Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20723
         (743 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71180-3|CAA94892.2|  763|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z66522-7|CAA91409.2|  472|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z66520-13|CAA91392.2|  472|Caenorhabditis elegans Hypothetical p...    29   2.6  
AL021474-7|CAA16311.2|  763|Caenorhabditis elegans Hypothetical ...    29   2.6  
Z70306-3|CAA94325.1|  318|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z83223-4|CAB05716.2|  534|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z68132-2|CAA92220.2|  762|Caenorhabditis elegans Hypothetical pr...    28   6.1  
AL117193-1|CAB54981.1|  767|Caenorhabditis elegans Hypothetical ...    28   6.1  
AF067624-4|AAM15592.1|  644|Caenorhabditis elegans Hypothetical ...    28   8.0  
AF067624-3|AAM81100.2|  678|Caenorhabditis elegans Hypothetical ...    28   8.0  
AF067624-2|AAC17562.3|  634|Caenorhabditis elegans Hypothetical ...    28   8.0  
AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical ...    28   8.0  

>Z71180-3|CAA94892.2|  763|Caenorhabditis elegans Hypothetical
           protein F22E12.1 protein.
          Length = 763

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +2

Query: 275 ENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQ 436
           E    +RP V +  P PP  Q   + N  +H +   +V+  K+ ++  E ALR+
Sbjct: 373 EQARYQRPPVQMPPPPPPPQQNSPSVNENYHPE---LVNQFKSHLDEHEKALRR 423


>Z66522-7|CAA91409.2|  472|Caenorhabditis elegans Hypothetical
           protein F14E5.1 protein.
          Length = 472

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 19/69 (27%), Positives = 33/69 (47%)
 Frame = -2

Query: 265 FNVFKSLFNDGLISSTITLTGMSMTSFLFARRLLSMSLMVLAWSMSSCSLDKLSTTFKGL 86
           F   K LF +  +   + L+  ++T+ +    LL  S   L  +     + + STT  GL
Sbjct: 257 FQKMKELFTERHLRMALILSVSALTNTVGLWALLLSSTFFLENANVESEIAEWSTTAMGL 316

Query: 85  SSASGTLSG 59
           +  SGT++G
Sbjct: 317 AYVSGTITG 325


>Z66520-13|CAA91392.2|  472|Caenorhabditis elegans Hypothetical
           protein F14E5.1 protein.
          Length = 472

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 19/69 (27%), Positives = 33/69 (47%)
 Frame = -2

Query: 265 FNVFKSLFNDGLISSTITLTGMSMTSFLFARRLLSMSLMVLAWSMSSCSLDKLSTTFKGL 86
           F   K LF +  +   + L+  ++T+ +    LL  S   L  +     + + STT  GL
Sbjct: 257 FQKMKELFTERHLRMALILSVSALTNTVGLWALLLSSTFFLENANVESEIAEWSTTAMGL 316

Query: 85  SSASGTLSG 59
           +  SGT++G
Sbjct: 317 AYVSGTITG 325


>AL021474-7|CAA16311.2|  763|Caenorhabditis elegans Hypothetical
           protein F22E12.1 protein.
          Length = 763

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +2

Query: 275 ENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQ 436
           E    +RP V +  P PP  Q   + N  +H +   +V+  K+ ++  E ALR+
Sbjct: 373 EQARYQRPPVQMPPPPPPPQQNSPSVNENYHPE---LVNQFKSHLDEHEKALRR 423


>Z70306-3|CAA94325.1|  318|Caenorhabditis elegans Hypothetical
           protein C06G8.4 protein.
          Length = 318

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = -2

Query: 286 FLIFIRHFNVFKSLFNDGLISSTITLT--GMSMTSFLFARRLLSMSLMVLAWSMSSCSL 116
           FL ++  F   K++    L+   ITLT  G  +T FL  +R++     +L  S   CSL
Sbjct: 25  FLCYLAIFQSPKAIRTYSLVLINITLTNVGACVTGFLLDQRIIQSGKSMLYVSYGYCSL 83


>Z83223-4|CAB05716.2|  534|Caenorhabditis elegans Hypothetical
           protein E01G4.4 protein.
          Length = 534

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 320 GPPQHQEHETQNPEHHEDAEKIVSSVKN 403
           GPP HQ+H  Q  +H+  A    SS  N
Sbjct: 133 GPPVHQQHYQQQQQHYGAATSAPSSSYN 160


>Z68132-2|CAA92220.2|  762|Caenorhabditis elegans Hypothetical
           protein F09C8.2 protein.
          Length = 762

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 275 ENEEIKRPLVDLRNPGPPQHQEHETQNPE 361
           EN+  +   V+ + P P QHQ+ + Q PE
Sbjct: 404 ENQRYEGNFVEYQPPPPQQHQQQQPQAPE 432


>AL117193-1|CAB54981.1|  767|Caenorhabditis elegans Hypothetical
           protein Y105C5A.1 protein.
          Length = 767

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +1

Query: 592 IAAPSVEETQNKASFETIESGLKSLETNFNSGLNQLSEG 708
           +  PS + T+NK     I+   + L +NFN+G+  +S G
Sbjct: 215 VVLPSRKSTRNKKDMNQIKED-EELVSNFNNGIGVISRG 252


>AF067624-4|AAM15592.1|  644|Caenorhabditis elegans Hypothetical
           protein M01B12.4b protein.
          Length = 644

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
 Frame = +2

Query: 233 TVVEE*FKNVEVPDENEEIKRPLVDLRNPGP----PQHQEHETQNPEHHEDAEKIVSSVK 400
           TV+EE    V V  E  EI+ P      P P    P+ +E +      HED  +  S ++
Sbjct: 359 TVIEEHHNEVTVAPEAPEIQEPSEPATEPIPEPNEPKDEEIQRNEEMFHEDTSE--SHLE 416

Query: 401 NDINTA 418
           +  NT+
Sbjct: 417 SSTNTS 422


>AF067624-3|AAM81100.2|  678|Caenorhabditis elegans Hypothetical
           protein M01B12.4c protein.
          Length = 678

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
 Frame = +2

Query: 233 TVVEE*FKNVEVPDENEEIKRPLVDLRNPGP----PQHQEHETQNPEHHEDAEKIVSSVK 400
           TV+EE    V V  E  EI+ P      P P    P+ +E +      HED  +  S ++
Sbjct: 349 TVIEEHHNEVTVAPEAPEIQEPSEPATEPIPEPNEPKDEEIQRNEEMFHEDTSE--SHLE 406

Query: 401 NDINTA 418
           +  NT+
Sbjct: 407 SSTNTS 412


>AF067624-2|AAC17562.3|  634|Caenorhabditis elegans Hypothetical
           protein M01B12.4a protein.
          Length = 634

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
 Frame = +2

Query: 233 TVVEE*FKNVEVPDENEEIKRPLVDLRNPGP----PQHQEHETQNPEHHEDAEKIVSSVK 400
           TV+EE    V V  E  EI+ P      P P    P+ +E +      HED  +  S ++
Sbjct: 349 TVIEEHHNEVTVAPEAPEIQEPSEPATEPIPEPNEPKDEEIQRNEEMFHEDTSE--SHLE 406

Query: 401 NDINTA 418
           +  NT+
Sbjct: 407 SSTNTS 412


>AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical
           protein R10F2.6 protein.
          Length = 1150

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 20/68 (29%), Positives = 33/68 (48%)
 Frame = +2

Query: 329 QHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQA 508
           +HQ+HE Q  +  E+AEK +  +K D+   EI  +     V + + K   R E      A
Sbjct: 567 EHQKHEDQT-DKSEEAEKKM-KIKADLAAKEIWDKNMEHNVDEILMKRVNRVEMCRIQMA 624

Query: 509 ACNISKKI 532
             N+ +K+
Sbjct: 625 LQNLDQKL 632


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,828,609
Number of Sequences: 27780
Number of extensions: 295534
Number of successful extensions: 1393
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1392
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)