g24200.1 68415.m02891 cytosol aminopeptidase identical to cyt... 28 3.8
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 5.0
At1g20500.1 68414.m02554 4-coumarate--CoA ligase family / 4-coum... 27 5.0
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 27 6.6
At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,... 27 6.6
At5g55690.1 68418.m06943 MADS-box protein (AGL47) 27 8.7
At1g27595.1 68414.m03365 expressed protein similar to Symplekin ... 27 8.7
At1g20400.1 68414.m02544 myosin heavy chain-related 27 8.7
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 157 bits (382), Expect = 3e-39
Identities = 68/75 (90%), Positives = 74/75 (98%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEPGTM+SVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+C
Sbjct: 68 LEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 433 DCLQGFQLTHSLGGG 477
DCLQGFQ+ HSLGGG
Sbjct: 128 DCLQGFQVCHSLGGG 142
Score = 121 bits (292), Expect = 2e-28
Identities = 50/70 (71%), Positives = 61/70 (87%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREI+H+Q GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 233 PRAILVDWSP 262
PRA+L+D P
Sbjct: 61 PRAVLMDLEP 70
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 157 bits (382), Expect = 3e-39
Identities = 68/75 (90%), Positives = 74/75 (98%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEPGTM+S+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+C
Sbjct: 68 LEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 433 DCLQGFQLTHSLGGG 477
DCLQGFQ+ HSLGGG
Sbjct: 128 DCLQGFQVCHSLGGG 142
Score = 124 bits (299), Expect = 3e-29
Identities = 54/70 (77%), Positives = 61/70 (87%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREI+H+Q GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 233 PRAILVDWSP 262
PRA+L+D P
Sbjct: 61 PRAVLMDLEP 70
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 157 bits (382), Expect = 3e-39
Identities = 68/75 (90%), Positives = 74/75 (98%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEPGTM+SVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+C
Sbjct: 68 LEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 433 DCLQGFQLTHSLGGG 477
DCLQGFQ+ HSLGGG
Sbjct: 128 DCLQGFQVCHSLGGG 142
Score = 122 bits (293), Expect = 2e-28
Identities = 51/70 (72%), Positives = 62/70 (88%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREI+H+Q GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 233 PRAILVDWSP 262
PRA+L+D P
Sbjct: 61 PRAVLMDLEP 70
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 157 bits (381), Expect = 4e-39
Identities = 67/75 (89%), Positives = 74/75 (98%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEPGTM+S+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+C
Sbjct: 69 LEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 128
Query: 433 DCLQGFQLTHSLGGG 477
DCLQGFQ+ HSLGGG
Sbjct: 129 DCLQGFQVCHSLGGG 143
Score = 126 bits (304), Expect = 8e-30
Identities = 55/71 (77%), Positives = 63/71 (88%), Gaps = 1/71 (1%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGD-SDLQLERINVYYNEASGGKY 229
MREI+H+Q GQCGNQIG+KFWE+I DEHGID TG Y GD +DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 230 VPRAILVDWSP 262
VPRA+L+D P
Sbjct: 61 VPRAVLMDLEP 71
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 156 bits (378), Expect = 8e-39
Identities = 66/75 (88%), Positives = 74/75 (98%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEPGTM+S+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+C
Sbjct: 69 LEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 128
Query: 433 DCLQGFQLTHSLGGG 477
DCLQGFQ+ HSLGGG
Sbjct: 129 DCLQGFQVCHSLGGG 143
Score = 130 bits (315), Expect = 4e-31
Identities = 56/71 (78%), Positives = 65/71 (91%), Gaps = 1/71 (1%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 229
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 230 VPRAILVDWSP 262
VPRA+L+D P
Sbjct: 61 VPRAVLMDLEP 71
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 155 bits (376), Expect = 1e-38
Identities = 66/75 (88%), Positives = 74/75 (98%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEPGTM+SVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+C
Sbjct: 68 LEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 127
Query: 433 DCLQGFQLTHSLGGG 477
DCLQGFQ+ HSLGGG
Sbjct: 128 DCLQGFQVCHSLGGG 142
Score = 128 bits (309), Expect = 2e-30
Identities = 54/70 (77%), Positives = 63/70 (90%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREI+H+Q GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 233 PRAILVDWSP 262
PRAIL+D P
Sbjct: 61 PRAILMDLEP 70
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 154 bits (374), Expect = 3e-38
Identities = 66/75 (88%), Positives = 73/75 (97%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEPGTM+S+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+C
Sbjct: 68 LEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 433 DCLQGFQLTHSLGGG 477
DCLQGFQ+ HSLGGG
Sbjct: 128 DCLQGFQVCHSLGGG 142
Score = 127 bits (306), Expect = 4e-30
Identities = 54/70 (77%), Positives = 62/70 (88%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 233 PRAILVDWSP 262
PRA+L+D P
Sbjct: 61 PRAVLMDLEP 70
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 154 bits (374), Expect = 3e-38
Identities = 66/75 (88%), Positives = 73/75 (97%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEPGTM+S+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+C
Sbjct: 68 LEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 433 DCLQGFQLTHSLGGG 477
DCLQGFQ+ HSLGGG
Sbjct: 128 DCLQGFQVCHSLGGG 142
Score = 127 bits (306), Expect = 4e-30
Identities = 54/70 (77%), Positives = 62/70 (88%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 233 PRAILVDWSP 262
PRA+L+D P
Sbjct: 61 PRAVLMDLEP 70
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 153 bits (372), Expect = 4e-38
Identities = 67/75 (89%), Positives = 73/75 (97%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEPGTM+S+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 68 LEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENS 127
Query: 433 DCLQGFQLTHSLGGG 477
DCLQGFQ+ HSLGGG
Sbjct: 128 DCLQGFQVCHSLGGG 142
Score = 126 bits (305), Expect = 6e-30
Identities = 55/70 (78%), Positives = 62/70 (88%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREI+H+Q GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 233 PRAILVDWSP 262
PRA+L+D P
Sbjct: 61 PRAVLMDLEP 70
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 82.2 bits (194), Expect = 2e-16
Identities = 35/75 (46%), Positives = 53/75 (70%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP ++ VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNC 129
Query: 433 DCLQGFQLTHSLGGG 477
LQGF + +++GGG
Sbjct: 130 TGLQGFLVFNAVGGG 144
Score = 65.3 bits (152), Expect = 2e-11
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 226
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 227 YVPRAILVDWSP 262
+VPRA+ VD P
Sbjct: 61 HVPRAVFVDLEP 72
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 82.2 bits (194), Expect = 2e-16
Identities = 35/75 (46%), Positives = 53/75 (70%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP ++ VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNC 129
Query: 433 DCLQGFQLTHSLGGG 477
LQGF + +++GGG
Sbjct: 130 TGLQGFLVFNAVGGG 144
Score = 65.3 bits (152), Expect = 2e-11
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 226
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 227 YVPRAILVDWSP 262
+VPRA+ VD P
Sbjct: 61 HVPRAVFVDLEP 72
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 81.4 bits (192), Expect = 3e-16
Identities = 34/75 (45%), Positives = 53/75 (70%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP ++ VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 433 DCLQGFQLTHSLGGG 477
LQGF + +++GGG
Sbjct: 130 TGLQGFLVFNAVGGG 144
Score = 62.9 bits (146), Expect = 1e-10
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 227 YVPRAILVDWSP 262
+VPRA+ VD P
Sbjct: 61 HVPRAVFVDLEP 72
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 81.4 bits (192), Expect = 3e-16
Identities = 34/75 (45%), Positives = 53/75 (70%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP ++ VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 433 DCLQGFQLTHSLGGG 477
LQGF + +++GGG
Sbjct: 130 TGLQGFLVFNAVGGG 144
Score = 62.9 bits (146), Expect = 1e-10
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 227 YVPRAILVDWSP 262
+VPRA+ VD P
Sbjct: 61 HVPRAVFVDLEP 72
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 81.4 bits (192), Expect = 3e-16
Identities = 34/75 (45%), Positives = 53/75 (70%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP ++ VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 433 DCLQGFQLTHSLGGG 477
LQGF + +++GGG
Sbjct: 130 TGLQGFLVFNAVGGG 144
Score = 60.5 bits (140), Expect = 6e-10
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 227 YVPRAILVDWSP 262
+VPRA+ VD P
Sbjct: 61 HVPRAVFVDLEP 72
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 81.4 bits (192), Expect = 3e-16
Identities = 34/75 (45%), Positives = 53/75 (70%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP ++ VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 433 DCLQGFQLTHSLGGG 477
LQGF + +++GGG
Sbjct: 130 TGLQGFLVFNAVGGG 144
Score = 60.5 bits (140), Expect = 6e-10
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 227 YVPRAILVDWSP 262
+VPRA+ VD P
Sbjct: 61 HVPRAVFVDLEP 72
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 80.6 bits (190), Expect = 5e-16
Identities = 33/75 (44%), Positives = 54/75 (72%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP ++ VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+ +RK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNC 129
Query: 433 DCLQGFQLTHSLGGG 477
LQGF + +++GGG
Sbjct: 130 TGLQGFLVFNAVGGG 144
Score = 64.9 bits (151), Expect = 3e-11
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 226
MREI+ + GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 227 YVPRAILVDWSP 262
+VPRA+ +D P
Sbjct: 61 HVPRAVFLDLEP 72
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 67.3 bits (157), Expect = 5e-12
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +2
Query: 56 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 235
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 236 RAILVDWSP 262
RA+L+D P
Sbjct: 63 RALLIDLEP 71
Score = 62.1 bits (144), Expect = 2e-10
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKESE 426
LEP + +++G + ++ +N GAGNNWA G Y +G + + ++D++ +E++
Sbjct: 69 LEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMIDREAD 127
Query: 427 SCDCLQGFQLTHSLGGG 477
D L+GF L HS+ GG
Sbjct: 128 GSDSLEGFVLCHSIAGG 144
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 67.3 bits (157), Expect = 5e-12
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +2
Query: 56 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 235
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 236 RAILVDWSP 262
RA+L+D P
Sbjct: 63 RALLIDLEP 71
Score = 61.7 bits (143), Expect = 2e-10
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = +1
Query: 253 LEPGTMESVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKESE 426
LEP + +++G + ++ +N GAGNNWA G Y +G + + ++D++ +E++
Sbjct: 69 LEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDMIDREAD 127
Query: 427 SCDCLQGFQLTHSLGGG 477
D L+GF L HS+ GG
Sbjct: 128 GSDSLEGFVLCHSIAGG 144
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 29.9 bits (64), Expect = 0.93
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGI 142
MREIV +Q G+ N +G+ FW + G+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGL 30
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.9 bits (64), Expect = 0.93
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +1
Query: 385 LVDSVLDVVRKESESCDCLQGFQLTHS 465
+++SV VVRKE+E+C+CLQ F ++ S
Sbjct: 1 MINSV-GVVRKEAENCNCLQVFFVSGS 26
>At2g44070.1 68415.m05481 eukaryotic translation initiation factor
2B family protein / eIF-2B family protein similar to
SP|Q63186 Translation initiation factor eIF-2B delta
subunit (eIF-2B GDP-GTP exchange factor) {Rattus
norvegicus}; contains Pfam profile PF01008: Initiation
factor 2 subunit family
Length = 307
Score = 28.7 bits (61), Expect = 2.2
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 47 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNEASGG 223
YK E V L C N++G IS HG + +G ++ +L+ +N+ Y +A+
Sbjct: 213 YKFHEKVQLDYSICSNELGDP--NAISKVHGREDINYLNGLTNNAKLKFLNLMY-DATPS 269
Query: 224 KYVPRAILVDWSPAP 268
Y+ I+ D+ P
Sbjct: 270 DYI-SMIITDYGMVP 283
>At2g28400.1 68415.m03451 expressed protein contains Pfam profile
PF04520: Protein of unknown function, DUF584
Length = 162
Score = 28.7 bits (61), Expect = 2.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 52 NEGNRSSTGRPMW*PDWS*VLGDHLRRAR 138
++ ++++ P+ PDWS +LGD RR R
Sbjct: 68 SDSGKAASSLPVNVPDWSKILGDESRRQR 96
>At3g48270.1 68416.m05268 cytochrome P450 71A26, putative (CYP71A26)
identical to Cytochrome P450 71A26 (SP:Q9STK7)
{Arabidopsis thaliana}
Length = 489
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 158 YHGDSDLQ--LERINVYYNEASGGKYVPRAILVDW 256
Y G++D + +ER+N S G YVP +DW
Sbjct: 189 YGGETDFKELMERLNKLLGTFSVGSYVPWLAWIDW 223
>At2g24200.1 68415.m02891 cytosol aminopeptidase identical to
cytosol aminopeptidase SP:P30184 from [Arabidopsis
thaliana]; contains Pfam profiles: PF00883 cytosol
aminopeptidase family catalytic domain, PF02789: cytosol
aminopeptidase family N-terminal domain
Length = 520
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = -2
Query: 399 DRVNELSTL---CVVSLGPVVAGAGLSEDEVVR-TEDLSERSG 283
D++ +L+TL CV++LG +AG DE+ + SERSG
Sbjct: 393 DKIVDLATLTGACVIALGTSMAGIYTPSDELAKEVIAASERSG 435
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 5.0
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 59 EIVHLQAGQCGNQIGAKFWEIISD 130
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At1g20500.1 68414.m02554 4-coumarate--CoA ligase family /
4-coumaroyl-CoA synthase family similar to SP|Q42524 and
SP|Q9S725; contains Pfam AMP-binding enzyme domain
PF00501
Length = 412
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 376 GAELVDSVLDVVRKESESCDCLQGFQLTHSLGGG 477
GA L V + ++ + D LQG+ LT S GGG
Sbjct: 322 GAPLSKEVTEGFLEKYPTVDILQGYALTESNGGG 355
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 101 GAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILV 250
G + W I+ + TG Y DL ER+++ +++A +Y P ++
Sbjct: 45 GPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWTRQYKPAPAVI 94
>At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase GI:7939617 from
[Lycopersicon esculentum]
Length = 887
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 74 QAGQCGNQIGAKFWEIISDEHGIDPTGAYHG 166
QA G IG ++W IIS + G D T Y G
Sbjct: 678 QAWVNGQHIG-RYWNIISQKDGCDRTCDYRG 707
>At5g55690.1 68418.m06943 MADS-box protein (AGL47)
Length = 277
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 396 RVNELSTLCVVSLGPVVAGAGLSEDEVVRTEDLSERSGA 280
+ +E STLC V +V G + DE+V +L + G+
Sbjct: 31 KASEFSTLCGVDTCVIVYGPSRAGDEMVMEPELWPKDGS 69
>At1g27595.1 68414.m03365 expressed protein similar to Symplekin
(SP:Q92797) {Homo sapiens}
Length = 1091
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 153 PVGSMPCSSEMISQNLAPIW 94
PVG C SE ++Q L +W
Sbjct: 655 PVGKEVCDSERVTQGLGAVW 674
>At1g20400.1 68414.m02544 myosin heavy chain-related
Length = 944
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 333 LSEDEVVRTED-LSERSGADRFHGAGLQSTRMARG 232
LS+ RT D SERSGADRF L + G
Sbjct: 151 LSDHRRSRTPDGSSERSGADRFRAESLDDDLVEAG 185
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,171,003
Number of Sequences: 28952
Number of extensions: 198923
Number of successful extensions: 606
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 821630280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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