Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20718
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           27   0.099
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   6.5  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   6.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   6.5  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   6.5  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   8.6  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   8.6  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   8.6  

>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 27.5 bits (58), Expect = 0.099
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 81  DTGANISVLPVKKNRFYNNKCDDYKLY 1
           DT  N     +++NR+YNN  D Y+ Y
Sbjct: 161 DTTGNSGEGSLQENRYYNNSPDQYQSY 187


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -1

Query: 221 CVEPCSWKKPV 189
           C EP  W KPV
Sbjct: 72  CSEPAIWPKPV 82


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 211 GSTHFLALWRYLK**HIAS 267
           GS  FLA+W YL   +++S
Sbjct: 4   GSFTFLAIWLYLTAIYVSS 22


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 134 LYTAYV*QTILLDLDF*WTRVRIFL 60
           ++ A V QTI L + F WT   +F+
Sbjct: 208 IFKALVLQTINLQITFIWTYNDLFV 232


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 134 LYTAYV*QTILLDLDF*WTRVRIFL 60
           ++ A V QTI L + F WT   +F+
Sbjct: 208 IFKALVLQTINLQITFIWTYNDLFV 232


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +2

Query: 107 LSVIHRRCIGVTVHIPACEYTSVS 178
           L ++HR C G        +YT  S
Sbjct: 7   LGIMHRHCFGYPFQGTTYKYTGCS 30


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 530 VCEAKDLGTC 501
           VC+AKD G+C
Sbjct: 73  VCKAKDEGSC 82


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 530 VCEAKDLGTC 501
           VC+AKD G+C
Sbjct: 73  VCKAKDEGSC 82


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,058
Number of Sequences: 336
Number of extensions: 2493
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)