Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20728
         (699 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC128143-1|AAI28144.1|  332|Homo sapiens C4orf29 protein protein.      97   4e-20
BC034253-1|AAH34253.1|  414|Homo sapiens chromosome 4 open readi...    97   4e-20
BC128142-1|AAI28143.1|  321|Homo sapiens C4orf29 protein protein.      80   9e-15

>BC128143-1|AAI28144.1|  332|Homo sapiens C4orf29 protein protein.
          Length = 332

 Score = 97.5 bits (232), Expect = 4e-20
 Identities = 41/63 (65%), Positives = 51/63 (80%)
 Frame = +3

Query: 510 HFYWRRRNLMVKPLLKEAGIGGIILENPFYGLRKPIDQIRSSLHNVSDIFVMGGCLILES 689
           H YWRRR LM +P++KEA +  ++LENP+YG RKP DQ+RSSL NVSD+FVMGG L+LES
Sbjct: 37  HHYWRRRTLMARPMIKEARMASLLLENPYYGCRKPKDQVRSSLKNVSDLFVMGGALVLES 96

Query: 690 LVL 698
             L
Sbjct: 97  AAL 99


>BC034253-1|AAH34253.1|  414|Homo sapiens chromosome 4 open reading
           frame 29 protein.
          Length = 414

 Score = 97.5 bits (232), Expect = 4e-20
 Identities = 41/63 (65%), Positives = 51/63 (80%)
 Frame = +3

Query: 510 HFYWRRRNLMVKPLLKEAGIGGIILENPFYGLRKPIDQIRSSLHNVSDIFVMGGCLILES 689
           H YWRRR LM +P++KEA +  ++LENP+YG RKP DQ+RSSL NVSD+FVMGG L+LES
Sbjct: 119 HHYWRRRTLMARPMIKEARMASLLLENPYYGCRKPKDQVRSSLKNVSDLFVMGGALVLES 178

Query: 690 LVL 698
             L
Sbjct: 179 AAL 181



 Score = 83.4 bits (197), Expect = 7e-16
 Identities = 39/101 (38%), Positives = 61/101 (60%)
 Frame = +1

Query: 196 INKILYERLG*AGKLAQIIRFRKVVSNREECFKLVERDYPVTITKEQNVAEGKLLEGYFT 375
           + K+     G    L ++  FRK++ NRE C  LV  DYPV I K +  ++ K+L+G+F 
Sbjct: 15  LTKLFIRGWGRPEDLKRLFEFRKMIGNRERCQNLVSSDYPVHIDKIEEQSDCKILDGHFV 74

Query: 376 SPLEKHLPGIVPEIAQKAHFQALLPTKWPDKDCKPVCLHLA 498
           SP+  ++P I+P  +  A FQ ++P +W  K  +PVC+HLA
Sbjct: 75  SPMAHYVPDIMPIESVIARFQFIVPKEWNSK-YRPVCIHLA 114



 Score = 54.8 bits (126), Expect = 3e-07
 Identities = 24/54 (44%), Positives = 33/54 (61%)
 Frame = +2

Query: 155 MSASKLDAVYRSILLTKFFTKGWGKPENLRRLFGSEKLYRIVKNASNWLKETIP 316
           M  SKLD +YR +LLTK F +GWG+PE+L+RLF   K+    +   N +    P
Sbjct: 1   MGVSKLDILYRRLLLTKLFIRGWGRPEDLKRLFEFRKMIGNRERCQNLVSSDYP 54


>BC128142-1|AAI28143.1|  321|Homo sapiens C4orf29 protein protein.
          Length = 321

 Score = 79.8 bits (188), Expect = 9e-15
 Identities = 34/54 (62%), Positives = 44/54 (81%)
 Frame = +3

Query: 537 MVKPLLKEAGIGGIILENPFYGLRKPIDQIRSSLHNVSDIFVMGGCLILESLVL 698
           M +P++KEA +  ++LENP+YG RKP DQ+RSSL NVSD+FVMGG L+LES  L
Sbjct: 1   MARPMIKEARMASLLLENPYYGCRKPKDQVRSSLKNVSDLFVMGGALVLESAAL 54


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,124,764
Number of Sequences: 237096
Number of extensions: 2130853
Number of successful extensions: 3996
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3996
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)