Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20719
         (388 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    23   0.80 
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    23   0.80 
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    22   1.8  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   1.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   1.8  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   3.2  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   3.2  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   5.6  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   5.6  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   5.6  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   5.6  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    20   7.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       20   9.8  

>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 0.80
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 83  TNCARCVPKDKAIKKFVIRNI 145
           T+CA+C  K K   K VI+++
Sbjct: 72  TSCAKCTDKQKQGAKTVIQHL 92


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 23.4 bits (48), Expect = 0.80
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +2

Query: 83  TNCARCVPKDKAIKKFVIRNIVE 151
           T+C++C  K K    F++R +++
Sbjct: 75  TDCSKCSEKQKEGSDFIMRYLID 97


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +2

Query: 83  TNCARCVPKDKAIKKFVIRNIVE 151
           T+CA+C  K KA  + V+ ++++
Sbjct: 68  TDCAKCNEKVKANVRKVLHHLID 90


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 15/52 (28%), Positives = 27/52 (51%)
 Frame = +2

Query: 113 KAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHTKLSG 268
           K++  FVI  + +A  VR++ +  V    Q  +  + LHY ++     K+SG
Sbjct: 226 KSVDLFVIFPLTKAEKVRNLKEDEVTFSVQKIQELSHLHYKLA-NFTVKISG 276


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 15/52 (28%), Positives = 27/52 (51%)
 Frame = +2

Query: 113 KAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHTKLSG 268
           K++  FVI  + +A  VR++ +  V    Q  +  + LHY ++     K+SG
Sbjct: 182 KSVDLFVIFPLTKAEKVRNLKEDEVTFSVQKIQELSHLHYKLA-NFTVKISG 232


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 279 LRSVPDNFVWMAHDTQ*WSLAYNL 208
           +R   D F++  HDT   S+ Y L
Sbjct: 288 IREEVDTFMFEGHDTTSVSICYTL 311


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 279 LRSVPDNFVWMAHDTQ*WSLAYNL 208
           +R   D F++  HDT   S+ Y L
Sbjct: 288 IREEVDTFMFEGHDTTSVSICYTL 311


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 89  CARCVPKDKAIKKFVIRNIVE 151
           CA+C  K K   + VIR++++
Sbjct: 71  CAKCNEKHKEGVRKVIRHLIK 91


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 6/23 (26%), Positives = 15/23 (65%)
 Frame = +2

Query: 83  TNCARCVPKDKAIKKFVIRNIVE 151
           T+C++C  + K   + +IR +++
Sbjct: 71  TSCSKCSQRQKDGSRTIIRYLIK 93


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = +2

Query: 62  HVKAVRCTNCARCVPKDKAIKKFVIRNIVE 151
           H+     T C++C    K   K ++R++++
Sbjct: 66  HLPDALHTECSKCSETQKNGSKKIMRHLID 95


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 83  TNCARCVPKDK 115
           TNCA+C  K +
Sbjct: 70  TNCAKCTEKQR 80


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 249 STQSCQEQIEERQKNPYSSQ 308
           ST + +  + E +KNPY ++
Sbjct: 95  STATLKAWLNEHKKNPYPTK 114


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 246 PSTQSCQEQIEERQKNPYSSQE 311
           P+ Q  Q+ I ERQ     SQE
Sbjct: 375 PNAQLLQQLIRERQLAVGGSQE 396


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,701
Number of Sequences: 336
Number of extensions: 1635
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8119573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)