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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20726
         (681 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g10540.1 68416.m01265 3-phosphoinositide-dependent protein ki...    31   0.53 
At5g04510.2 68418.m00450 3-phosphoinositide-dependent protein ki...    31   0.71 
At5g04510.1 68418.m00451 3-phosphoinositide-dependent protein ki...    31   0.71 
At2g44830.1 68415.m05582 protein kinase, putative similar to pro...    30   1.2  
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex...    30   1.6  
At5g07670.1 68418.m00878 F-box family protein similar to unknown...    29   2.2  
At3g24080.1 68416.m03024 KRR1 family protein contains Pfam PF051...    29   2.2  
At3g23310.1 68416.m02940 protein kinase, putative contains prote...    29   2.2  
At1g51170.1 68414.m05754 protein kinase family protein                 29   2.8  
At4g26610.1 68417.m03835 protein kinase, putative similar to pro...    28   5.0  
At1g30640.1 68414.m03747 protein kinase, putative contains prote...    28   5.0  
At4g35130.1 68417.m04994 pentatricopeptide (PPR) repeat-containi...    28   6.6  
At3g52190.1 68416.m05731 transducin family protein / WD-40 repea...    28   6.6  
At3g25250.1 68416.m03154 protein kinase family protein contains ...    28   6.6  
At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit...    28   6.6  
At1g76310.1 68414.m08864 cyclin, putative similar to B-like cycl...    28   6.6  
At1g19370.1 68414.m02410 expressed protein                             28   6.6  
At5g52440.1 68418.m06507 HCF106 protein identical to HCF106 [Ara...    27   8.7  
At5g47750.1 68418.m05899 protein kinase, putative similar to pro...    27   8.7  
At5g23770.1 68418.m02791 agenet domain-containing protein contai...    27   8.7  
At2g26690.1 68415.m03201 nitrate transporter (NTP2) identical to...    27   8.7  
At1g79250.1 68414.m09239 protein kinase, putative similar to vir...    27   8.7  

>At3g10540.1 68416.m01265 3-phosphoinositide-dependent protein
           kinase, putative similar to 3-phosphoinositide-dependent
           protein kinase-1 [Oryza sativa] gi|5001830|gb|AAD37166
          Length = 486

 Score = 31.5 bits (68), Expect = 0.53
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 16  MKEHVFFAGIDWQQVYHQKYTPPLIPPRGRSTPPMP 123
           +K H FF G+DW+ +  Q  TPP + P   S    P
Sbjct: 306 LKRHPFFKGVDWKNLRSQ--TPPKLAPDPASQSASP 339


>At5g04510.2 68418.m00450 3-phosphoinositide-dependent protein
           kinase, putative similar to 3-phosphoinositide-dependent
           protein kinase-1 [Oryza sativa] gi|5001830|gb|AAD37166
          Length = 408

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 16  MKEHVFFAGIDWQQVYHQKYTPPLIPPRGRSTPPMP 123
           +K H FF G+DW+ +  Q  TPP + P   S    P
Sbjct: 305 LKRHPFFNGVDWKNLRSQ--TPPKLAPDPASQTASP 338


>At5g04510.1 68418.m00451 3-phosphoinositide-dependent protein
           kinase, putative similar to 3-phosphoinositide-dependent
           protein kinase-1 [Oryza sativa] gi|5001830|gb|AAD37166
          Length = 491

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 16  MKEHVFFAGIDWQQVYHQKYTPPLIPPRGRSTPPMP 123
           +K H FF G+DW+ +  Q  TPP + P   S    P
Sbjct: 305 LKRHPFFNGVDWKNLRSQ--TPPKLAPDPASQTASP 338


>At2g44830.1 68415.m05582 protein kinase, putative similar to
           protein kinase PVPK-1 [Phaseolus vulgaris]
           SWISS-PROT:P15792
          Length = 765

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +1

Query: 16  MKEHVFFAGIDWQQVYHQKYTPPLIPPRGRSTPP 117
           +K+H FF G++W  +  +  TPP +P +  + PP
Sbjct: 691 IKQHPFFEGVNWALI--RCSTPPEVPRQMETEPP 722


>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
           extensin family protein similar to extensin-like protein
           [Lycopersicon esculentum] gi|5917664|gb|AAD55979;
           contains leucine-rich repeats, Pfam:PF00560; contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 727

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +1

Query: 73  YTPPLIPPRGRSTPPMPSTLEASTKKTPKE 162
           Y+PPL+PP+  S+PP  + + +   +TP +
Sbjct: 667 YSPPLLPPK-MSSPPTQTPVNSPPPRTPSQ 695


>At5g07670.1 68418.m00878 F-box family protein similar to unknown
           protein (pir||C71419) ; similar to SKP1 interacting
           partner 2 (SKIP2) TIGR_Ath1:At5g67250
          Length = 476

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +1

Query: 550 NDTKVVLTNTDEIGLKEWACRCVRLTNVPRTPCLD 654
           N  K+V+TNT E+GL   A  C RL  +    C D
Sbjct: 186 NLRKLVVTNTSELGLLNVAEECSRLQELELHKCSD 220


>At3g24080.1 68416.m03024 KRR1 family protein contains Pfam PF05178:
           Krr1 family
          Length = 638

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +2

Query: 275 DKLEQKRKAKQKQKFDADEKESDCILHGYIKKLGGPFASAWQTR--YAKLYPNRLEL 439
           ++ E + K K+K+K    +K  + ++  Y K          +TR  YAK+ PNR EL
Sbjct: 461 EEKEAEGKRKRKRKTSLVQKTKEALMEEYYKLDYEDTIGELRTRFKYAKVQPNRFEL 517


>At3g23310.1 68416.m02940 protein kinase, putative contains protein
           kinase domain, Pfam:PF00069
          Length = 568

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 8/19 (42%), Positives = 16/19 (84%)
 Frame = +1

Query: 16  MKEHVFFAGIDWQQVYHQK 72
           +KEH +F+G++W+++Y  K
Sbjct: 415 IKEHPWFSGVEWEKLYQMK 433


>At1g51170.1 68414.m05754 protein kinase family protein
          Length = 404

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 16  MKEHVFFAGIDWQQVYHQKYTPPLIPPR 99
           +KEH FF G+ W ++  +   PP IP R
Sbjct: 334 IKEHAFFKGVRW-ELLTEVLRPPFIPLR 360


>At4g26610.1 68417.m03835 protein kinase, putative similar to
           protein kinase G11A [Oryza sativa] SWISS-PROT:P47997
          Length = 506

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +1

Query: 16  MKEHVFFAGIDWQQVYHQKYTPPLIPP--RGRSTPPMPSTLEASTKKT 153
           MK+H FF G++W  V  +  +PP IP      S P  P+   +++ K+
Sbjct: 450 MKQHPFFEGVNWALV--RCASPPEIPKPVDYESAPATPAAATSTSVKS 495


>At1g30640.1 68414.m03747 protein kinase, putative contains protein
           kinase domain, Pfam:PF00069
          Length = 562

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
 Frame = +1

Query: 16  MKEHVFFAGIDWQQVYHQK--YTP----PLIPPRGRSTPPMPSTLEASTKKTP 156
           +K H +F G++W+++Y     Y P     L          +PST + S+K +P
Sbjct: 417 IKAHPWFRGVEWERLYESNAPYIPQVKHELDTQNFEKFDEVPSTCQTSSKSSP 469


>At4g35130.1 68417.m04994 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 804

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -3

Query: 274 GFQVDRMNTVSATSACQRSDITK-GKSLYC 188
           GF+ DR +T+SA  AC      K GK ++C
Sbjct: 226 GFKPDRFSTMSALGACSHVYSPKMGKEIHC 255


>At3g52190.1 68416.m05731 transducin family protein / WD-40 repeat
           family protein similar to St12p protein (GI:166878)
           {Arabidopsis thaliana}; contains Pfam profile: PF00400
           WD domain, G-beta repeat
          Length = 398

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 17/65 (26%), Positives = 30/65 (46%)
 Frame = +3

Query: 78  SATDTAAREVNAADAFDIGSFDEEDTKGIKLTETDQMQYKDFPLVISERWQAEVAETVFI 257
           ++TD +AR   A D F + + +    + I+L    +   K F    ++R    +   V+ 
Sbjct: 182 TSTDGSARIWKAEDGFPLSTLERSGDENIELCRFSKDGTKPFLFCAAQRGDTPMV-NVYD 240

Query: 258 RSTWK 272
            STWK
Sbjct: 241 ISTWK 245


>At3g25250.1 68416.m03154 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 421

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 16  MKEHVFFAGIDWQQVYHQKYTPPLIP 93
           +K H FF G+DW++V      PP IP
Sbjct: 323 IKGHDFFRGVDWEKVILVS-RPPYIP 347


>At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit A
           / V-ATPase A subunit / vacuolar proton pump alpha
           subunit / V-ATPase 69 kDa subunit identical to SP|O23654
           Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)
           (V-ATPase A subunit) (Vacuolar proton pump alpha
           subunit) (V-ATPase 69 kDa subunit) {Arabidopsis
           thaliana}
          Length = 623

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 317 FDADEKESDCILHGYIKKLGGPFASAWQTRYAKLY 421
           F+ DEKES+   +GY++K+ GP   A     A +Y
Sbjct: 12  FEDDEKESE---YGYVRKVSGPVVVADGMAGAAMY 43


>At1g76310.1 68414.m08864 cyclin, putative similar to B-like cyclin
           GI:780267 from (Medicago sativa); contains Pfam profiles
           PF00134: Cyclin, N-terminal domain, PF02984: Cyclin,
           C-terminal domain
          Length = 431

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = +2

Query: 410 AKLYPNRLELHLENSAKPEMILLDTVEEVSSD 505
           A+L  N L++H E + KP++I  + ++ + +D
Sbjct: 85  AQLAENNLQIHKEETKKPDLISNEALDRIITD 116


>At1g19370.1 68414.m02410 expressed protein
          Length = 605

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 24/94 (25%), Positives = 41/94 (43%)
 Frame = +2

Query: 251 IHTVNLEADKLEQKRKAKQKQKFDADEKESDCILHGYIKKLGGPFASAWQTRYAKLYPNR 430
           IH + L  D +  K + + K+KF  +E  +   + GY+  +      A+         N 
Sbjct: 345 IHVL-LHGDIMNFKCRVRSKKKFQMEEPVALQSIKGYLLVINEEKVFAF---------NV 394

Query: 431 LELHLENSAKPEMILLDTVEEVSSDFFPSRESSA 532
              H   +A P ++    +EE+ S F   RESS+
Sbjct: 395 STQHYVRTAGPRLLFSAGLEEIRSAFLSHRESSS 428


>At5g52440.1 68418.m06507 HCF106 protein identical to HCF106
           [Arabidopsis thaliana] GI:4894914; contains Pfam profile
           PF02416: mttA/Hcf106 family
          Length = 260

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +1

Query: 43  IDWQQVYHQKYTPPLIPPRGRSTPPMPSTLEASTKKTPKE 162
           I    VY+Q  T P+ PP     P +PST    T   P +
Sbjct: 151 ISTPNVYNQNRTNPVQPPPPPPPPSVPSTEAPVTANDPND 190


>At5g47750.1 68418.m05899 protein kinase, putative similar to
           protein kinase G11A [Oryza sativa] SWISS-PROT:P47997
          Length = 586

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 16  MKEHVFFAGIDWQQVYHQKYTPPLIPPRGRSTPPMPSTLEA-STKKT 153
           +K+H FF G++W  +  +  TPP IP          S  EA S++KT
Sbjct: 521 VKQHPFFEGVNWALI--RCATPPEIPKPVELEKGAVSVAEAPSSQKT 565


>At5g23770.1 68418.m02791 agenet domain-containing protein contains
           Pfam PF05641: Agenet domain
          Length = 438

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 79  PPLIPPRGRSTPPMPSTLEASTKK 150
           PPL PP G  TPP+   +EA T++
Sbjct: 185 PPLTPPPGIITPPL-KQIEAGTQR 207


>At2g26690.1 68415.m03201 nitrate transporter (NTP2) identical to
           nitrate transporter (ntp2) [Arabidopsis thaliana]
           GI:4490321
          Length = 577

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +3

Query: 144 EEDTKGIKLTETDQMQYKDFPLVISERWQAEVAETVFIRSTWK 272
           E++ +GI++  TDQ    D   +++E    +  + V I + WK
Sbjct: 274 EDNPEGIRIEHTDQFHLLDKAAIVAEGDFEQTLDGVAIPNPWK 316


>At1g79250.1 68414.m09239 protein kinase, putative similar to viroid
           symptom modulation protein/dual-specificity protein
           kinase [Lycopersicon esculentum] gi|7672777|gb|AAF66637
          Length = 555

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +1

Query: 16  MKEHVFFAGIDWQQVYHQKYTPPLIP 93
           +K+H FF G++W  +  +  TPP +P
Sbjct: 474 IKQHPFFEGVNWALI--RSATPPHVP 497


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,215,743
Number of Sequences: 28952
Number of extensions: 292093
Number of successful extensions: 1261
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1259
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1438152744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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