Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20726
         (681 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    30   0.078
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    27   0.72 
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     25   2.2  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   2.9  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   5.1  
Z49832-1|CAA89993.1|  155|Anopheles gambiae serine proteinase pr...    23   6.7  
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    23   8.9  

>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 29.9 bits (64), Expect = 0.078
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +1

Query: 55   QVYHQKYTPPL--IPPRGRSTPPMPSTLEASTKK 150
            +V  ++ +PP+  IPPR R  PP P T E   ++
Sbjct: 1096 EVEEEEVSPPVPPIPPRSRRLPPSPRTTEMRRRR 1129


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 26.6 bits (56), Expect = 0.72
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +1

Query: 79   PPLIPPRGRSTPPMPSTLEA 138
            PP IP R R  PP P T+ A
Sbjct: 1116 PPPIPMRRRGLPPSPRTVRA 1135


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
 Frame = +2

Query: 386 ASAW-QTRYAKL--YPNRLELHLENSAKPEMILLDTVEEVSSDFFP 514
           + AW Q  + +L  YPNRL L  +      M+LL   +    DF P
Sbjct: 298 SEAWNQANFERLLLYPNRLPLAKQRLEAFRMMLLQINQRNKHDFAP 343


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +3

Query: 510 FHQGRAVHRAANPKRHQGRAHEYGRDRPEGVGLSLRSAH 626
           FH+    HR     R  GR  + G+  PE    +L + H
Sbjct: 231 FHRQSPAHRRKPRWRRAGRRWKVGQFLPESFCFALEAVH 269



 Score = 23.0 bits (47), Expect = 8.9
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 440 HLENSAKPEMILLDTVEEVSSDFFPSRES 526
           HL  S  P  +  + +E + +D FP   S
Sbjct: 386 HLRGSRTPPELDREVLERIVTDLFPDHNS 414


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 474  CWTLSRRFPPTSFHQGRAVHRAANP 548
            CW  S      SFH G ++  + NP
Sbjct: 1229 CWEWSMSATNKSFHAGLSIAASVNP 1253


>Z49832-1|CAA89993.1|  155|Anopheles gambiae serine proteinase
           protein.
          Length = 155

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = -3

Query: 514 WKE--VGGNLLDSVQQNHFGLGAVLEVQLEPVRVQ 416
           W+E  V G+L+D+V     G G  L   L+ +++Q
Sbjct: 79  WREPNVPGDLMDAVGFGALGFGERLSSTLQKIQLQ 113


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 76  TPPLIPPRGRSTPPMPS 126
           T P+IPP     PP P+
Sbjct: 291 TIPVIPPNAADPPPTPA 307


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,302
Number of Sequences: 2352
Number of extensions: 13257
Number of successful extensions: 44
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)