Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20717
(695 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 137 1e-33
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 130 2e-31
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 114 1e-26
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 113 2e-26
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 91 1e-19
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 55 8e-09
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 46 7e-06
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 31 0.16
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.84
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.6
SPAC1D4.10 |||tRNA endonuclease|Schizosaccharomyces pombe|chr 1|... 27 3.4
SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1 |Schizosacch... 25 7.8
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 7.8
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 25 7.8
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 137 bits (332), Expect = 1e-33
Identities = 63/89 (70%), Positives = 73/89 (82%)
Frame = +1
Query: 256 KRLIGRKFEDATVQADMKHWPFXVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKET 435
KRLIGRKF+D VQ+DMKHWPF V+S GKP ++V YKGE KTF PEE+SSMVL KM+ET
Sbjct: 69 KRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLMKMRET 128
Query: 436 AEAYLGKTVQNAVITVPAYFNDSQNKPQK 522
AEAYLG V +AV+TVPAYFNDSQ + K
Sbjct: 129 AEAYLGGKVTDAVVTVPAYFNDSQRQATK 157
Score = 125 bits (301), Expect = 7e-30
Identities = 57/65 (87%), Positives = 62/65 (95%)
Frame = +2
Query: 62 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 241
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 242 TIFDA 256
TIFDA
Sbjct: 64 TIFDA 68
Score = 112 bits (270), Expect = 4e-26
Identities = 53/63 (84%), Positives = 58/63 (92%)
Frame = +3
Query: 507 KQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 686
+QATKDAG I+GLNVLRIINEPTAAAIAYGLD+ GE NVLIFDLGGGTFDVS+LTIE+
Sbjct: 153 RQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLGGGTFDVSLLTIEE 212
Query: 687 GIF 695
GIF
Sbjct: 213 GIF 215
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 130 bits (313), Expect = 2e-31
Identities = 59/89 (66%), Positives = 71/89 (79%)
Frame = +1
Query: 256 KRLIGRKFEDATVQADMKHWPFXVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKET 435
KRLIGR+F D VQ+DMKHWPF V+ GKP I+V +KGE KTF PEE+SSMVL KM+E+
Sbjct: 69 KRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLLKMRES 128
Query: 436 AEAYLGKTVQNAVITVPAYFNDSQNKPQK 522
AEA+LG V +AV+TVPAYFNDSQ + K
Sbjct: 129 AEAFLGGKVTDAVVTVPAYFNDSQRQATK 157
Score = 125 bits (301), Expect = 7e-30
Identities = 57/65 (87%), Positives = 62/65 (95%)
Frame = +2
Query: 62 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 241
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 242 TIFDA 256
TIFDA
Sbjct: 64 TIFDA 68
Score = 109 bits (262), Expect = 4e-25
Identities = 52/63 (82%), Positives = 57/63 (90%)
Frame = +3
Query: 507 KQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 686
+QATKDAG I+GLNVLRIINEPTAAAIAYGLD+ E NVLIFDLGGGTFDVS+LTIE+
Sbjct: 153 RQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGGGTFDVSLLTIEE 212
Query: 687 GIF 695
GIF
Sbjct: 213 GIF 215
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 114 bits (274), Expect = 1e-26
Identities = 54/97 (55%), Positives = 67/97 (69%)
Frame = +1
Query: 232 PQQHNIRCKRLIGRKFEDATVQADMKHWPFXVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 411
P+ KRLIGR++ED Q D+KHWPF V+ + G P I+V Y GE K F +E+S+M
Sbjct: 65 PRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAM 124
Query: 412 VLTKMKETAEAYLGKTVQNAVITVPAYFNDSQNKPQK 522
VLTKMKE +EA L K V+ AVITVPAYF+DSQ K
Sbjct: 125 VLTKMKEISEAKLNKRVEKAVITVPAYFSDSQRAATK 161
Score = 112 bits (269), Expect = 5e-26
Identities = 50/65 (76%), Positives = 57/65 (87%)
Frame = +2
Query: 62 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 241
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 242 TIFDA 256
T+FDA
Sbjct: 68 TVFDA 72
Score = 101 bits (243), Expect = 7e-23
Identities = 48/63 (76%), Positives = 54/63 (85%)
Frame = +3
Query: 507 KQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 686
+ ATKDAG I+GLNVLRIINEPTAAAIAYGLD K +NVLIFDLGGGTFDVS+L I+
Sbjct: 157 RAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLGGGTFDVSLLKIQG 216
Query: 687 GIF 695
G+F
Sbjct: 217 GVF 219
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 113 bits (272), Expect = 2e-26
Identities = 51/97 (52%), Positives = 72/97 (74%)
Frame = +1
Query: 232 PQQHNIRCKRLIGRKFEDATVQADMKHWPFXVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 411
P+ KRLIGRKF++ T+ D+K +PF +V+D +P ++V G+ K F PEE+S+M
Sbjct: 94 PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAM 153
Query: 412 VLTKMKETAEAYLGKTVQNAVITVPAYFNDSQNKPQK 522
+L+KMK+TAEAYLGK V +AV+TVPAYFND+Q + K
Sbjct: 154 ILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATK 190
Score = 109 bits (261), Expect = 5e-25
Identities = 48/63 (76%), Positives = 55/63 (87%)
Frame = +2
Query: 65 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 244
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NT
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 245 IFD 253
IFD
Sbjct: 98 IFD 100
Score = 102 bits (244), Expect = 6e-23
Identities = 45/63 (71%), Positives = 60/63 (95%)
Frame = +3
Query: 507 KQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 686
+QATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK T E++++++DLGGGTFDVS+L+I++
Sbjct: 186 RQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIVVYDLGGGTFDVSLLSIDN 244
Query: 687 GIF 695
G+F
Sbjct: 245 GVF 247
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 91.5 bits (217), Expect = 1e-19
Identities = 42/63 (66%), Positives = 53/63 (84%)
Frame = +3
Query: 507 KQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 686
+QATK AG I+GLNVLR++NEPTAAA+AYGLDKK + V +FDLGGGTFD+SIL + +
Sbjct: 199 RQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK--NDAIVAVFDLGGGTFDISILELNN 256
Query: 687 GIF 695
G+F
Sbjct: 257 GVF 259
Score = 87.8 bits (208), Expect = 1e-18
Identities = 42/97 (43%), Positives = 59/97 (60%)
Frame = +1
Query: 232 PQQHNIRCKRLIGRKFEDATVQADMKHWPFXVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 411
P+ KRLIGR+F++ VQ D+K P+ +V + KT+ P ++
Sbjct: 110 PENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGGF 166
Query: 412 VLTKMKETAEAYLGKTVQNAVITVPAYFNDSQNKPQK 522
+L+KM+ETA YLGK V+NAV+TVPAYFNDSQ + K
Sbjct: 167 ILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATK 203
Score = 79.8 bits (188), Expect = 3e-16
Identities = 37/67 (55%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Frame = +2
Query: 53 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 229
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 230 NPNNTIF 250
NP NT F
Sbjct: 109 NPENTFF 115
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 55.2 bits (127), Expect = 8e-09
Identities = 23/66 (34%), Positives = 42/66 (63%)
Frame = +2
Query: 50 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 229
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 230 NPNNTI 247
N NT+
Sbjct: 63 NFRNTV 68
Score = 47.6 bits (108), Expect = 2e-06
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Frame = +3
Query: 501 LSKQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----RNVLIFDLGGGTFDVS 668
+ ++A +A I+GLN LR++N+ AAA+ YG+ K E R V I D G + VS
Sbjct: 155 IQRRALLEAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVAIVDFGHSNYSVS 214
Query: 669 ILTIEDGIF 695
I+ G F
Sbjct: 215 IVEFSRGQF 223
Score = 45.2 bits (102), Expect = 9e-06
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 KRLIGRKFEDATVQADMKHWPFXVVSD-GGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKE 432
KRL GR ++D ++ ++ +++ G KV Y E+ F ++ + TK+K
Sbjct: 72 KRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLIAAYFTKIKA 131
Query: 433 TAEAYLGKTVQNAVITVPAYFNDSQNK 513
AEA L +V + VI++PA+F D Q +
Sbjct: 132 IAEAELIGSVSDVVISIPAWFTDIQRR 158
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 45.6 bits (103), Expect = 7e-06
Identities = 18/61 (29%), Positives = 35/61 (57%)
Frame = +2
Query: 65 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 244
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N +N+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS 86
Query: 245 I 247
+
Sbjct: 87 V 87
Score = 39.5 bits (88), Expect = 4e-04
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +1
Query: 373 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQNK 513
++K E S L ++ E+AE +LG V V++VP YF D+Q K
Sbjct: 134 KEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRK 180
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 31.1 bits (67), Expect = 0.16
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 65 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 241
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P +
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAH 84
Query: 242 TI 247
+I
Sbjct: 85 SI 86
Score = 29.9 bits (64), Expect = 0.36
Identities = 21/92 (22%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +1
Query: 241 HNIR-CKRLIGRK-FEDATVQADMKHWPFXVVSDGGKPKIKVAYK-GEDKTFFPEEVSSM 411
H+IR K L+ E VQ +P + + + +++ +++ + EE+ +M
Sbjct: 84 HSIRNVKELLDTAGLESVLVQKYQSSYPAIQLVENEETTSGISFVISDEENYSLEEIIAM 143
Query: 412 VLTKMKETAEAYLGKTVQNAVITVPAYFNDSQ 507
+ AE + + + V+TVP +FN+ Q
Sbjct: 144 TMEHYISLAEEMAHEKITDLVLTVPPHFNELQ 175
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.84
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 57 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 152
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 2.6
Identities = 28/126 (22%), Positives = 52/126 (41%)
Frame = -1
Query: 653 TAAEVKDKYISFSSTLFVKTVSNRSSSRFIDDSENVQARDGTCIFCGLF*ESLKYAGTVI 474
+++ + + S SS L T S S+S I S + F S + I
Sbjct: 565 SSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSST------SSTFSSASTSSPSSISSSI 618
Query: 473 TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSAC 294
++ T+L + S + +S+ + S +LSS + + + SL+T S+
Sbjct: 619 SSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSIST---IPISSSLSTYSSSVIPSSS 675
Query: 293 TVASSN 276
T+ SS+
Sbjct: 676 TLVSSS 681
>SPAC1D4.10 |||tRNA endonuclease|Schizosaccharomyces pombe|chr
1|||Manual
Length = 809
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -1
Query: 599 KTVSNRSSSRFIDDSENVQARDGTCIFC-GLF*ESLKY 489
KTV+ R++ F +V +RD +CI C LF +S +Y
Sbjct: 3 KTVNFRATKNFYLQFVSVSSRDTSCIPCIHLFFDSKRY 40
>SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1327
Score = 25.4 bits (53), Expect = 7.8
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +2
Query: 188 ERLIGDAAKNQVAMNPNNTIFDANVSS 268
+ LIG++ +++ PN+T +D +VS+
Sbjct: 383 QHLIGESFDGNISLEPNSTEWDDDVSA 409
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 7.8
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +1
Query: 43 QNGKSTRSRNRSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPG 222
+NGK T +R +S + W P++E R G D + V R + + +EP
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE----RSSNGNSDSASPPPVPRLSITRSQVSREP- 531
Query: 223 GDEPQQ 240
++P++
Sbjct: 532 -EKPEE 536
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 7.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -1
Query: 143 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCI 39
G W SP S + H ++++ +F +RVL C+
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCM 310
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,969,922
Number of Sequences: 5004
Number of extensions: 62606
Number of successful extensions: 232
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 321151040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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