BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20728 (699 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 24 1.6 DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 3.7 DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 23 3.7 AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 6.4 AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 6.4 AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 8.5 >AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase protein. Length = 693 Score = 23.8 bits (49), Expect = 1.6 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = +1 Query: 277 REECFKLVERD-YPVTITKEQNVAEGKLLEGYFTSPLEK 390 RE+ ++E D +P+T+ +N E K + T P E+ Sbjct: 519 REQKNLMIELDKFPITLQPGKNTIEQKSTKSSVTIPFER 557 >DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride channel protein. Length = 428 Score = 22.6 bits (46), Expect = 3.7 Identities = 14/51 (27%), Positives = 28/51 (54%) Frame = +2 Query: 32 TYFKFNQSFLFQPIC*RNKLGNQSYNFNLKTILFSIKIT*RMSASKLDAVY 184 ++FK +S FQ + N + + + KTIL+ +K+T ++S + +Y Sbjct: 123 SFFKNAKSVTFQTMTIPN---HYLWLYKDKTILYMVKLTLKLSCAMNFLIY 170 >DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor protein. Length = 405 Score = 22.6 bits (46), Expect = 3.7 Identities = 9/28 (32%), Positives = 18/28 (64%) Frame = -1 Query: 261 SEPNNLRKFSGLPQPFVKNFVNRILRYT 178 +EP++ K SG+ + ++ +NR+ R T Sbjct: 275 AEPSSTSKKSGIVRSHQQSCINRVARET 302 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 21.8 bits (44), Expect = 6.4 Identities = 9/22 (40%), Positives = 12/22 (54%) Frame = +3 Query: 213 RKAGVSRKTCADYSVQKSCIES 278 R+ V+ C+DY Q IES Sbjct: 967 RRLNVNETVCSDYFSQGGVIES 988 >AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein protein. Length = 352 Score = 21.8 bits (44), Expect = 6.4 Identities = 8/16 (50%), Positives = 12/16 (75%) Frame = -1 Query: 696 APKTPRSSSLPSQIYP 649 AP+ S++LPS +YP Sbjct: 247 APQGAASANLPSPLYP 262 >AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly protein MRJP6 protein. Length = 437 Score = 21.4 bits (43), Expect = 8.5 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = +3 Query: 618 DQIRSSLHNVSDIFVMGGCLI 680 D + SSL+ +S+ GGCL+ Sbjct: 88 DGVPSSLNVISEKIGNGGCLL 108 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 194,636 Number of Sequences: 438 Number of extensions: 4457 Number of successful extensions: 6 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 21439440 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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