Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20724
         (756 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr...    31   0.67 
AF125448-5|AAD12810.1|  188|Caenorhabditis elegans Hypothetical ...    30   1.5  
AC006663-5|AAY43999.1|  490|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z81473-8|CAB03899.2|  418|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z81473-4|CAB03891.1|  463|Caenorhabditis elegans Hypothetical pr...    29   3.6  
AL031636-1|CAA21046.2|  418|Caenorhabditis elegans Hypothetical ...    29   3.6  
U42848-2|AAA83608.2|  315|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z81041-14|CAN99675.1|  684|Caenorhabditis elegans Hypothetical p...    28   6.2  
Z81041-13|CAN99674.1|  647|Caenorhabditis elegans Hypothetical p...    28   6.2  
Z81041-5|CAB02790.1|  715|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z81041-3|CAB02791.1|  713|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U58748-10|AAB52970.2|  701|Caenorhabditis elegans Hypothetical p...    28   6.2  
AF003740-5|AAL08031.1|  195|Caenorhabditis elegans Hypothetical ...    28   6.2  

>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
            F47A4.2 protein.
          Length = 3498

 Score = 31.5 bits (68), Expect = 0.67
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 420  GGLGSSAQHQRKGAYASRSQRQLHQGSGPGTNLPP 524
            GG+G   Q  ++      SQ+Q  +G  PG  LPP
Sbjct: 3331 GGIGQQGQQSQQPQQPQVSQQQNQRGMNPGAQLPP 3365


>AF125448-5|AAD12810.1|  188|Caenorhabditis elegans Hypothetical
           protein H14E04.3 protein.
          Length = 188

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
 Frame = -1

Query: 390 HYFSNSIRLQFICVLYVSRQVCFRTSRGEGARHRK*YNL-LSRRQLKIFTLLAGE 229
           H+F+  I L FICV  VS +   RT+R  G +++K  +  + ++Q ++  +  G+
Sbjct: 129 HFFNIPISLYFICVFLVSSKTHKRTTR-SGRKNKKIEDKNVIKKQFEVSNVFVGD 182


>AC006663-5|AAY43999.1|  490|Caenorhabditis elegans Hypothetical
           protein H24K24.2 protein.
          Length = 490

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
 Frame = +2

Query: 89  FLTGSSIIRGITAFANRASARALHISQLSMA-------PIKVGDQLPAADLF 223
           F+ G  I+R + +F N  S   LH  +++M        P K+ + LPA   F
Sbjct: 79  FMNGYDIVRFLESFLNEESRNVLHSLEITMESPFAKEWPAKINNMLPALKCF 130


>Z81473-8|CAB03899.2|  418|Caenorhabditis elegans Hypothetical
           protein Y47H9A.1 protein.
          Length = 418

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +3

Query: 489 HQGSGPGTNLPPLGGFRSKRFSMVIVDSKVQDLNVEPDGT 608
           HQGSGP   L P  G  S +F    +++     + +PDG+
Sbjct: 247 HQGSGPAFALTPKTGENSAKFKYNFINNSYS--HTQPDGS 284


>Z81473-4|CAB03891.1|  463|Caenorhabditis elegans Hypothetical
           protein C17D12.3 protein.
          Length = 463

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +3

Query: 489 HQGSGPGTNLPPLGGFRSKRFSMVIVDSKVQDLNVEPDGT 608
           HQGSGP   L P  G  S +F    +++     + +PDG+
Sbjct: 247 HQGSGPAFALTPKTGENSAKFKYNFINNSYS--HTQPDGS 284


>AL031636-1|CAA21046.2|  418|Caenorhabditis elegans Hypothetical
           protein Y47H9A.1 protein.
          Length = 418

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +3

Query: 489 HQGSGPGTNLPPLGGFRSKRFSMVIVDSKVQDLNVEPDGT 608
           HQGSGP   L P  G  S +F    +++     + +PDG+
Sbjct: 247 HQGSGPAFALTPKTGENSAKFKYNFINNSYS--HTQPDGS 284


>U42848-2|AAA83608.2|  315|Caenorhabditis elegans Hypothetical
           protein C31H1.5 protein.
          Length = 315

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = -2

Query: 371 SDFSLSAFCTYPGKCVLEHPGVKAPGTANNTTFFPAVN 258
           +DF   A C+   K   EH G + P     T F PA N
Sbjct: 113 ADFVTDAACSLVRKFGHEHYGTRTPDNRELTAFHPATN 150


>U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical protein
            F28B4.3 protein.
          Length = 2229

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = +2

Query: 419  WRLGELSTTPKERCVC*PIPAATSSRLWTWHQSAAARRFPLQK 547
            W  GE S  P  +CV     +   S++WT    A  R F  QK
Sbjct: 1272 WANGEPSNDPTRQCVYFDGRSGDKSKVWTTDTCATPRPFICQK 1314


>Z81041-14|CAN99675.1|  684|Caenorhabditis elegans Hypothetical
           protein C27A7.5e protein.
          Length = 684

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = +2

Query: 98  GSSIIRGITAFANRASARALHISQLSMAPIKVGDQLPAADLFEDSPANKVNIL 256
           G  ++ G    A  ASA +  +  L    I  G Q+P A++  D   N +  L
Sbjct: 195 GFVVLHGTDTLAYTASALSFMMENLGKPVIITGSQIPVAEVRSDGMENLIGAL 247


>Z81041-13|CAN99674.1|  647|Caenorhabditis elegans Hypothetical
           protein C27A7.5d protein.
          Length = 647

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = +2

Query: 98  GSSIIRGITAFANRASARALHISQLSMAPIKVGDQLPAADLFEDSPANKVNIL 256
           G  ++ G    A  ASA +  +  L    I  G Q+P A++  D   N +  L
Sbjct: 158 GFVVLHGTDTLAYTASALSFMMENLGKPVIITGSQIPVAEVRSDGMENLIGAL 210


>Z81041-5|CAB02790.1|  715|Caenorhabditis elegans Hypothetical
           protein C27A7.5c protein.
          Length = 715

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = +2

Query: 98  GSSIIRGITAFANRASARALHISQLSMAPIKVGDQLPAADLFEDSPANKVNIL 256
           G  ++ G    A  ASA +  +  L    I  G Q+P A++  D   N +  L
Sbjct: 226 GFVVLHGTDTLAYTASALSFMMENLGKPVIITGSQIPVAEVRSDGMENLIGAL 278


>Z81041-3|CAB02791.1|  713|Caenorhabditis elegans Hypothetical
           protein C27A7.5a protein.
          Length = 713

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = +2

Query: 98  GSSIIRGITAFANRASARALHISQLSMAPIKVGDQLPAADLFEDSPANKVNIL 256
           G  ++ G    A  ASA +  +  L    I  G Q+P A++  D   N +  L
Sbjct: 224 GFVVLHGTDTLAYTASALSFMMENLGKPVIITGSQIPVAEVRSDGMENLIGAL 276


>U58748-10|AAB52970.2|  701|Caenorhabditis elegans Hypothetical
           protein ZK180.6 protein.
          Length = 701

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -3

Query: 379 QLHPTSVYLRSVRIP-ASVF*NIPG*RRPAPQIIQPSFPPS 260
           Q   T+ Y + V +  A+ F  +P   RPAPQ +QPSF P+
Sbjct: 274 QTFETTPYPKQVAVETAAPF--VPQPVRPAPQPVQPSFQPA 312


>AF003740-5|AAL08031.1|  195|Caenorhabditis elegans Hypothetical
           protein C41D11.9 protein.
          Length = 195

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 416 TYGSLTDTHTISATPSDFSLSAFCTYPGKC 327
           T GS++ T  + +   D S    CT+PG C
Sbjct: 17  TIGSISGTKDVKSKNCDGSAGLTCTFPGDC 46


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,485,633
Number of Sequences: 27780
Number of extensions: 399711
Number of successful extensions: 961
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)