BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20726 (681 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g10540.1 68416.m01265 3-phosphoinositide-dependent protein ki... 31 0.53 At5g04510.2 68418.m00450 3-phosphoinositide-dependent protein ki... 31 0.71 At5g04510.1 68418.m00451 3-phosphoinositide-dependent protein ki... 31 0.71 At2g44830.1 68415.m05582 protein kinase, putative similar to pro... 30 1.2 At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 30 1.6 At5g07670.1 68418.m00878 F-box family protein similar to unknown... 29 2.2 At3g24080.1 68416.m03024 KRR1 family protein contains Pfam PF051... 29 2.2 At3g23310.1 68416.m02940 protein kinase, putative contains prote... 29 2.2 At1g51170.1 68414.m05754 protein kinase family protein 29 2.8 At4g26610.1 68417.m03835 protein kinase, putative similar to pro... 28 5.0 At1g30640.1 68414.m03747 protein kinase, putative contains prote... 28 5.0 At4g35130.1 68417.m04994 pentatricopeptide (PPR) repeat-containi... 28 6.6 At3g52190.1 68416.m05731 transducin family protein / WD-40 repea... 28 6.6 At3g25250.1 68416.m03154 protein kinase family protein contains ... 28 6.6 At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit... 28 6.6 At1g76310.1 68414.m08864 cyclin, putative similar to B-like cycl... 28 6.6 At1g19370.1 68414.m02410 expressed protein 28 6.6 At5g52440.1 68418.m06507 HCF106 protein identical to HCF106 [Ara... 27 8.7 At5g47750.1 68418.m05899 protein kinase, putative similar to pro... 27 8.7 At5g23770.1 68418.m02791 agenet domain-containing protein contai... 27 8.7 At2g26690.1 68415.m03201 nitrate transporter (NTP2) identical to... 27 8.7 At1g79250.1 68414.m09239 protein kinase, putative similar to vir... 27 8.7 >At3g10540.1 68416.m01265 3-phosphoinositide-dependent protein kinase, putative similar to 3-phosphoinositide-dependent protein kinase-1 [Oryza sativa] gi|5001830|gb|AAD37166 Length = 486 Score = 31.5 bits (68), Expect = 0.53 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +1 Query: 16 MKEHVFFAGIDWQQVYHQKYTPPLIPPRGRSTPPMP 123 +K H FF G+DW+ + Q TPP + P S P Sbjct: 306 LKRHPFFKGVDWKNLRSQ--TPPKLAPDPASQSASP 339 >At5g04510.2 68418.m00450 3-phosphoinositide-dependent protein kinase, putative similar to 3-phosphoinositide-dependent protein kinase-1 [Oryza sativa] gi|5001830|gb|AAD37166 Length = 408 Score = 31.1 bits (67), Expect = 0.71 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +1 Query: 16 MKEHVFFAGIDWQQVYHQKYTPPLIPPRGRSTPPMP 123 +K H FF G+DW+ + Q TPP + P S P Sbjct: 305 LKRHPFFNGVDWKNLRSQ--TPPKLAPDPASQTASP 338 >At5g04510.1 68418.m00451 3-phosphoinositide-dependent protein kinase, putative similar to 3-phosphoinositide-dependent protein kinase-1 [Oryza sativa] gi|5001830|gb|AAD37166 Length = 491 Score = 31.1 bits (67), Expect = 0.71 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +1 Query: 16 MKEHVFFAGIDWQQVYHQKYTPPLIPPRGRSTPPMP 123 +K H FF G+DW+ + Q TPP + P S P Sbjct: 305 LKRHPFFNGVDWKNLRSQ--TPPKLAPDPASQTASP 338 >At2g44830.1 68415.m05582 protein kinase, putative similar to protein kinase PVPK-1 [Phaseolus vulgaris] SWISS-PROT:P15792 Length = 765 Score = 30.3 bits (65), Expect = 1.2 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = +1 Query: 16 MKEHVFFAGIDWQQVYHQKYTPPLIPPRGRSTPP 117 +K+H FF G++W + + TPP +P + + PP Sbjct: 691 IKQHPFFEGVNWALI--RCSTPPEVPRQMETEPP 722 >At2g15880.1 68415.m01820 leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 727 Score = 29.9 bits (64), Expect = 1.6 Identities = 11/30 (36%), Positives = 20/30 (66%) Frame = +1 Query: 73 YTPPLIPPRGRSTPPMPSTLEASTKKTPKE 162 Y+PPL+PP+ S+PP + + + +TP + Sbjct: 667 YSPPLLPPK-MSSPPTQTPVNSPPPRTPSQ 695 >At5g07670.1 68418.m00878 F-box family protein similar to unknown protein (pir||C71419) ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 Length = 476 Score = 29.5 bits (63), Expect = 2.2 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +1 Query: 550 NDTKVVLTNTDEIGLKEWACRCVRLTNVPRTPCLD 654 N K+V+TNT E+GL A C RL + C D Sbjct: 186 NLRKLVVTNTSELGLLNVAEECSRLQELELHKCSD 220 >At3g24080.1 68416.m03024 KRR1 family protein contains Pfam PF05178: Krr1 family Length = 638 Score = 29.5 bits (63), Expect = 2.2 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Frame = +2 Query: 275 DKLEQKRKAKQKQKFDADEKESDCILHGYIKKLGGPFASAWQTR--YAKLYPNRLEL 439 ++ E + K K+K+K +K + ++ Y K +TR YAK+ PNR EL Sbjct: 461 EEKEAEGKRKRKRKTSLVQKTKEALMEEYYKLDYEDTIGELRTRFKYAKVQPNRFEL 517 >At3g23310.1 68416.m02940 protein kinase, putative contains protein kinase domain, Pfam:PF00069 Length = 568 Score = 29.5 bits (63), Expect = 2.2 Identities = 8/19 (42%), Positives = 16/19 (84%) Frame = +1 Query: 16 MKEHVFFAGIDWQQVYHQK 72 +KEH +F+G++W+++Y K Sbjct: 415 IKEHPWFSGVEWEKLYQMK 433 >At1g51170.1 68414.m05754 protein kinase family protein Length = 404 Score = 29.1 bits (62), Expect = 2.8 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +1 Query: 16 MKEHVFFAGIDWQQVYHQKYTPPLIPPR 99 +KEH FF G+ W ++ + PP IP R Sbjct: 334 IKEHAFFKGVRW-ELLTEVLRPPFIPLR 360 >At4g26610.1 68417.m03835 protein kinase, putative similar to protein kinase G11A [Oryza sativa] SWISS-PROT:P47997 Length = 506 Score = 28.3 bits (60), Expect = 5.0 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Frame = +1 Query: 16 MKEHVFFAGIDWQQVYHQKYTPPLIPP--RGRSTPPMPSTLEASTKKT 153 MK+H FF G++W V + +PP IP S P P+ +++ K+ Sbjct: 450 MKQHPFFEGVNWALV--RCASPPEIPKPVDYESAPATPAAATSTSVKS 495 >At1g30640.1 68414.m03747 protein kinase, putative contains protein kinase domain, Pfam:PF00069 Length = 562 Score = 28.3 bits (60), Expect = 5.0 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 6/53 (11%) Frame = +1 Query: 16 MKEHVFFAGIDWQQVYHQK--YTP----PLIPPRGRSTPPMPSTLEASTKKTP 156 +K H +F G++W+++Y Y P L +PST + S+K +P Sbjct: 417 IKAHPWFRGVEWERLYESNAPYIPQVKHELDTQNFEKFDEVPSTCQTSSKSSP 469 >At4g35130.1 68417.m04994 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat Length = 804 Score = 27.9 bits (59), Expect = 6.6 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%) Frame = -3 Query: 274 GFQVDRMNTVSATSACQRSDITK-GKSLYC 188 GF+ DR +T+SA AC K GK ++C Sbjct: 226 GFKPDRFSTMSALGACSHVYSPKMGKEIHC 255 >At3g52190.1 68416.m05731 transducin family protein / WD-40 repeat family protein similar to St12p protein (GI:166878) {Arabidopsis thaliana}; contains Pfam profile: PF00400 WD domain, G-beta repeat Length = 398 Score = 27.9 bits (59), Expect = 6.6 Identities = 17/65 (26%), Positives = 30/65 (46%) Frame = +3 Query: 78 SATDTAAREVNAADAFDIGSFDEEDTKGIKLTETDQMQYKDFPLVISERWQAEVAETVFI 257 ++TD +AR A D F + + + + I+L + K F ++R + V+ Sbjct: 182 TSTDGSARIWKAEDGFPLSTLERSGDENIELCRFSKDGTKPFLFCAAQRGDTPMV-NVYD 240 Query: 258 RSTWK 272 STWK Sbjct: 241 ISTWK 245 >At3g25250.1 68416.m03154 protein kinase family protein contains protein kinase domain, Pfam:PF00069 Length = 421 Score = 27.9 bits (59), Expect = 6.6 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +1 Query: 16 MKEHVFFAGIDWQQVYHQKYTPPLIP 93 +K H FF G+DW++V PP IP Sbjct: 323 IKGHDFFRGVDWEKVILVS-RPPYIP 347 >At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit A / V-ATPase A subunit / vacuolar proton pump alpha subunit / V-ATPase 69 kDa subunit identical to SP|O23654 Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14) (V-ATPase A subunit) (Vacuolar proton pump alpha subunit) (V-ATPase 69 kDa subunit) {Arabidopsis thaliana} Length = 623 Score = 27.9 bits (59), Expect = 6.6 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +2 Query: 317 FDADEKESDCILHGYIKKLGGPFASAWQTRYAKLY 421 F+ DEKES+ +GY++K+ GP A A +Y Sbjct: 12 FEDDEKESE---YGYVRKVSGPVVVADGMAGAAMY 43 >At1g76310.1 68414.m08864 cyclin, putative similar to B-like cyclin GI:780267 from (Medicago sativa); contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain Length = 431 Score = 27.9 bits (59), Expect = 6.6 Identities = 10/32 (31%), Positives = 21/32 (65%) Frame = +2 Query: 410 AKLYPNRLELHLENSAKPEMILLDTVEEVSSD 505 A+L N L++H E + KP++I + ++ + +D Sbjct: 85 AQLAENNLQIHKEETKKPDLISNEALDRIITD 116 >At1g19370.1 68414.m02410 expressed protein Length = 605 Score = 27.9 bits (59), Expect = 6.6 Identities = 24/94 (25%), Positives = 41/94 (43%) Frame = +2 Query: 251 IHTVNLEADKLEQKRKAKQKQKFDADEKESDCILHGYIKKLGGPFASAWQTRYAKLYPNR 430 IH + L D + K + + K+KF +E + + GY+ + A+ N Sbjct: 345 IHVL-LHGDIMNFKCRVRSKKKFQMEEPVALQSIKGYLLVINEEKVFAF---------NV 394 Query: 431 LELHLENSAKPEMILLDTVEEVSSDFFPSRESSA 532 H +A P ++ +EE+ S F RESS+ Sbjct: 395 STQHYVRTAGPRLLFSAGLEEIRSAFLSHRESSS 428 >At5g52440.1 68418.m06507 HCF106 protein identical to HCF106 [Arabidopsis thaliana] GI:4894914; contains Pfam profile PF02416: mttA/Hcf106 family Length = 260 Score = 27.5 bits (58), Expect = 8.7 Identities = 14/40 (35%), Positives = 18/40 (45%) Frame = +1 Query: 43 IDWQQVYHQKYTPPLIPPRGRSTPPMPSTLEASTKKTPKE 162 I VY+Q T P+ PP P +PST T P + Sbjct: 151 ISTPNVYNQNRTNPVQPPPPPPPPSVPSTEAPVTANDPND 190 >At5g47750.1 68418.m05899 protein kinase, putative similar to protein kinase G11A [Oryza sativa] SWISS-PROT:P47997 Length = 586 Score = 27.5 bits (58), Expect = 8.7 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = +1 Query: 16 MKEHVFFAGIDWQQVYHQKYTPPLIPPRGRSTPPMPSTLEA-STKKT 153 +K+H FF G++W + + TPP IP S EA S++KT Sbjct: 521 VKQHPFFEGVNWALI--RCATPPEIPKPVELEKGAVSVAEAPSSQKT 565 >At5g23770.1 68418.m02791 agenet domain-containing protein contains Pfam PF05641: Agenet domain Length = 438 Score = 27.5 bits (58), Expect = 8.7 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +1 Query: 79 PPLIPPRGRSTPPMPSTLEASTKK 150 PPL PP G TPP+ +EA T++ Sbjct: 185 PPLTPPPGIITPPL-KQIEAGTQR 207 >At2g26690.1 68415.m03201 nitrate transporter (NTP2) identical to nitrate transporter (ntp2) [Arabidopsis thaliana] GI:4490321 Length = 577 Score = 27.5 bits (58), Expect = 8.7 Identities = 12/43 (27%), Positives = 23/43 (53%) Frame = +3 Query: 144 EEDTKGIKLTETDQMQYKDFPLVISERWQAEVAETVFIRSTWK 272 E++ +GI++ TDQ D +++E + + V I + WK Sbjct: 274 EDNPEGIRIEHTDQFHLLDKAAIVAEGDFEQTLDGVAIPNPWK 316 >At1g79250.1 68414.m09239 protein kinase, putative similar to viroid symptom modulation protein/dual-specificity protein kinase [Lycopersicon esculentum] gi|7672777|gb|AAF66637 Length = 555 Score = 27.5 bits (58), Expect = 8.7 Identities = 10/26 (38%), Positives = 17/26 (65%) Frame = +1 Query: 16 MKEHVFFAGIDWQQVYHQKYTPPLIP 93 +K+H FF G++W + + TPP +P Sbjct: 474 IKQHPFFEGVNWALI--RSATPPHVP 497 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,215,743 Number of Sequences: 28952 Number of extensions: 292093 Number of successful extensions: 1261 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 1134 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1259 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1438152744 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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