Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20725
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    26   0.26 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    25   0.46 
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    25   0.46 
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    25   0.46 
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    25   0.60 
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    24   1.1  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    23   1.8  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   2.4  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   2.4  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   2.4  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.4  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   2.4  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   2.4  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   2.4  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   2.4  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   2.4  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    23   3.2  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    23   3.2  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   7.4  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   7.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.8  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   9.8  

>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 210 VAIVTVPILHKIVATKHDNTDINRIIMDISINANTV 103
           VA+V+V        TK+DN D+N+I+    +  N V
Sbjct: 10  VAVVSVVFAADKYTTKYDNIDLNQILKSDRLLKNYV 45


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 515 QARRQDDTMYVEVGSEPPQPTIASLAAARSVTPDT 619
           Q RR      ++ G  PP+P  ASL+ + S +P +
Sbjct: 302 QNRRMKQKKRMKEGLIPPEPISASLSTSNSNSPSS 336


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 515 QARRQDDTMYVEVGSEPPQPTIASLAAARSVTPDT 619
           Q RR      ++ G  PP+P  ASL+ + S +P +
Sbjct: 91  QNRRMKQKKRMKEGLIPPEPISASLSTSNSNSPSS 125


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 515 QARRQDDTMYVEVGSEPPQPTIASLAAARSVTPDT 619
           Q RR      ++ G  PP+P  ASL+ + S +P +
Sbjct: 91  QNRRMKQKKRMKEGLIPPEPISASLSTSNSNSPSS 125


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 210 VAIVTVPILHKIVATKHDNTDINRIIMDISINANTV 103
           VA+++V        TK+DN D+N+I+    +  N V
Sbjct: 10  VAVLSVVFAADKYTTKYDNIDLNQILKSDRLLKNYV 45


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 462 ARDSRRPRTGAPEPPCLAGPQRGVHAHAAPGPS 364
           ARDSR+    +P     A      ++ AAPGPS
Sbjct: 99  ARDSRKGLFWSPAATAAATATEYKYSAAAPGPS 131


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = -1

Query: 204 IVTVPILHKIVATKHDNTDINRIIMDISINANTVKNTM 91
           +V V         K+DN D+++I+ +  +  N +K  M
Sbjct: 13  LVAVSAAENKYTNKYDNVDVDKILNNDRVLTNYIKCLM 50


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 423 PPCLAGPQRGVHAHAAPGPSSG 358
           PP +A PQ   H +AAP P  G
Sbjct: 45  PPQVA-PQYPQHPYAAPAPGHG 65


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 423 PPCLAGPQRGVHAHAAPGPSSG 358
           PP +A PQ   H +AAP P  G
Sbjct: 45  PPQVA-PQYPQHPYAAPAPGHG 65


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 423 PPCLAGPQRGVHAHAAPGPSSG 358
           PP +A PQ   H +AAP P  G
Sbjct: 45  PPQVA-PQYPQHPYAAPAPGHG 65


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 145 NIRVVVFCGNDFVQNWYCDN 204
           N   ++F  +DF Q + CDN
Sbjct: 70  NFWTILFSRSDFFQQFECDN 89


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 423 PPCLAGPQRGVHAHAAPGPSSG 358
           PP +A PQ   H +AAP P  G
Sbjct: 45  PPQVA-PQYPQHPYAAPAPGHG 65


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 423 PPCLAGPQRGVHAHAAPGPSSG 358
           PP +A PQ   H +AAP P  G
Sbjct: 45  PPQVA-PQYPQHPYAAPAPGHG 65


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 423 PPCLAGPQRGVHAHAAPGPSSG 358
           PP +A PQ   H +AAP P  G
Sbjct: 45  PPQVA-PQYPQHPYAAPAPGHG 65


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 423 PPCLAGPQRGVHAHAAPGPSSG 358
           PP +A PQ   H +AAP P  G
Sbjct: 45  PPQVA-PQYPQHPYAAPAPGHG 65


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 423 PPCLAGPQRGVHAHAAPGPSSG 358
           PP +A PQ   H +AAP P  G
Sbjct: 45  PPQVA-PQYPQHPYAAPAPGHG 65


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 219 LKLVAIVTVPILHKIVATKHDNTDINRII 133
           L ++    V   + +  TK+DN DI+ I+
Sbjct: 6   LAVLIATAVAATYDVYPTKYDNVDIDAIL 34


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 219 LKLVAIVTVPILHKIVATKHDNTDINRII 133
           L ++    V   + +  TK+DN DI+ I+
Sbjct: 6   LAVLIATAVAATYDVYPTKYDNVDIDAIL 34


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +2

Query: 347 HPHSPLDGPGAACAWTPRWGP 409
           H H  L   G  C W+ + GP
Sbjct: 499 HGHQELVLGGEVCLWSEQVGP 519


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -1

Query: 213 LVAIVTVPILHKIVATKHDNTDINRIIMDISINANTV 103
           ++AI +    +    TK+DN D++ II    +  N V
Sbjct: 11  VIAIASSLAENSKYTTKYDNVDLDEIIKSDRLLKNYV 47


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 201 QWPLTSNLNRKL 236
           +WPL S +NR L
Sbjct: 527 KWPLLSTINRHL 538


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 389 WTPRWGPARHGGSGAPVRGRRLSL 460
           W+ R   A H GS    RGR ++L
Sbjct: 311 WSDRIYAAIHQGSVTDERGRSITL 334


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,361
Number of Sequences: 336
Number of extensions: 3434
Number of successful extensions: 31
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)