Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20729
(528 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 139 5e-33
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 139 5e-33
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 139 5e-33
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 139 5e-33
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 139 5e-33
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 139 5e-33
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 139 5e-33
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 139 6e-33
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 100 6e-21
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 139 bits (337), Expect = 5e-33
Identities = 62/81 (76%), Positives = 72/81 (88%), Gaps = 1/81 (1%)
Frame = +2
Query: 41 MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 220
MGFVKVVKNK YFKRYQVKF+ RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 221 TCQVAYSRIXG-AILCALLIH 280
CQ+AY+RI G I+CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 99.5 bits (237), Expect = 6e-21
Identities = 48/83 (57%), Positives = 51/83 (61%)
Frame = +1
Query: 259 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 438
IVCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 74 IVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVE 133
Query: 439 PVDNGPGAFRCYLDVGLARTTTG 507
+D PGAF CYLD GLARTTTG
Sbjct: 134 SIDGQPGAFTCYLDAGLARTTTG 156
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 139 bits (337), Expect = 5e-33
Identities = 62/81 (76%), Positives = 72/81 (88%), Gaps = 1/81 (1%)
Frame = +2
Query: 41 MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 220
MGFVKVVKNK YFKRYQVKF+ RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 221 TCQVAYSRIXG-AILCALLIH 280
CQ+AY+RI G I+CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 99.5 bits (237), Expect = 6e-21
Identities = 48/83 (57%), Positives = 51/83 (61%)
Frame = +1
Query: 259 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 438
IVCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 74 IVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVE 133
Query: 439 PVDNGPGAFRCYLDVGLARTTTG 507
+D PGAF CYLD GLARTTTG
Sbjct: 134 SIDGQPGAFTCYLDAGLARTTTG 156
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 139 bits (337), Expect = 5e-33
Identities = 62/81 (76%), Positives = 72/81 (88%), Gaps = 1/81 (1%)
Frame = +2
Query: 41 MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 220
MGFVKVVKNK YFKRYQVKF+ RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 221 TCQVAYSRIXG-AILCALLIH 280
CQ+AY+RI G I+CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 99.5 bits (237), Expect = 6e-21
Identities = 48/83 (57%), Positives = 51/83 (61%)
Frame = +1
Query: 259 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 438
IVCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 74 IVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVE 133
Query: 439 PVDNGPGAFRCYLDVGLARTTTG 507
+D PGAF CYLD GLARTTTG
Sbjct: 134 SIDGQPGAFTCYLDAGLARTTTG 156
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 139 bits (337), Expect = 5e-33
Identities = 62/81 (76%), Positives = 72/81 (88%), Gaps = 1/81 (1%)
Frame = +2
Query: 41 MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 220
MGFVKVVKNK YFKRYQVKF+ RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 221 TCQVAYSRIXG-AILCALLIH 280
CQ+AY+RI G I+CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 54.4 bits (125), Expect = 2e-07
Identities = 23/25 (92%), Positives = 25/25 (100%)
Frame = +1
Query: 259 IVCAAYSHELPRYGVKVGLTNYAAA 333
IVCAAY+HELP+YGVKVGLTNYAAA
Sbjct: 74 IVCAAYAHELPKYGVKVGLTNYAAA 98
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 139 bits (337), Expect = 5e-33
Identities = 62/81 (76%), Positives = 72/81 (88%), Gaps = 1/81 (1%)
Frame = +2
Query: 41 MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 220
MGFVKVVKNK YFKRYQVKF+ RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 221 TCQVAYSRIXG-AILCALLIH 280
CQ+AY+RI G I+CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 99.5 bits (237), Expect = 6e-21
Identities = 48/83 (57%), Positives = 51/83 (61%)
Frame = +1
Query: 259 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 438
IVCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 74 IVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVE 133
Query: 439 PVDNGPGAFRCYLDVGLARTTTG 507
+D PGAF CYLD GLARTTTG
Sbjct: 134 SIDGQPGAFTCYLDAGLARTTTG 156
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 139 bits (337), Expect = 5e-33
Identities = 62/81 (76%), Positives = 72/81 (88%), Gaps = 1/81 (1%)
Frame = +2
Query: 41 MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 220
MGFVKVVKNK YFKRYQVKF+ RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 221 TCQVAYSRIXG-AILCALLIH 280
CQ+AY+RI G I+CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 99.5 bits (237), Expect = 6e-21
Identities = 48/83 (57%), Positives = 51/83 (61%)
Frame = +1
Query: 259 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 438
IVCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 74 IVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVE 133
Query: 439 PVDNGPGAFRCYLDVGLARTTTG 507
+D PGAF CYLD GLARTTTG
Sbjct: 134 SIDGQPGAFTCYLDAGLARTTTG 156
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 139 bits (337), Expect = 5e-33
Identities = 62/81 (76%), Positives = 72/81 (88%), Gaps = 1/81 (1%)
Frame = +2
Query: 41 MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 220
MGFVKVVKNK YFKRYQVKF+ RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 67
Query: 221 TCQVAYSRIXG-AILCALLIH 280
CQ+AY+RI G I+CA H
Sbjct: 68 ICQIAYARIEGDMIVCAAYAH 88
Score = 99.5 bits (237), Expect = 6e-21
Identities = 48/83 (57%), Positives = 51/83 (61%)
Frame = +1
Query: 259 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 438
IVCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 81 IVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVE 140
Query: 439 PVDNGPGAFRCYLDVGLARTTTG 507
+D PGAF CYLD GLARTTTG
Sbjct: 141 SIDGQPGAFTCYLDAGLARTTTG 163
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 139 bits (336), Expect = 6e-33
Identities = 62/81 (76%), Positives = 72/81 (88%), Gaps = 1/81 (1%)
Frame = +2
Query: 41 MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 220
MGFVKVVKNK YFKRYQVKF+ RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 221 TCQVAYSRIXG-AILCALLIH 280
CQ+AY+RI G I+CA H
Sbjct: 61 ICQIAYARIEGDMIVCARYAH 81
Score = 97.5 bits (232), Expect = 3e-20
Identities = 47/83 (56%), Positives = 50/83 (60%)
Frame = +1
Query: 259 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 438
IVCA Y+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 74 IVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVE 133
Query: 439 PVDNGPGAFRCYLDVGLARTTTG 507
+D PGAF CYLD GLARTTTG
Sbjct: 134 SIDGQPGAFTCYLDAGLARTTTG 156
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 99.5 bits (237), Expect = 6e-21
Identities = 48/83 (57%), Positives = 51/83 (61%)
Frame = +1
Query: 259 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 438
IVCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 24 IVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVE 83
Query: 439 PVDNGPGAFRCYLDVGLARTTTG 507
+D PGAF CYLD GLARTTTG
Sbjct: 84 SIDGQPGAFTCYLDAGLARTTTG 106
Score = 39.1 bits (87), Expect = 0.009
Identities = 16/31 (51%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Frame = +2
Query: 191 LIVRLSNKDVTCQVAYSRIXG-AILCALLIH 280
+IVR++N+D+ CQ+AY+RI G I+CA H
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAH 31
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,841,377
Number of Sequences: 237096
Number of extensions: 1465321
Number of successful extensions: 2241
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2233
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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