Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20722
(757 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 34 0.095
AC024877-12|AAF60902.1| 128|Caenorhabditis elegans Hypothetical... 32 0.38
Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 31 0.67
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ... 31 1.2
Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical ... 30 1.5
U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical pr... 30 2.0
U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical pr... 30 2.0
AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin p... 30 2.0
AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin p... 30 2.0
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 29 2.7
AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein. 29 2.7
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 29 2.7
AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cel... 29 2.7
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 29 2.7
AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical ... 29 2.7
Z50874-10|CAA90770.1| 302|Caenorhabditis elegans Hypothetical p... 29 3.6
U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family pr... 29 3.6
AF078790-10|AAC26931.1| 197|Caenorhabditis elegans Hypothetical... 29 3.6
Z96102-2|CAI79216.1| 746|Caenorhabditis elegans Hypothetical pr... 28 6.2
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 28 6.2
AC006645-9|AAF39841.2| 293|Caenorhabditis elegans Nematode asta... 28 6.2
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 28 8.2
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 34.3 bits (75), Expect = 0.095
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Frame = +1
Query: 517 EEKPSATDAEGSADS----AAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADN 684
++ P+ D+E +AD ++ P + KK + P S A+P P+ P +
Sbjct: 701 KKAPTKPDSEAAADPVSGPSSKDPKLAKKAPVKPRDPSPMKAVPIKPAPKTEVPPAVVKK 760
Query: 685 PVDEDKPADISPDAPKAEAKS 747
P K D SP KAE S
Sbjct: 761 PEPVAKSRDPSPKKAKAEPNS 781
>AC024877-12|AAF60902.1| 128|Caenorhabditis elegans Hypothetical
protein Y95B8A.2 protein.
Length = 128
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 643 KTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSA 750
K AA P+ A P +ED DI APKA+A++A
Sbjct: 71 KPAPAAAGPRSAPAPTNEDYNTDIDVPAPKAKARAA 106
>Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical
protein Y57G11A.2 protein.
Length = 640
Score = 31.5 bits (68), Expect = 0.67
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 251 EEAEPAPVSNDEVPAIPEAKKDDIAPEDSDI 343
E+ P P +E+P +PE ++ P DS+I
Sbjct: 532 EDTTPGPAVTEEIPEVPEPTEEPPTPTDSEI 562
>Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical
protein Y57G11A.2 protein.
Length = 640
Score = 31.5 bits (68), Expect = 0.67
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 251 EEAEPAPVSNDEVPAIPEAKKDDIAPEDSDI 343
E+ P P +E+P +PE ++ P DS+I
Sbjct: 532 EDTTPGPAVTEEIPEVPEPTEEPPTPTDSEI 562
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 31.5 bits (68), Expect = 0.67
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +1
Query: 601 APTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSA 750
AP ++ A+ P PEAA AP+ P E PA AP A A A
Sbjct: 101 APAAPAEPASAPA-PAPEAAPAPEPTPAPAPEAAPAPAPDAAPTAPAAGA 149
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 31.5 bits (68), Expect = 0.67
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +1
Query: 535 TDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAP-KLADNPVDEDKPAD 711
TD+ SAD+ A + + A + E+ A I +T A P +AD D P+
Sbjct: 334 TDSAASADTTAALVDTSSSEHAAESTEAPATDIAATETTPAPSVPAPVADAAAGYDSPSS 393
Query: 712 ISPDAPKAEAK 744
I + P A+
Sbjct: 394 IPEETPAPAAE 404
Score = 27.9 bits (59), Expect = 8.2
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Frame = +1
Query: 520 EKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADA-PKLADN--PV 690
+ PS+ E A +A P A + A A E PE A A P A P
Sbjct: 389 DSPSSIPEETPAPAAEDTPAPASAA--AEETPAPAPAAEETPAPETASAAPDAAGGAAPA 446
Query: 691 DEDKPADISPDAPK-AEAKSA 750
D PAD++ AP+ + A+SA
Sbjct: 447 DVAAPADVATTAPETSSAQSA 467
>Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical
protein ZC376.8 protein.
Length = 278
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +1
Query: 574 PNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVD-EDKPADISPDAPKAEAKS 747
P K + AP+ ES P K PE AP AD E+K + P+ P KS
Sbjct: 37 PKKKKDVSGAPSAESPPPPPPAPKVPEPPKAPPPADAVKKIEEKGEEKKPEEPAKSKKS 95
>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
protein Y38C9A.1 protein.
Length = 1484
Score = 30.7 bits (66), Expect = 1.2
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 529 SATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAP-KLADNPVDEDKP 705
+A + A S++I PN I AP+ +AA P+I P A AP + D+D+
Sbjct: 1062 TAPTVQAPAPSSSI-PNTSTSIPKAPSAPVLSAAPPKIVAPAAPAAPTHYSPISSDDDEI 1120
Query: 706 ADISPDAPKAEAKSA 750
I P K A SA
Sbjct: 1121 QCIEPPPAKKPAPSA 1135
>Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical
protein B0035.5 protein.
Length = 522
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +1
Query: 520 EKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADN-PVDE 696
EKP++ +AE D + K ++L V A PE PEA+ K + P D
Sbjct: 280 EKPASLNAEDIRDEKVKVLKAAKVVELKDVVVGQYIASPEFDHPEASQGYKDDKSVPADS 339
Query: 697 DKP 705
P
Sbjct: 340 TTP 342
>AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical
protein M70.1 protein.
Length = 931
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +1
Query: 586 KKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAE 738
KK D P+ +P TP+ A P P ++KP D++ + E
Sbjct: 812 KKKDTKPSAPKPKPDVPVNPTPQTAKVPVAPAPPAKDEKPKDVNVKKAETE 862
>U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical
protein PAR2.4b protein.
Length = 606
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 129 VSLAMPVAEEKDVVPAQPILEVAPKIDDSVKPTEVAAAT 245
V++ +PVA EKDV+PA+ +L ++ + PTE A T
Sbjct: 317 VTVVIPVASEKDVLPARKLLARQARL--CLFPTEEARKT 353
>U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical
protein PAR2.4a protein.
Length = 804
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 129 VSLAMPVAEEKDVVPAQPILEVAPKIDDSVKPTEVAAAT 245
V++ +PVA EKDV+PA+ +L ++ + PTE A T
Sbjct: 515 VTVVIPVASEKDVLPARKLLARQARL--CLFPTEEARKT 551
>AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin
polymerizing factor-S protein.
Length = 606
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 129 VSLAMPVAEEKDVVPAQPILEVAPKIDDSVKPTEVAAAT 245
V++ +PVA EKDV+PA+ +L ++ + PTE A T
Sbjct: 317 VTVVIPVASEKDVLPARKLLARQARL--CLFPTEEARKT 353
>AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin
polymerizing factor protein.
Length = 804
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 129 VSLAMPVAEEKDVVPAQPILEVAPKIDDSVKPTEVAAAT 245
V++ +PVA EKDV+PA+ +L ++ + PTE A T
Sbjct: 515 VTVVIPVASEKDVLPARKLLARQARL--CLFPTEEARKT 551
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/79 (26%), Positives = 32/79 (40%)
Frame = +1
Query: 511 SKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPV 690
SK K +A+D + + A + K P E D +KTP+ K A+ P
Sbjct: 218 SKSTKRAASDDDEEEEPVATKKSKKSKRAETPEEEDDEEE-EVVKTPKKTKKSKRAETPE 276
Query: 691 DEDKPADISPDAPKAEAKS 747
+ED+ + PK S
Sbjct: 277 EEDEVEEEVVKTPKKSKSS 295
Score = 27.9 bits (59), Expect = 8.2
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Frame = +1
Query: 511 SKEEKPSATDAEGSADSAAII--PNMVKKIDLAPTVESDAAAIPEI-KTPE---AADAPK 672
SK+ K + T E + ++ P KK A T E + E+ KTP+ ++ +PK
Sbjct: 240 SKKSKRAETPEEEDDEEEEVVKTPKKTKKSKRAETPEEEDEVEEEVVKTPKKSKSSKSPK 299
Query: 673 L---ADNPVDEDKPADISPDAPKAEAK 744
A+ +ED+ + +APK+ K
Sbjct: 300 KSKRAETSDEEDEDEEDEKEAPKSSKK 326
>AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein.
Length = 691
Score = 29.5 bits (63), Expect = 2.7
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Frame = +1
Query: 517 EEKPSATDA-EGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNP-- 687
E++ TD E + AA P AP E+ A+ P+ + PE D P + P
Sbjct: 34 EDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEAPEVQDVPDSSGAPDA 93
Query: 688 -VDEDKPADIS-PDAP-KAEAKSADD 756
+ +D S P+ P EA+ A D
Sbjct: 94 SAQASEASDASAPEVPGSTEAQDAQD 119
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 29.5 bits (63), Expect = 2.7
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Frame = +1
Query: 517 EEKPSATDA-EGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNP-- 687
E++ TD E + AA P AP E+ A+ P+ + PE D P + P
Sbjct: 71 EDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEAPEVQDVPDSSGAPDA 130
Query: 688 -VDEDKPADIS-PDAP-KAEAKSADD 756
+ +D S P+ P EA+ A D
Sbjct: 131 SAQASEASDASAPEVPGSTEAQDAQD 156
>AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform b protein.
Length = 512
Score = 29.5 bits (63), Expect = 2.7
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Frame = +1
Query: 517 EEKPSATDA-EGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNP-- 687
E++ TD E + AA P AP E+ A+ P+ + PE D P + P
Sbjct: 71 EDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEAPEVQDVPDSSGAPDA 130
Query: 688 -VDEDKPADIS-PDAP-KAEAKSADD 756
+ +D S P+ P EA+ A D
Sbjct: 131 SAQASEASDASAPEVPGSTEAQDAQD 156
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 29.5 bits (63), Expect = 2.7
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Frame = +1
Query: 517 EEKPSATDA-EGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNP-- 687
E++ TD E + AA P AP E+ A+ P+ + PE D P + P
Sbjct: 71 EDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEAPEVQDVPDSSGAPDA 130
Query: 688 -VDEDKPADIS-PDAP-KAEAKSADD 756
+ +D S P+ P EA+ A D
Sbjct: 131 SAQASEASDASAPEVPGSTEAQDAQD 156
>AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical
protein Y53G8AL.1 protein.
Length = 704
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 583 VKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPD 723
V +DL T E+ IPEI TP D+ + +N V+ + ++I D
Sbjct: 289 VPSLDLEETTENPE--IPEISTPREEDSAENLENLVENSEKSEILED 333
>Z50874-10|CAA90770.1| 302|Caenorhabditis elegans Hypothetical
protein R10E4.11 protein.
Length = 302
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +1
Query: 499 RR*ISKEEKPSATDAEGSADSA--AIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPK 672
RR EE + D++ AD + A + ++++ + + PEI + PK
Sbjct: 69 RRHGGSEESSDSEDSDSVADDSDGATHGSRLEEMQERLKILGSKRSKPEIPIKDLEVVPK 128
Query: 673 LADNPVDEDKPADISPDAPKAEAKS 747
L + +ED I P PK A S
Sbjct: 129 LEEEAEEEDMDIQILPSPPKMYACS 153
>U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family
protein 11 protein.
Length = 322
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 514 KEEKPSATDAEGSADSAAIIPNMVKKI-DLAPTVESDAAAIPEIKTPEAADAPKLADNPV 690
+ E+ S +EG++ +I P KKI D+AP + D + I + ++ P +A+ P
Sbjct: 188 RRERQSPVYSEGTSSEKSISPPPAKKIKDMAPAL-PDYSVISKPNLLQSLIFPMIAEQPS 246
Query: 691 DEDKP 705
P
Sbjct: 247 TSQSP 251
>AF078790-10|AAC26931.1| 197|Caenorhabditis elegans Hypothetical
protein F36H12.5 protein.
Length = 197
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +1
Query: 565 AIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDED---KPADISPDAPKA 735
A PN + I V A+ P PEA P+ + P E K PDAPK
Sbjct: 33 AAAPNPISSISSNSKVAPPASPPPP---PEAEKKPETGEEPKKEKSKMKSEVKEPDAPKK 89
Query: 736 EAKSADD 756
+ K++D+
Sbjct: 90 DDKTSDE 96
>Z96102-2|CAI79216.1| 746|Caenorhabditis elegans Hypothetical
protein H39E23.3 protein.
Length = 746
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/68 (33%), Positives = 31/68 (45%)
Frame = +1
Query: 550 SADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPDAP 729
SADS P VK+ P ES A E K P ++ K D +K A + +A
Sbjct: 238 SADSEKKAP--VKREADKPKTES---ADSEKKAPAKRESDKPKTESADSEKKAPVKREAD 292
Query: 730 KAEAKSAD 753
K + +SAD
Sbjct: 293 KPKTESAD 300
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/68 (33%), Positives = 31/68 (45%)
Frame = +1
Query: 550 SADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPDAP 729
SADS P VK+ P ES A E K P ++ K D +K A + +A
Sbjct: 278 SADSEKKAP--VKREADKPKTES---ADSEKKAPAKRESDKPKTESADSEKKAPVKREAD 332
Query: 730 KAEAKSAD 753
K + +SAD
Sbjct: 333 KPKTESAD 340
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +2
Query: 398 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEFQKKKNLVLLMQKVL 553
K SE K+ D KVE+ + E +K E Q EFQK+ V ++K L
Sbjct: 715 KESEEVKKTGKNKD-KVEKTKEEVEKAKEEFQKVKEEFQKEVEKVKKVEKEL 765
>AC006645-9|AAF39841.2| 293|Caenorhabditis elegans Nematode astacin
protease protein 2 protein.
Length = 293
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 192 VAPKIDDSVKPTEVAAATEEKKPNL-LQLVTTRYPLYQRPK 311
VAPK+ + K E+A +T+ +K ++L+ T+ P ++ K
Sbjct: 15 VAPKVLEPEKDDEIAVSTQREKTFFDMKLILTKLPTFEPSK 55
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +1
Query: 508 ISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKT-PEAADAPKLADN 684
+ + E+ + E ++ P V+ +++ IP + T E A+ P A+
Sbjct: 734 LDQVEQNDYENIEKEEPQVSVDPEPVEVEAQQEPADTEEYPIPSVGTIEEPAEEP--AEE 791
Query: 685 PVDEDKPADISPDAPKAEAKSADD 756
PV+E +P D S ++ ADD
Sbjct: 792 PVEEPEPMDDSSPVDQSTPVKADD 815
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,575,223
Number of Sequences: 27780
Number of extensions: 248366
Number of successful extensions: 1187
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1150
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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