SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20722
         (757 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr...    34   0.095
AC024877-12|AAF60902.1|  128|Caenorhabditis elegans Hypothetical...    32   0.38 
Z99279-6|CAB16498.1|  640|Caenorhabditis elegans Hypothetical pr...    31   0.67 
Z82284-8|CAB05294.1|  640|Caenorhabditis elegans Hypothetical pr...    31   0.67 
Z77662-15|CAI79240.1|  255|Caenorhabditis elegans Hypothetical p...    31   0.67 
U23181-6|AAC48204.1|  801|Caenorhabditis elegans Hypothetical pr...    31   0.67 
Z77136-8|CAB00885.2|  278|Caenorhabditis elegans Hypothetical pr...    31   1.2  
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ...    31   1.2  
Z73102-6|CAA97412.1|  522|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AF047661-4|AAC04435.2|  931|Caenorhabditis elegans Hypothetical ...    30   1.5  
U00025-4|AAN65312.1|  606|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U00025-3|AAA50619.1|  804|Caenorhabditis elegans Hypothetical pr...    30   2.0  
AB110824-1|BAD80739.1|  606|Caenorhabditis elegans chondroitin p...    30   2.0  
AB110823-1|BAD80738.1|  804|Caenorhabditis elegans chondroitin p...    30   2.0  
U41992-7|AAA83358.1|  374|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AY818713-1|AAX35669.1|  691|Caenorhabditis elegans LIN-65S protein.    29   2.7  
AY818712-1|AAX35668.1|  728|Caenorhabditis elegans LIN-65L protein.    29   2.7  
AC025726-22|AAN73851.2|  512|Caenorhabditis elegans Abnormal cel...    29   2.7  
AC025726-21|AAK73935.3|  728|Caenorhabditis elegans Abnormal cel...    29   2.7  
AC024807-1|AAF59529.5|  704|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z50874-10|CAA90770.1|  302|Caenorhabditis elegans Hypothetical p...    29   3.6  
U21310-2|AAA62521.1|  322|Caenorhabditis elegans T box family pr...    29   3.6  
AF078790-10|AAC26931.1|  197|Caenorhabditis elegans Hypothetical...    29   3.6  
Z96102-2|CAI79216.1|  746|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical...    28   6.2  
AC006645-9|AAF39841.2|  293|Caenorhabditis elegans Nematode asta...    28   6.2  
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a...    28   8.2  

>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
           protein F35A5.1 protein.
          Length = 1274

 Score = 34.3 bits (75), Expect = 0.095
 Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
 Frame = +1

Query: 517 EEKPSATDAEGSADS----AAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADN 684
           ++ P+  D+E +AD     ++  P + KK  + P   S   A+P    P+    P +   
Sbjct: 701 KKAPTKPDSEAAADPVSGPSSKDPKLAKKAPVKPRDPSPMKAVPIKPAPKTEVPPAVVKK 760

Query: 685 PVDEDKPADISPDAPKAEAKS 747
           P    K  D SP   KAE  S
Sbjct: 761 PEPVAKSRDPSPKKAKAEPNS 781


>AC024877-12|AAF60902.1|  128|Caenorhabditis elegans Hypothetical
           protein Y95B8A.2 protein.
          Length = 128

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +1

Query: 643 KTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSA 750
           K   AA  P+ A  P +ED   DI   APKA+A++A
Sbjct: 71  KPAPAAAGPRSAPAPTNEDYNTDIDVPAPKAKARAA 106


>Z99279-6|CAB16498.1|  640|Caenorhabditis elegans Hypothetical
           protein Y57G11A.2 protein.
          Length = 640

 Score = 31.5 bits (68), Expect = 0.67
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 251 EEAEPAPVSNDEVPAIPEAKKDDIAPEDSDI 343
           E+  P P   +E+P +PE  ++   P DS+I
Sbjct: 532 EDTTPGPAVTEEIPEVPEPTEEPPTPTDSEI 562


>Z82284-8|CAB05294.1|  640|Caenorhabditis elegans Hypothetical
           protein Y57G11A.2 protein.
          Length = 640

 Score = 31.5 bits (68), Expect = 0.67
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 251 EEAEPAPVSNDEVPAIPEAKKDDIAPEDSDI 343
           E+  P P   +E+P +PE  ++   P DS+I
Sbjct: 532 EDTTPGPAVTEEIPEVPEPTEEPPTPTDSEI 562


>Z77662-15|CAI79240.1|  255|Caenorhabditis elegans Hypothetical
           protein F47B8.14 protein.
          Length = 255

 Score = 31.5 bits (68), Expect = 0.67
 Identities = 19/50 (38%), Positives = 23/50 (46%)
 Frame = +1

Query: 601 APTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSA 750
           AP   ++ A+ P    PEAA AP+    P  E  PA     AP A A  A
Sbjct: 101 APAAPAEPASAPA-PAPEAAPAPEPTPAPAPEAAPAPAPDAAPTAPAAGA 149


>U23181-6|AAC48204.1|  801|Caenorhabditis elegans Hypothetical
           protein ZK84.1 protein.
          Length = 801

 Score = 31.5 bits (68), Expect = 0.67
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +1

Query: 535 TDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAP-KLADNPVDEDKPAD 711
           TD+  SAD+ A + +       A + E+ A  I   +T  A   P  +AD     D P+ 
Sbjct: 334 TDSAASADTTAALVDTSSSEHAAESTEAPATDIAATETTPAPSVPAPVADAAAGYDSPSS 393

Query: 712 ISPDAPKAEAK 744
           I  + P   A+
Sbjct: 394 IPEETPAPAAE 404



 Score = 27.9 bits (59), Expect = 8.2
 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
 Frame = +1

Query: 520 EKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADA-PKLADN--PV 690
           + PS+   E  A +A   P        A    + A A  E   PE A A P  A    P 
Sbjct: 389 DSPSSIPEETPAPAAEDTPAPASAA--AEETPAPAPAAEETPAPETASAAPDAAGGAAPA 446

Query: 691 DEDKPADISPDAPK-AEAKSA 750
           D   PAD++  AP+ + A+SA
Sbjct: 447 DVAAPADVATTAPETSSAQSA 467


>Z77136-8|CAB00885.2|  278|Caenorhabditis elegans Hypothetical
           protein ZC376.8 protein.
          Length = 278

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
 Frame = +1

Query: 574 PNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVD-EDKPADISPDAPKAEAKS 747
           P   K +  AP+ ES     P  K PE   AP  AD     E+K  +  P+ P    KS
Sbjct: 37  PKKKKDVSGAPSAESPPPPPPAPKVPEPPKAPPPADAVKKIEEKGEEKKPEEPAKSKKS 95


>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
            protein Y38C9A.1 protein.
          Length = 1484

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +1

Query: 529  SATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAP-KLADNPVDEDKP 705
            +A   +  A S++I PN    I  AP+    +AA P+I  P A  AP   +    D+D+ 
Sbjct: 1062 TAPTVQAPAPSSSI-PNTSTSIPKAPSAPVLSAAPPKIVAPAAPAAPTHYSPISSDDDEI 1120

Query: 706  ADISPDAPKAEAKSA 750
              I P   K  A SA
Sbjct: 1121 QCIEPPPAKKPAPSA 1135


>Z73102-6|CAA97412.1|  522|Caenorhabditis elegans Hypothetical
           protein B0035.5 protein.
          Length = 522

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = +1

Query: 520 EKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADN-PVDE 696
           EKP++ +AE   D    +    K ++L   V     A PE   PEA+   K   + P D 
Sbjct: 280 EKPASLNAEDIRDEKVKVLKAAKVVELKDVVVGQYIASPEFDHPEASQGYKDDKSVPADS 339

Query: 697 DKP 705
             P
Sbjct: 340 TTP 342


>AF047661-4|AAC04435.2|  931|Caenorhabditis elegans Hypothetical
           protein M70.1 protein.
          Length = 931

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +1

Query: 586 KKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAE 738
           KK D  P+       +P   TP+ A  P     P  ++KP D++    + E
Sbjct: 812 KKKDTKPSAPKPKPDVPVNPTPQTAKVPVAPAPPAKDEKPKDVNVKKAETE 862


>U00025-4|AAN65312.1|  606|Caenorhabditis elegans Hypothetical
           protein PAR2.4b protein.
          Length = 606

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +3

Query: 129 VSLAMPVAEEKDVVPAQPILEVAPKIDDSVKPTEVAAAT 245
           V++ +PVA EKDV+PA+ +L    ++   + PTE A  T
Sbjct: 317 VTVVIPVASEKDVLPARKLLARQARL--CLFPTEEARKT 353


>U00025-3|AAA50619.1|  804|Caenorhabditis elegans Hypothetical
           protein PAR2.4a protein.
          Length = 804

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +3

Query: 129 VSLAMPVAEEKDVVPAQPILEVAPKIDDSVKPTEVAAAT 245
           V++ +PVA EKDV+PA+ +L    ++   + PTE A  T
Sbjct: 515 VTVVIPVASEKDVLPARKLLARQARL--CLFPTEEARKT 551


>AB110824-1|BAD80739.1|  606|Caenorhabditis elegans chondroitin
           polymerizing factor-S protein.
          Length = 606

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +3

Query: 129 VSLAMPVAEEKDVVPAQPILEVAPKIDDSVKPTEVAAAT 245
           V++ +PVA EKDV+PA+ +L    ++   + PTE A  T
Sbjct: 317 VTVVIPVASEKDVLPARKLLARQARL--CLFPTEEARKT 353


>AB110823-1|BAD80738.1|  804|Caenorhabditis elegans chondroitin
           polymerizing factor protein.
          Length = 804

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +3

Query: 129 VSLAMPVAEEKDVVPAQPILEVAPKIDDSVKPTEVAAAT 245
           V++ +PVA EKDV+PA+ +L    ++   + PTE A  T
Sbjct: 515 VTVVIPVASEKDVLPARKLLARQARL--CLFPTEEARKT 551


>U41992-7|AAA83358.1|  374|Caenorhabditis elegans Hypothetical
           protein F32E10.6 protein.
          Length = 374

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 21/79 (26%), Positives = 32/79 (40%)
 Frame = +1

Query: 511 SKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPV 690
           SK  K +A+D +   +  A   +   K    P  E D      +KTP+     K A+ P 
Sbjct: 218 SKSTKRAASDDDEEEEPVATKKSKKSKRAETPEEEDDEEE-EVVKTPKKTKKSKRAETPE 276

Query: 691 DEDKPADISPDAPKAEAKS 747
           +ED+  +     PK    S
Sbjct: 277 EEDEVEEEVVKTPKKSKSS 295



 Score = 27.9 bits (59), Expect = 8.2
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
 Frame = +1

Query: 511 SKEEKPSATDAEGSADSAAII--PNMVKKIDLAPTVESDAAAIPEI-KTPE---AADAPK 672
           SK+ K + T  E   +   ++  P   KK   A T E +     E+ KTP+   ++ +PK
Sbjct: 240 SKKSKRAETPEEEDDEEEEVVKTPKKTKKSKRAETPEEEDEVEEEVVKTPKKSKSSKSPK 299

Query: 673 L---ADNPVDEDKPADISPDAPKAEAK 744
               A+   +ED+  +   +APK+  K
Sbjct: 300 KSKRAETSDEEDEDEEDEKEAPKSSKK 326


>AY818713-1|AAX35669.1|  691|Caenorhabditis elegans LIN-65S protein.
          Length = 691

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
 Frame = +1

Query: 517 EEKPSATDA-EGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNP-- 687
           E++   TD  E   + AA  P        AP  E+  A+ P+ + PE  D P  +  P  
Sbjct: 34  EDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEAPEVQDVPDSSGAPDA 93

Query: 688 -VDEDKPADIS-PDAP-KAEAKSADD 756
                + +D S P+ P   EA+ A D
Sbjct: 94  SAQASEASDASAPEVPGSTEAQDAQD 119


>AY818712-1|AAX35668.1|  728|Caenorhabditis elegans LIN-65L protein.
          Length = 728

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
 Frame = +1

Query: 517 EEKPSATDA-EGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNP-- 687
           E++   TD  E   + AA  P        AP  E+  A+ P+ + PE  D P  +  P  
Sbjct: 71  EDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEAPEVQDVPDSSGAPDA 130

Query: 688 -VDEDKPADIS-PDAP-KAEAKSADD 756
                + +D S P+ P   EA+ A D
Sbjct: 131 SAQASEASDASAPEVPGSTEAQDAQD 156


>AC025726-22|AAN73851.2|  512|Caenorhabditis elegans Abnormal cell
           lineage protein 65,isoform b protein.
          Length = 512

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
 Frame = +1

Query: 517 EEKPSATDA-EGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNP-- 687
           E++   TD  E   + AA  P        AP  E+  A+ P+ + PE  D P  +  P  
Sbjct: 71  EDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEAPEVQDVPDSSGAPDA 130

Query: 688 -VDEDKPADIS-PDAP-KAEAKSADD 756
                + +D S P+ P   EA+ A D
Sbjct: 131 SAQASEASDASAPEVPGSTEAQDAQD 156


>AC025726-21|AAK73935.3|  728|Caenorhabditis elegans Abnormal cell
           lineage protein 65,isoform a protein.
          Length = 728

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
 Frame = +1

Query: 517 EEKPSATDA-EGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNP-- 687
           E++   TD  E   + AA  P        AP  E+  A+ P+ + PE  D P  +  P  
Sbjct: 71  EDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEAPEVQDVPDSSGAPDA 130

Query: 688 -VDEDKPADIS-PDAP-KAEAKSADD 756
                + +D S P+ P   EA+ A D
Sbjct: 131 SAQASEASDASAPEVPGSTEAQDAQD 156


>AC024807-1|AAF59529.5|  704|Caenorhabditis elegans Hypothetical
           protein Y53G8AL.1 protein.
          Length = 704

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +1

Query: 583 VKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPD 723
           V  +DL  T E+    IPEI TP   D+ +  +N V+  + ++I  D
Sbjct: 289 VPSLDLEETTENPE--IPEISTPREEDSAENLENLVENSEKSEILED 333


>Z50874-10|CAA90770.1|  302|Caenorhabditis elegans Hypothetical
           protein R10E4.11 protein.
          Length = 302

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
 Frame = +1

Query: 499 RR*ISKEEKPSATDAEGSADSA--AIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPK 672
           RR    EE   + D++  AD +  A   + ++++     +     + PEI   +    PK
Sbjct: 69  RRHGGSEESSDSEDSDSVADDSDGATHGSRLEEMQERLKILGSKRSKPEIPIKDLEVVPK 128

Query: 673 LADNPVDEDKPADISPDAPKAEAKS 747
           L +   +ED    I P  PK  A S
Sbjct: 129 LEEEAEEEDMDIQILPSPPKMYACS 153


>U21310-2|AAA62521.1|  322|Caenorhabditis elegans T box family
           protein 11 protein.
          Length = 322

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +1

Query: 514 KEEKPSATDAEGSADSAAIIPNMVKKI-DLAPTVESDAAAIPEIKTPEAADAPKLADNPV 690
           + E+ S   +EG++   +I P   KKI D+AP +  D + I +    ++   P +A+ P 
Sbjct: 188 RRERQSPVYSEGTSSEKSISPPPAKKIKDMAPAL-PDYSVISKPNLLQSLIFPMIAEQPS 246

Query: 691 DEDKP 705
               P
Sbjct: 247 TSQSP 251


>AF078790-10|AAC26931.1|  197|Caenorhabditis elegans Hypothetical
           protein F36H12.5 protein.
          Length = 197

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +1

Query: 565 AIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDED---KPADISPDAPKA 735
           A  PN +  I     V   A+  P    PEA   P+  + P  E    K     PDAPK 
Sbjct: 33  AAAPNPISSISSNSKVAPPASPPPP---PEAEKKPETGEEPKKEKSKMKSEVKEPDAPKK 89

Query: 736 EAKSADD 756
           + K++D+
Sbjct: 90  DDKTSDE 96


>Z96102-2|CAI79216.1|  746|Caenorhabditis elegans Hypothetical
           protein H39E23.3 protein.
          Length = 746

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 23/68 (33%), Positives = 31/68 (45%)
 Frame = +1

Query: 550 SADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPDAP 729
           SADS    P  VK+    P  ES   A  E K P   ++ K      D +K A +  +A 
Sbjct: 238 SADSEKKAP--VKREADKPKTES---ADSEKKAPAKRESDKPKTESADSEKKAPVKREAD 292

Query: 730 KAEAKSAD 753
           K + +SAD
Sbjct: 293 KPKTESAD 300



 Score = 28.3 bits (60), Expect = 6.2
 Identities = 23/68 (33%), Positives = 31/68 (45%)
 Frame = +1

Query: 550 SADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPDAP 729
           SADS    P  VK+    P  ES   A  E K P   ++ K      D +K A +  +A 
Sbjct: 278 SADSEKKAP--VKREADKPKTES---ADSEKKAPAKRESDKPKTESADSEKKAPVKREAD 332

Query: 730 KAEAKSAD 753
           K + +SAD
Sbjct: 333 KPKTESAD 340


>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
           protein Y26D4A.9 protein.
          Length = 1435

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = +2

Query: 398 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEFQKKKNLVLLMQKVL 553
           K SE      K+ D KVE+   + E +K E Q    EFQK+   V  ++K L
Sbjct: 715 KESEEVKKTGKNKD-KVEKTKEEVEKAKEEFQKVKEEFQKEVEKVKKVEKEL 765


>AC006645-9|AAF39841.2|  293|Caenorhabditis elegans Nematode astacin
           protease protein 2 protein.
          Length = 293

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +3

Query: 192 VAPKIDDSVKPTEVAAATEEKKPNL-LQLVTTRYPLYQRPK 311
           VAPK+ +  K  E+A +T+ +K    ++L+ T+ P ++  K
Sbjct: 15  VAPKVLEPEKDDEIAVSTQREKTFFDMKLILTKLPTFEPSK 55


>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 192 protein.
          Length = 2957

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
 Frame = +1

Query: 508 ISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKT-PEAADAPKLADN 684
           + + E+    + E      ++ P  V+        +++   IP + T  E A+ P  A+ 
Sbjct: 734 LDQVEQNDYENIEKEEPQVSVDPEPVEVEAQQEPADTEEYPIPSVGTIEEPAEEP--AEE 791

Query: 685 PVDEDKPADISPDAPKAEAKSADD 756
           PV+E +P D S    ++    ADD
Sbjct: 792 PVEEPEPMDDSSPVDQSTPVKADD 815


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,575,223
Number of Sequences: 27780
Number of extensions: 248366
Number of successful extensions: 1187
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1150
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -