Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20729
         (528 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011515-1|AAS15651.1|  178|Drosophila melanogaster SD13191p pro...   140   8e-34
AY071305-1|AAL48927.1|  299|Drosophila melanogaster RE33114p pro...   140   8e-34
AE014134-3599|EAA46018.1|  178|Drosophila melanogaster CG17489-P...   140   8e-34
AE014134-3598|EAA46020.1|  178|Drosophila melanogaster CG17489-P...   140   8e-34
AE014134-3597|EAA46016.1|  299|Drosophila melanogaster CG17489-P...   140   8e-34
AE014134-3596|EAA46019.1|  299|Drosophila melanogaster CG17489-P...   140   8e-34
AE014134-3595|EAA46017.2|  320|Drosophila melanogaster CG17489-P...   138   3e-33
AF195190-1|AAF27819.1|  177|Drosophila melanogaster yippee inter...    61   1e-09

>BT011515-1|AAS15651.1|  178|Drosophila melanogaster SD13191p
           protein.
          Length = 178

 Score =  140 bits (340), Expect = 8e-34
 Identities = 65/81 (80%), Positives = 71/81 (87%), Gaps = 1/81 (1%)
 Frame = +2

Query: 41  MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 220
           MGFVKVVKNKQYFKRYQVKF+ RREGKTDYYARKRL  QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1   MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60

Query: 221 TCQVAYSRIXG-AILCALLIH 280
           T Q+AY+RI G  ++CA   H
Sbjct: 61  TVQIAYARIEGDRVVCAAYSH 81



 Score =  106 bits (254), Expect = 2e-23
 Identities = 49/83 (59%), Positives = 56/83 (67%)
 Frame = +1

Query: 259 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 438
           +VCAAYSHELP+YG++VGLTNYAAAY TG                          E+NVE
Sbjct: 74  VVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVE 133

Query: 439 PVDNGPGAFRCYLDVGLARTTTG 507
           PVD+GPGAFRC+LDVGLARTTTG
Sbjct: 134 PVDDGPGAFRCFLDVGLARTTTG 156


>AY071305-1|AAL48927.1|  299|Drosophila melanogaster RE33114p
           protein.
          Length = 299

 Score =  140 bits (340), Expect = 8e-34
 Identities = 65/81 (80%), Positives = 71/81 (87%), Gaps = 1/81 (1%)
 Frame = +2

Query: 41  MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 220
           MGFVKVVKNKQYFKRYQVKF+ RREGKTDYYARKRL  QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1   MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60

Query: 221 TCQVAYSRIXG-AILCALLIH 280
           T Q+AY+RI G  ++CA   H
Sbjct: 61  TVQIAYARIEGDRVVCAAYSH 81



 Score =  106 bits (254), Expect = 2e-23
 Identities = 49/83 (59%), Positives = 56/83 (67%)
 Frame = +1

Query: 259 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 438
           +VCAAYSHELP+YG++VGLTNYAAAY TG                          E+NVE
Sbjct: 74  VVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVE 133

Query: 439 PVDNGPGAFRCYLDVGLARTTTG 507
           PVD+GPGAFRC+LDVGLARTTTG
Sbjct: 134 PVDDGPGAFRCFLDVGLARTTTG 156


>AE014134-3599|EAA46018.1|  178|Drosophila melanogaster CG17489-PE,
           isoform E protein.
          Length = 178

 Score =  140 bits (340), Expect = 8e-34
 Identities = 65/81 (80%), Positives = 71/81 (87%), Gaps = 1/81 (1%)
 Frame = +2

Query: 41  MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 220
           MGFVKVVKNKQYFKRYQVKF+ RREGKTDYYARKRL  QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1   MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60

Query: 221 TCQVAYSRIXG-AILCALLIH 280
           T Q+AY+RI G  ++CA   H
Sbjct: 61  TVQIAYARIEGDRVVCAAYSH 81



 Score =  106 bits (254), Expect = 2e-23
 Identities = 49/83 (59%), Positives = 56/83 (67%)
 Frame = +1

Query: 259 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 438
           +VCAAYSHELP+YG++VGLTNYAAAY TG                          E+NVE
Sbjct: 74  VVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVE 133

Query: 439 PVDNGPGAFRCYLDVGLARTTTG 507
           PVD+GPGAFRC+LDVGLARTTTG
Sbjct: 134 PVDDGPGAFRCFLDVGLARTTTG 156


>AE014134-3598|EAA46020.1|  178|Drosophila melanogaster CG17489-PD,
           isoform D protein.
          Length = 178

 Score =  140 bits (340), Expect = 8e-34
 Identities = 65/81 (80%), Positives = 71/81 (87%), Gaps = 1/81 (1%)
 Frame = +2

Query: 41  MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 220
           MGFVKVVKNKQYFKRYQVKF+ RREGKTDYYARKRL  QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1   MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60

Query: 221 TCQVAYSRIXG-AILCALLIH 280
           T Q+AY+RI G  ++CA   H
Sbjct: 61  TVQIAYARIEGDRVVCAAYSH 81



 Score =  106 bits (254), Expect = 2e-23
 Identities = 49/83 (59%), Positives = 56/83 (67%)
 Frame = +1

Query: 259 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 438
           +VCAAYSHELP+YG++VGLTNYAAAY TG                          E+NVE
Sbjct: 74  VVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVE 133

Query: 439 PVDNGPGAFRCYLDVGLARTTTG 507
           PVD+GPGAFRC+LDVGLARTTTG
Sbjct: 134 PVDDGPGAFRCFLDVGLARTTTG 156


>AE014134-3597|EAA46016.1|  299|Drosophila melanogaster CG17489-PB,
           isoform B protein.
          Length = 299

 Score =  140 bits (340), Expect = 8e-34
 Identities = 65/81 (80%), Positives = 71/81 (87%), Gaps = 1/81 (1%)
 Frame = +2

Query: 41  MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 220
           MGFVKVVKNKQYFKRYQVKF+ RREGKTDYYARKRL  QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1   MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60

Query: 221 TCQVAYSRIXG-AILCALLIH 280
           T Q+AY+RI G  ++CA   H
Sbjct: 61  TVQIAYARIEGDRVVCAAYSH 81



 Score =  106 bits (254), Expect = 2e-23
 Identities = 49/83 (59%), Positives = 56/83 (67%)
 Frame = +1

Query: 259 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 438
           +VCAAYSHELP+YG++VGLTNYAAAY TG                          E+NVE
Sbjct: 74  VVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVE 133

Query: 439 PVDNGPGAFRCYLDVGLARTTTG 507
           PVD+GPGAFRC+LDVGLARTTTG
Sbjct: 134 PVDDGPGAFRCFLDVGLARTTTG 156


>AE014134-3596|EAA46019.1|  299|Drosophila melanogaster CG17489-PA,
           isoform A protein.
          Length = 299

 Score =  140 bits (340), Expect = 8e-34
 Identities = 65/81 (80%), Positives = 71/81 (87%), Gaps = 1/81 (1%)
 Frame = +2

Query: 41  MGFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 220
           MGFVKVVKNKQYFKRYQVKF+ RREGKTDYYARKRL  QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1   MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60

Query: 221 TCQVAYSRIXG-AILCALLIH 280
           T Q+AY+RI G  ++CA   H
Sbjct: 61  TVQIAYARIEGDRVVCAAYSH 81



 Score =  106 bits (254), Expect = 2e-23
 Identities = 49/83 (59%), Positives = 56/83 (67%)
 Frame = +1

Query: 259 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 438
           +VCAAYSHELP+YG++VGLTNYAAAY TG                          E+NVE
Sbjct: 74  VVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVE 133

Query: 439 PVDNGPGAFRCYLDVGLARTTTG 507
           PVD+GPGAFRC+LDVGLARTTTG
Sbjct: 134 PVDDGPGAFRCFLDVGLARTTTG 156


>AE014134-3595|EAA46017.2|  320|Drosophila melanogaster CG17489-PC,
           isoform C protein.
          Length = 320

 Score =  138 bits (335), Expect = 3e-33
 Identities = 64/80 (80%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
 Frame = +2

Query: 44  GFVKVVKNKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVT 223
           GFVKVVKNKQYFKRYQVKF+ RREGKTDYYARKRL  QDKNKYNTPKYRLIVRLSNKD+T
Sbjct: 23  GFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDIT 82

Query: 224 CQVAYSRIXG-AILCALLIH 280
            Q+AY+RI G  ++CA   H
Sbjct: 83  VQIAYARIEGDRVVCAAYSH 102



 Score =  106 bits (254), Expect = 2e-23
 Identities = 49/83 (59%), Positives = 56/83 (67%)
 Frame = +1

Query: 259 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 438
           +VCAAYSHELP+YG++VGLTNYAAAY TG                          E+NVE
Sbjct: 95  VVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVE 154

Query: 439 PVDNGPGAFRCYLDVGLARTTTG 507
           PVD+GPGAFRC+LDVGLARTTTG
Sbjct: 155 PVDDGPGAFRCFLDVGLARTTTG 177


>AF195190-1|AAF27819.1|  177|Drosophila melanogaster yippee
           interacting protein 6 protein.
          Length = 177

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 25/28 (89%), Positives = 28/28 (100%)
 Frame = +1

Query: 424 EYNVEPVDNGPGAFRCYLDVGLARTTTG 507
           E+NVEPVD+GPGAFRC+LDVGLARTTTG
Sbjct: 14  EFNVEPVDDGPGAFRCFLDVGLARTTTG 41


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,330,199
Number of Sequences: 53049
Number of extensions: 453681
Number of successful extensions: 1226
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1219
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)