Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20720
         (745 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    29   0.20 
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    27   0.46 
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     24   4.3  
EF588468-1|ABQ96704.1|  176|Anopheles gambiae transposase protein.     23   7.5  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   7.5  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 28.7 bits (61), Expect = 0.20
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = -1

Query: 718 SLFFLFASSGI*KTILPSAVVSYLAV---CLECS 626
           +L+FLF   G  K  LP++ + Y  V   CLECS
Sbjct: 14  NLYFLFVVRGTGKPFLPTSFLIYCFVSPSCLECS 47


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 27.5 bits (58), Expect = 0.46
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +3

Query: 489  HGHRHLLDFDPATKQARKIQGRLRMCPKYEKSEVPDIIEGVPVCPG 626
            +G   LLD +P +   R   G  R  P+++ S   +   G P  PG
Sbjct: 2453 YGLLKLLDINPHSSLFRSYNGPFRNSPEHKGSSQRNCSRGPPCSPG 2498


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 158 TSPVLPSQYDEEDRFCKRSPQSPKS 232
           T+ V P++YDEE    K S   PK+
Sbjct: 682 TAGVPPARYDEEVYLVKESVAEPKT 706


>EF588468-1|ABQ96704.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 146 RKCPTSPVLPSQYDEEDRFCKRSPQSPKS 232
           RKC ++ +LPS Y++E    K    + K+
Sbjct: 146 RKCLSNALLPSVYNQEFEKAKEKLSTAKA 174


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 589 CRISLREFRCVQGNT 633
           CR+ L+ FR +QG+T
Sbjct: 824 CRVPLQGFRALQGST 838


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,175
Number of Sequences: 2352
Number of extensions: 16538
Number of successful extensions: 63
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)