Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20723
         (743 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK124538-1|BAC85878.1|  256|Homo sapiens protein ( Homo sapiens ...    32   1.9  
AK027561-1|BAB55198.1|  819|Homo sapiens protein ( Homo sapiens ...    32   2.5  
AB037837-1|BAA92654.1| 1967|Homo sapiens KIAA1416 protein protein.     32   2.5  
BC110537-1|AAI10538.1|  819|Homo sapiens IWS1 homolog (S. cerevi...    31   5.8  
BC110536-1|AAI10537.1|  819|Homo sapiens IWS1 homolog (S. cerevi...    31   5.8  
BC065279-1|AAH65279.1|  375|Homo sapiens IWS1 protein protein.         31   5.8  

>AK124538-1|BAC85878.1|  256|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42547 fis, clone BRACE3004880. ).
          Length = 256

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
 Frame = -2

Query: 232 LISSTITLTGMSMTSFLFARRLLSMSLMVLAWS---MSSCSLDKLSTTFKGLSSASGTLS 62
           L S T++  G+S T+ LFA RL S+++   + S   +S+C L +++ +  GLSS + +  
Sbjct: 118 LSSMTLSACGLSSTT-LFACRLSSVTVSTCSLSSVTLSACGLSRVTLSACGLSSMTPSAC 176

Query: 61  GM 56
           G+
Sbjct: 177 GL 178


>AK027561-1|BAB55198.1|  819|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14655 fis, clone NT2RP2002292. ).
          Length = 819

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +2

Query: 167 QPPREQKXXXXXXXXXXXXXNQTVVEE*FKNVEVPDENEEIKRPLV-DLRNPGPPQHQEH 343
           +PP+ +              + +  EE  ++     ENEE+ RP + D  +  PP+HQ  
Sbjct: 202 EPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENEELPRPRISDSESEDPPRHQAS 261

Query: 344 ETQNPE 361
           +++N E
Sbjct: 262 DSENEE 267


>AB037837-1|BAA92654.1| 1967|Homo sapiens KIAA1416 protein protein.
          Length = 1967

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 15/59 (25%), Positives = 28/59 (47%)
 Frame = +2

Query: 281  EEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSD 457
            EE + P    +  G  + +E +    E  ++ E   SSVKN++   E+    G + +S+
Sbjct: 1414 EEPENPAAKEKCEGKEEEEETDGSGKESKQECEAEASSVKNELKGVEVGADTGSKSISE 1472


>BC110537-1|AAI10538.1|  819|Homo sapiens IWS1 homolog (S.
           cerevisiae) protein.
          Length = 819

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +2

Query: 167 QPPREQKXXXXXXXXXXXXXNQTVVEE*FKNVEVPDENEEIKRPLV-DLRNPGPPQHQEH 343
           +PP+ +              + +  EE  ++     ENEE+ +P + D  +  PP+HQ  
Sbjct: 202 EPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENEELPKPRISDSESEDPPRHQAS 261

Query: 344 ETQNPE 361
           +++N E
Sbjct: 262 DSENEE 267


>BC110536-1|AAI10537.1|  819|Homo sapiens IWS1 homolog (S.
           cerevisiae) protein.
          Length = 819

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +2

Query: 167 QPPREQKXXXXXXXXXXXXXNQTVVEE*FKNVEVPDENEEIKRPLV-DLRNPGPPQHQEH 343
           +PP+ +              + +  EE  ++     ENEE+ +P + D  +  PP+HQ  
Sbjct: 202 EPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENEELPKPRISDSESEDPPRHQAS 261

Query: 344 ETQNPE 361
           +++N E
Sbjct: 262 DSENEE 267


>BC065279-1|AAH65279.1|  375|Homo sapiens IWS1 protein protein.
          Length = 375

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +2

Query: 167 QPPREQKXXXXXXXXXXXXXNQTVVEE*FKNVEVPDENEEIKRPLV-DLRNPGPPQHQEH 343
           +PP+ +              + +  EE  ++     ENEE+ +P + D  +  PP+HQ  
Sbjct: 202 EPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENEELPKPRISDSESEDPPRHQAS 261

Query: 344 ETQNPE 361
           +++N E
Sbjct: 262 DSENEE 267


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,523,516
Number of Sequences: 237096
Number of extensions: 1817431
Number of successful extensions: 5811
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5801
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)