Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20724
         (756 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   4.6  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   4.6  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   4.6  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   4.6  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   6.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   6.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   6.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   6.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   6.1  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   8.0  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 423 RHHIRVINRHAHYFSNSIRLQ 361
           RHH  V + H H+F +  + Q
Sbjct: 117 RHHEEVADGHQHHFLHENKYQ 137


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 393 AHYFSNSIRLQF 358
           AHY SN +R+QF
Sbjct: 339 AHYASNCLRVQF 350


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 423 RHHIRVINRHAHYFSNSIRLQ 361
           RHH  V + H H+F +  + Q
Sbjct: 117 RHHEEVADGHQHHFLHENKYQ 137


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 423 RHHIRVINRHAHYFSNSIRLQ 361
           RHH  V + H H+F +  + Q
Sbjct: 117 RHHEEVADGHQHHFLHENKYQ 137


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = +1

Query: 403 NDPYVMAAWGAQHNTKGKVRMLADPS-GNFIKALDLAPI 516
           N PY        H   G + +LADPS   F + + LA +
Sbjct: 348 NTPYHTPEPDCIHELLGHMPLLADPSFAQFSQEIGLASL 386


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 427  KPPSHTGH*QTRT 389
            +PPS T H QT+T
Sbjct: 1175 RPPSTTNHWQTKT 1187


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 191  VGDQLPAADLFEDSPANK 244
            V   +PA D+FE+   NK
Sbjct: 1510 VASSIPAKDVFENGHVNK 1527


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 191  VGDQLPAADLFEDSPANK 244
            V   +PA D+FE+   NK
Sbjct: 1510 VASSIPAKDVFENGHVNK 1527


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 191  VGDQLPAADLFEDSPANK 244
            V   +PA D+FE+   NK
Sbjct: 1510 VASSIPAKDVFENGHVNK 1527


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 191  VGDQLPAADLFEDSPANK 244
            V   +PA D+FE+   NK
Sbjct: 1510 VASSIPAKDVFENGHVNK 1527


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +1

Query: 298 GAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVND 408
           G F  G   T   GY  +  K K  G   IV +S++D
Sbjct: 383 GGFWVGYEDTDTAGYKASYVKAKGLGGIAIVDLSLDD 419


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,256
Number of Sequences: 336
Number of extensions: 4147
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)