Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20717
(695 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 144 8e-35
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 142 2e-34
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 139 2e-33
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 116 2e-26
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 79 3e-15
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 6e-14
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 64 1e-10
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 6e-04
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.89
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 2.7
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 3.6
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 3.6
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 29 4.8
SB_2538| Best HMM Match : YTV (HMM E-Value=0.0015) 29 4.8
SB_47707| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 28 6.3
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_43313| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 28 8.3
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 144 bits (348), Expect = 8e-35
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +2
Query: 47 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 226
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 227 MNPNNTIFDA 256
MNP NT+FDA
Sbjct: 61 MNPENTVFDA 70
Score = 136 bits (329), Expect = 2e-32
Identities = 62/97 (63%), Positives = 75/97 (77%)
Frame = +1
Query: 232 PQQHNIRCKRLIGRKFEDATVQADMKHWPFXVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 411
P+ KRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 412 VLTKMKETAEAYLGKTVQNAVITVPAYFNDSQNKPQK 522
VLTKMKETAEAYLG V +AV+TVPAYF+DSQ + K
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATK 159
Score = 116 bits (279), Expect = 2e-26
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = +3
Query: 507 KQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 686
+QATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+DLGGGTFDVS+LTIED
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVLTIED 214
Query: 687 GIF 695
GIF
Sbjct: 215 GIF 217
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 142 bits (345), Expect = 2e-34
Identities = 65/70 (92%), Positives = 67/70 (95%)
Frame = +2
Query: 47 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 226
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 227 MNPNNTIFDA 256
MNP NTIFDA
Sbjct: 61 MNPTNTIFDA 70
Score = 115 bits (277), Expect = 3e-26
Identities = 56/63 (88%), Positives = 59/63 (93%)
Frame = +3
Query: 507 KQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 686
+QATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIFDLGGGTFDVS+L+IED
Sbjct: 248 RQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIED 307
Query: 687 GIF 695
GIF
Sbjct: 308 GIF 310
Score = 112 bits (269), Expect = 3e-25
Identities = 63/114 (55%), Positives = 73/114 (64%), Gaps = 25/114 (21%)
Frame = +1
Query: 256 KRLIGRKFEDATVQADMKHWPFXVVSDGGKPKIKVAYKGEDKTFFPEEV----------- 402
KRLIGR+F+D V+ DMKHW F VV++ G+PK+KV YKGE KTFF EEV
Sbjct: 71 KRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNEAGRPKVKV 130
Query: 403 --------------SSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQNKPQK 522
SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQ + K
Sbjct: 131 EYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATK 184
Score = 64.5 bits (150), Expect = 8e-11
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +1
Query: 397 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQNKPQK 522
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQ + K
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATK 252
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 139 bits (337), Expect = 2e-33
Identities = 63/70 (90%), Positives = 67/70 (95%)
Frame = +2
Query: 47 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 226
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 227 MNPNNTIFDA 256
+NP NTIFDA
Sbjct: 61 LNPENTIFDA 70
Score = 138 bits (335), Expect = 3e-33
Identities = 65/97 (67%), Positives = 77/97 (79%)
Frame = +1
Query: 232 PQQHNIRCKRLIGRKFEDATVQADMKHWPFXVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 411
P+ KRLIGR+++DATVQ+DMK WPF ++SD KPKI+V YKGE KTF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 412 VLTKMKETAEAYLGKTVQNAVITVPAYFNDSQNKPQK 522
VL KMKETAEAYLG+ V +AVITVPAYFNDSQ + K
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATK 159
Score = 112 bits (270), Expect = 2e-25
Identities = 52/61 (85%), Positives = 59/61 (96%)
Frame = +3
Query: 507 KQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 686
+QATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIFDLGGGTFDVSILTI+D
Sbjct: 155 RQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVSILTIDD 214
Query: 687 G 689
G
Sbjct: 215 G 215
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 116 bits (279), Expect = 2e-26
Identities = 56/97 (57%), Positives = 70/97 (72%)
Frame = +1
Query: 232 PQQHNIRCKRLIGRKFEDATVQADMKHWPFXVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 411
P+ KRLIGR ++D +VQ D+K +PF VV KP ++V K E KTF EE+S+M
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 412 VLTKMKETAEAYLGKTVQNAVITVPAYFNDSQNKPQK 522
VLTKMKETAEAYLGK V +AV+TVPAYFND+Q + K
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATK 857
Score = 111 bits (268), Expect = 4e-25
Identities = 51/65 (78%), Positives = 58/65 (89%), Gaps = 1/65 (1%)
Frame = +2
Query: 65 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 241
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 242 TIFDA 256
T+FDA
Sbjct: 764 TVFDA 768
Score = 106 bits (254), Expect = 2e-23
Identities = 48/63 (76%), Positives = 59/63 (93%)
Frame = +3
Query: 507 KQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 686
+QATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+FDLGGGTFDVS+LTI++
Sbjct: 853 RQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDVSLLTIDN 911
Query: 687 GIF 695
G+F
Sbjct: 912 GVF 914
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 79.4 bits (187), Expect = 3e-15
Identities = 37/63 (58%), Positives = 49/63 (77%)
Frame = +3
Query: 507 KQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 686
+ AT A +++G+ VLR+INEPTAAA+AYGL KK G NV++ DLGGGT DVS+L I+
Sbjct: 185 RNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGTLDVSLLNIQG 243
Query: 687 GIF 695
G+F
Sbjct: 244 GMF 246
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/70 (48%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Frame = +2
Query: 53 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 226
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 227 MNPNNTIFDA 256
+NP NTI+DA
Sbjct: 90 INPKNTIYDA 99
Score = 48.0 bits (109), Expect = 7e-06
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Frame = +1
Query: 256 KRLIGRKFEDATVQADMKHWPFXVVSDG-GKPKIKVAYKGEDKTFFPEEVSSMVLTKMKE 432
KR IG+ F + K + F V +D G V KG PEE+ V+ K++
Sbjct: 100 KRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGGYVIKKLRT 159
Query: 433 TAEAYLGKTVQNAVITVPAYFNDSQNKPQKMQVPSLA 543
AE L TV AV++VPA F D + + ++ SLA
Sbjct: 160 MAERNLTTTVTKAVMSVPAEF-DIKQRNATVKAASLA 195
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 74.9 bits (176), Expect = 6e-14
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 KRLIGRKFEDATVQADMKHWPFXVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKE 432
KR IGRKF D VQ ++ H P+ VV I+V Y G+ + F PE+V +M+ T++K
Sbjct: 127 KRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAMLFTRLKT 186
Query: 433 TAEAYLGKTVQNAVITVPAYFNDSQNK 513
TAE L V + VI+VP+Y+ D Q +
Sbjct: 187 TAEIALKTKVTDCVISVPSYYTDRQRR 213
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +2
Query: 65 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 220
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +3
Query: 522 DAGTISGLNVLRIINEPTAAAIAYGLDKKG---TGERNVLIFDLGGGTFDVSILTIEDG 689
DA +GLN LR++N+ TA ++AYG+ K+ RNV+ D+G + V I G
Sbjct: 217 DASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVFVDIGHSSLQVCITAFLKG 275
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 64.1 bits (149), Expect = 1e-10
Identities = 29/57 (50%), Positives = 43/57 (75%)
Frame = +1
Query: 352 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQNKPQK 522
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+Q + K
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATK 58
Score = 44.4 bits (100), Expect = 9e-05
Identities = 34/66 (51%), Positives = 37/66 (56%), Gaps = 26/66 (39%)
Frame = +3
Query: 507 KQATKDAGTISGLNVL------------------------RIINEPTAAAIAYGLDKK-- 608
+QATKDAGTI+GL+VL RIINEPTAAAIAYGLDK
Sbjct: 54 RQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKARG 113
Query: 609 GTGERN 626
G ERN
Sbjct: 114 GKAERN 119
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +1
Query: 346 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQNK 513
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +FN ++ +
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERR 122
Score = 35.9 bits (79), Expect = 0.031
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Frame = +3
Query: 507 KQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLGGGTFDVSIL 674
++A A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G + +I+
Sbjct: 121 RRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASSTVATIV 180
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 116 GKVEIIANDQGNRTTPSYVAFTDTERLI 199
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +3
Query: 627 VLIFDLGGGTFDVSILTIEDGIF 695
+ ++DLGGGTFD+SIL I+ G+F
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVF 24
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.89
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +2
Query: 125 EIIANDQGNRTTPSYVAFT-DTERL 196
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 233 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 135
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 3.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 251 RILCCWGSSPPGSWRH 204
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 3.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 251 RILCCWGSSPPGSWRH 204
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 627 VLIFDLGGGTFDVSILTIEDGIF 695
V I+DLG GT++++IL E G++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVY 341
>SB_2538| Best HMM Match : YTV (HMM E-Value=0.0015)
Length = 779
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/72 (25%), Positives = 37/72 (51%)
Frame = +2
Query: 59 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 238
P G+DL G+FQ GK+++ + + +++A + +GDAAK ++ +
Sbjct: 547 PTGGLDLS------GMFQ-GKIQVASTAESEAGRKAFLAECERNPNLGDAAKMKLESCLS 599
Query: 239 NTIFDANVSSDV 274
+ + AN+ D+
Sbjct: 600 DLVSTANIFKDL 611
>SB_47707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 627
Score = 28.3 bits (60), Expect = 6.3
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +3
Query: 411 GAYENEG-NCRSLSWQNCAECSYHGSRVLQ*LSKQAT--KDAGTISGLNVLRIINEPTAA 581
GA +N + SL W C + YHG +V++ A AG S NV+R + P A
Sbjct: 512 GATQNANESLNSLVWARCPKHKYHGYKVIRCAVAAAVCHFHAGASSRENVMRRLCVP-AG 570
Query: 582 AIAYGLDKKGTG 617
G K TG
Sbjct: 571 HTQEGHPSKRTG 582
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 633 IFDLGGGTFDVSILTIEDGIF 695
+FDLG G+++V L +E G++
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVY 331
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -1
Query: 440 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRP 267
S F+F ST + +S +KV+ SPL + + P+ G S C V + + P
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNVQNLSRCP 1165
>SB_43313| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +2
Query: 119 KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDANVSSD 271
K + G+ + A ++L+ + MNPNN +D +VSS+
Sbjct: 54 KASVGERQSGSCGYSTQAARAGLDKLLDEVKSTYYKMNPNNIAYDPDVSSE 104
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -1
Query: 635 DKYISFSSTLFVKTVSNRSSSRFIDDSEN 549
+K ISF +LF+ VSN S+ R+I +E+
Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICIAES 780
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,224,239
Number of Sequences: 59808
Number of extensions: 521460
Number of successful extensions: 1765
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1758
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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